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The map label for this gene is ycdR [C]

Identifier: 308535264

GI number: 308535264

Start: 2057260

End: 2057649

Strand: Direct

Name: ycdR [C]

Synonym: NA

Alternate gene names: 308535264

Gene position: 2057260-2057649 (Clockwise)

Preceding gene: 197118166

Following gene: 197118168

Centisome position: 44.58

GC content: 60.0

Gene sequence:

>390_bases
ATGGATGCTGTCCGGGAAATGGTTAAGAAAATATTGGCCAAGGCGCTAGTCCTTTCCTGTGCCGACGTACTTTTTCGCCA
TTTGAACCGAGAGCGGCTCCTGGTGGTCATGTACCACGGCGTGACCACGGAAAGCTATACGCCAGCGGTCTGGACCCAGC
TCCCCCTGCCGATGTTCCGCAGCCAACTCGAGTTTTTGAGCAAGCACTACCGGTTCGTCACCCTGCAGCAGGTGATACGG
GCGCTGGACAGGGGGGAGCCCCTGCCGGAGCGCGCCGCGCTGATCACCTTCGACGACGGGTTGAAGAACAACTACTCGGT
CGCCTACCCGGTACTCAAGGAGCTGGGGATTCCCGCCGCCATCTTCCTCACCGTCAACATGATCGGGGGG

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Xylanase/Chitin Deacetilase; Xylanase/Chitin Deacetylase

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:
NA

Sequences:

>Translated_130_residues
MDAVREMVKKILAKALVLSCADVLFRHLNRERLLVVMYHGVTTESYTPAVWTQLPLPMFRSQLEFLSKHYRFVTLQQVIR
ALDRGEPLPERAALITFDDGLKNNYSVAYPVLKELGIPAAIFLTVNMIGG
>Mature_130_residues
MDAVREMVKKILAKALVLSCADVLFRHLNRERLLVVMYHGVTTESYTPAVWTQLPLPMFRSQLEFLSKHYRFVTLQQVIR
ALDRGEPLPERAALITFDDGLKNNYSVAYPVLKELGIPAAIFLTVNMIGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14762; Mature: 14762

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAVREMVKKILAKALVLSCADVLFRHLNRERLLVVMYHGVTTESYTPAVWTQLPLPMFR
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHCCHHHHH
SQLEFLSKHYRFVTLQQVIRALDRGEPLPERAALITFDDGLKNNYSVAYPVLKELGIPAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEE
IFLTVNMIGG
EHHEEECCCC
>Mature Secondary Structure
MDAVREMVKKILAKALVLSCADVLFRHLNRERLLVVMYHGVTTESYTPAVWTQLPLPMFR
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHCCHHHHH
SQLEFLSKHYRFVTLQQVIRALDRGEPLPERAALITFDDGLKNNYSVAYPVLKELGIPAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEE
IFLTVNMIGG
EHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA