| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118168
Identifier: 197118168
GI number: 197118168
Start: 2058344
End: 2059474
Strand: Direct
Name: 197118168
Synonym: Gbem_1783
Alternate gene names: NA
Gene position: 2058344-2059474 (Clockwise)
Preceding gene: 308535264
Following gene: 197118169
Centisome position: 44.6
GC content: 64.99
Gene sequence:
>1131_bases TTGGCTGCATCTGCGATCGACATAGAGGTGGTTTCCGACCACGGCCGTTTCCTGGAGCTAAAGCCTGAGTGGGACCTGCT CCTGGCGCAGCTAGGCGACCAGGCCTCCGTGTTCCTGAGTCACTACTGGCTTGACTGCTGGTGGCGGCACTTCGGCGGCG ACGCCAAGCTGCACCTGCTGGTGCTGCGCCGCGAGGGGAGGATGATCGCCATCGCCCCGCTGATGCGGCGGCGCCTTTCC CTGTACGGCCTTCCGGTTCGCTGCCTCTGTTTTCCGGAAAACGGCAACACCCTGCACAGCGACCTCCTGGTCGGCGAGGC CGAGCGCGGAGAGTCTCTGACGGAGCTTCTATCCTATCTGGACCGGAACCGGCGGGAGTGGGACCTGGTCCACCTGCACC GGATGCCGGGGGACTCTCCCAATCTGGCGGTCGCCCTGAACCTGCTCCGGGAGACGGGGGTGAAGCACCACCTGCGCAGC GTCTACGCCTCGCCCTACCTCAAAGTGGCGGGGGGGTGGCAGGCGTTCCATGCGGGGCGGAGCGTAAGGGTTCGCAAGAC CCTGCGCAACGTAAGGAACAGCCTGGAGCGCGCTGCATGCCCAGACCTCGTGCGGGTGGCGACCTGGGAGGAATTTCTGG AGCAACGGGAAGCCATCTGCCGGATCGCCAGCCACAGCTGGACCGAGGAGGAGGGGGACTCCCTGGCCACCCCGGTCAAC CGCGCCTTCTTCGAGGACCTGGCCCGGGAGGCGGCCCGGGAAGGAGGGCTGCGGGTTTGGCTCCTCCTTCTGGACGGTCG CCCCGCCGCCTTCGAGTTCCACCTGCGCGGCTTCGGCAAGCAGCATGCGCTGAGAGCCTCGTTCGACGAGGAGTTTGCCT CCCTTTCTCCCGGCGCGTTCCTGGAGATGGAGCTGCTCAGGGAGATTTACGATGAACCGCAGGGGGTTGCGCACTTCGAT TTCGGTGGGAGCACCGACCCCTACAAGAAGCGCTGGAGCGATCAGGCCCGGGAACTGGTCCTGTTACAGTTGTTCAACGC GGAGCCTTATTCCAGGCTTTGCTCGCTTTACGCCACGTTGCTGATACCGCTTCTGCGCCAGGTGCGCGACCTGTTAAGGA GAAAGGGATGA
Upstream 100 bases:
>100_bases CTACTTCAGGCTCAACACGGCGGGCGTGCTGAGCCCGTTCCGGAAATGGCGCTGCATGGACCGCCAGCAGTAACAAGGCC CCTGACGCGGAGGAAGCGAT
Downstream 100 bases:
>100_bases AAGATTTGCGGGTGGTACTGGTGGTGTCGACGGATCCCTCCGACCTCTTCTTCGCAAACCAGCTGGCCAGGCGCCTTTGC GCCGTTGCGGTAGTGGTGGA
Product: FemAB superfamily protein
Products: NA
Alternate protein names: Cellulose Biosynthesis Protein CelD; Protein Involved In Cellulose Biosynthesis-Like Protein; Cellulose Biosynthesis Protein; FemAB Superfamily Protein
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MAASAIDIEVVSDHGRFLELKPEWDLLLAQLGDQASVFLSHYWLDCWWRHFGGDAKLHLLVLRREGRMIAIAPLMRRRLS LYGLPVRCLCFPENGNTLHSDLLVGEAERGESLTELLSYLDRNRREWDLVHLHRMPGDSPNLAVALNLLRETGVKHHLRS VYASPYLKVAGGWQAFHAGRSVRVRKTLRNVRNSLERAACPDLVRVATWEEFLEQREAICRIASHSWTEEEGDSLATPVN RAFFEDLAREAAREGGLRVWLLLLDGRPAAFEFHLRGFGKQHALRASFDEEFASLSPGAFLEMELLREIYDEPQGVAHFD FGGSTDPYKKRWSDQARELVLLQLFNAEPYSRLCSLYATLLIPLLRQVRDLLRRKG
Sequences:
>Translated_376_residues MAASAIDIEVVSDHGRFLELKPEWDLLLAQLGDQASVFLSHYWLDCWWRHFGGDAKLHLLVLRREGRMIAIAPLMRRRLS LYGLPVRCLCFPENGNTLHSDLLVGEAERGESLTELLSYLDRNRREWDLVHLHRMPGDSPNLAVALNLLRETGVKHHLRS VYASPYLKVAGGWQAFHAGRSVRVRKTLRNVRNSLERAACPDLVRVATWEEFLEQREAICRIASHSWTEEEGDSLATPVN RAFFEDLAREAAREGGLRVWLLLLDGRPAAFEFHLRGFGKQHALRASFDEEFASLSPGAFLEMELLREIYDEPQGVAHFD FGGSTDPYKKRWSDQARELVLLQLFNAEPYSRLCSLYATLLIPLLRQVRDLLRRKG >Mature_375_residues AASAIDIEVVSDHGRFLELKPEWDLLLAQLGDQASVFLSHYWLDCWWRHFGGDAKLHLLVLRREGRMIAIAPLMRRRLSL YGLPVRCLCFPENGNTLHSDLLVGEAERGESLTELLSYLDRNRREWDLVHLHRMPGDSPNLAVALNLLRETGVKHHLRSV YASPYLKVAGGWQAFHAGRSVRVRKTLRNVRNSLERAACPDLVRVATWEEFLEQREAICRIASHSWTEEEGDSLATPVNR AFFEDLAREAAREGGLRVWLLLLDGRPAAFEFHLRGFGKQHALRASFDEEFASLSPGAFLEMELLREIYDEPQGVAHFDF GGSTDPYKKRWSDQARELVLLQLFNAEPYSRLCSLYATLLIPLLRQVRDLLRRKG
Specific function: Unknown
COG id: COG5653
COG function: function code M; Protein involved in cellulose biosynthesis (CelD)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43105; Mature: 42974
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASAIDIEVVSDHGRFLELKPEWDLLLAQLGDQASVFLSHYWLDCWWRHFGGDAKLHLL CCCCEEEEEEEECCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEE VLRREGRMIAIAPLMRRRLSLYGLPVRCLCFPENGNTLHSDLLVGEAERGESLTELLSYL EEECCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCCEEHHHHEECCCCCCHHHHHHHHHH DRNRREWDLVHLHRMPGDSPNLAVALNLLRETGVKHHLRSVYASPYLKVAGGWQAFHAGR HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCC SVRVRKTLRNVRNSLERAACPDLVRVATWEEFLEQREAICRIASHSWTEEEGDSLATPVN CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH RAFFEDLAREAAREGGLRVWLLLLDGRPAAFEFHLRGFGKQHALRASFDEEFASLSPGAF HHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCH LEMELLREIYDEPQGVAHFDFGGSTDPYKKRWSDQARELVLLQLFNAEPYSRLCSLYATL HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LIPLLRQVRDLLRRKG HHHHHHHHHHHHHHCC >Mature Secondary Structure AASAIDIEVVSDHGRFLELKPEWDLLLAQLGDQASVFLSHYWLDCWWRHFGGDAKLHLL CCCEEEEEEEECCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEE VLRREGRMIAIAPLMRRRLSLYGLPVRCLCFPENGNTLHSDLLVGEAERGESLTELLSYL EEECCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCCEEHHHHEECCCCCCHHHHHHHHHH DRNRREWDLVHLHRMPGDSPNLAVALNLLRETGVKHHLRSVYASPYLKVAGGWQAFHAGR HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCC SVRVRKTLRNVRNSLERAACPDLVRVATWEEFLEQREAICRIASHSWTEEEGDSLATPVN CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH RAFFEDLAREAAREGGLRVWLLLLDGRPAAFEFHLRGFGKQHALRASFDEEFASLSPGAF HHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCH LEMELLREIYDEPQGVAHFDFGGSTDPYKKRWSDQARELVLLQLFNAEPYSRLCSLYATL HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LIPLLRQVRDLLRRKG HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA