| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is exeA [H]
Identifier: 197118157
GI number: 197118157
Start: 2043420
End: 2044538
Strand: Direct
Name: exeA [H]
Synonym: Gbem_1772
Alternate gene names: 197118157
Gene position: 2043420-2044538 (Clockwise)
Preceding gene: 197118156
Following gene: 197118158
Centisome position: 44.28
GC content: 61.39
Gene sequence:
>1119_bases ATGTACGAAACATTTTTCCAGCTGCAAAAAAAGCCGTTCGAGCTCATCCCCGACCCGGATTTCATCTACCTGAGCCGGTC GCACAAAAAGGCGCTCACCTACCTCGACTACGGCATCAGGGAGCGGGTGGGTTTCATCCTGCTCACCGGGGAGGTAGGAT CCGGCAAGACCACCATCATCAGGGATCTCCTGAACAAGCGCTACGAGCGCGTGGTGCTGGCGAAGATCTTCAACACCCGG GTCAACTCGGAACAGCTGCTCGCCATGATCAACGACGATTTCGGGCTCCCCGTCGCCGGCAAGGACAAGATCTCCCTGCT GCGCGAGCTGAACGATTTCCTCCTGGAGCAGTACGCCCTGGGGAACCATCCCATGCTGATCATCGACGAGGCGCAGAACC TTGCAGCTGACCTCTTGGAGGAGATCAGGATGCTCTCCAACCTGGAGAGCGCCCACGGCAAGCTTTTGCAGATCGTGCTG GTGGGGCAGCCGGAGCTGCGCGAAACGCTGGCAAGGCCCGAGCTTTTGCAGCTTAGGCAGCGCATCAGCATCAACTGCCA TTTAAAAGCGCTCTCCCTGGACGAGATGTCCGAGTACATCGAGCACCGCATGACGGTGGCGGGAAACAAAGAGGCCCTCA GCTTCCCGCCGGGGACCCTCGACCTCGTCTACCAGTTCAGCCGCGGCATTCCCCGCCTGGTCAATATCATCTGCGACTTC CTGATGCTCTCCGCCTTCGCCGAGGAGAGCACCGTAGCCTCGGTCGAGATGGCACGCGATGTCTTAGGCGACCTGGAGTT CGAGCAGCATTTTTGGGGGGACGGCAAGACCGGCACCAGGCCTGCCGCCGAGGCCGCGGCGAGACCGGCCGGCGGGGCTG AGGATGAGCGGCTCTCCACAGCCCTCTCCGAGGTCTGCGCCACCCTCGCATTGCTGCGCGAGGATTTCAACACGCATGTG TCGAGGGTAGACAGCGAGGTGGCGCAACTGGGGCGCTCGGTGGAGGGGCTTGGCGCAGCGCTAGAACAGATACGGGAACA GGCGGTCCAGGAAAGCAACGTAGAGGGAGGTTTCGTGCGCAGGCTCTTCGGTTCCGGCGCGGCGAATGCGAACAAATGA
Upstream 100 bases:
>100_bases CGCTACTCCTATTATCGCTCCGCCGACAACGCCTAGGTTACCGGCGCCGTCTGGCGCCACGGCCGGCAAACTCCGGCCCC CGCAGCACCCCGGAGTACCT
Downstream 100 bases:
>100_bases AAAAGTTTCCGACCAAGAAATCGAATCCCTTTCGGCTCGCCCTATTGACGGCCACCCTCCTTGCGGGTGCCGCCCCTGCC GCTGCCGGCGACCTTACCTT
Product: type II secretion system ATPase ExeA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MYETFFQLQKKPFELIPDPDFIYLSRSHKKALTYLDYGIRERVGFILLTGEVGSGKTTIIRDLLNKRYERVVLAKIFNTR VNSEQLLAMINDDFGLPVAGKDKISLLRELNDFLLEQYALGNHPMLIIDEAQNLAADLLEEIRMLSNLESAHGKLLQIVL VGQPELRETLARPELLQLRQRISINCHLKALSLDEMSEYIEHRMTVAGNKEALSFPPGTLDLVYQFSRGIPRLVNIICDF LMLSAFAEESTVASVEMARDVLGDLEFEQHFWGDGKTGTRPAAEAAARPAGGAEDERLSTALSEVCATLALLREDFNTHV SRVDSEVAQLGRSVEGLGAALEQIREQAVQESNVEGGFVRRLFGSGAANANK
Sequences:
>Translated_372_residues MYETFFQLQKKPFELIPDPDFIYLSRSHKKALTYLDYGIRERVGFILLTGEVGSGKTTIIRDLLNKRYERVVLAKIFNTR VNSEQLLAMINDDFGLPVAGKDKISLLRELNDFLLEQYALGNHPMLIIDEAQNLAADLLEEIRMLSNLESAHGKLLQIVL VGQPELRETLARPELLQLRQRISINCHLKALSLDEMSEYIEHRMTVAGNKEALSFPPGTLDLVYQFSRGIPRLVNIICDF LMLSAFAEESTVASVEMARDVLGDLEFEQHFWGDGKTGTRPAAEAAARPAGGAEDERLSTALSEVCATLALLREDFNTHV SRVDSEVAQLGRSVEGLGAALEQIREQAVQESNVEGGFVRRLFGSGAANANK >Mature_372_residues MYETFFQLQKKPFELIPDPDFIYLSRSHKKALTYLDYGIRERVGFILLTGEVGSGKTTIIRDLLNKRYERVVLAKIFNTR VNSEQLLAMINDDFGLPVAGKDKISLLRELNDFLLEQYALGNHPMLIIDEAQNLAADLLEEIRMLSNLESAHGKLLQIVL VGQPELRETLARPELLQLRQRISINCHLKALSLDEMSEYIEHRMTVAGNKEALSFPPGTLDLVYQFSRGIPRLVNIICDF LMLSAFAEESTVASVEMARDVLGDLEFEQHFWGDGKTGTRPAAEAAARPAGGAEDERLSTALSEVCATLALLREDFNTHV SRVDSEVAQLGRSVEGLGAALEQIREQAVQESNVEGGFVRRLFGSGAANANK
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 41465; Mature: 41465
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYETFFQLQKKPFELIPDPDFIYLSRSHKKALTYLDYGIRERVGFILLTGEVGSGKTTII CCCHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHH RDLLNKRYERVVLAKIFNTRVNSEQLLAMINDDFGLPVAGKDKISLLRELNDFLLEQYAL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC GNHPMLIIDEAQNLAADLLEEIRMLSNLESAHGKLLQIVLVGQPELRETLARPELLQLRQ CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCHHHHHHH RISINCHLKALSLDEMSEYIEHRMTVAGNKEALSFPPGTLDLVYQFSRGIPRLVNIICDF HCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH LMLSAFAEESTVASVEMARDVLGDLEFEQHFWGDGKTGTRPAAEAAARPAGGAEDERLST HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHH ALSEVCATLALLREDFNTHVSRVDSEVAQLGRSVEGLGAALEQIREQAVQESNVEGGFVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH RLFGSGAANANK HHHCCCCCCCCC >Mature Secondary Structure MYETFFQLQKKPFELIPDPDFIYLSRSHKKALTYLDYGIRERVGFILLTGEVGSGKTTII CCCHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHH RDLLNKRYERVVLAKIFNTRVNSEQLLAMINDDFGLPVAGKDKISLLRELNDFLLEQYAL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC GNHPMLIIDEAQNLAADLLEEIRMLSNLESAHGKLLQIVLVGQPELRETLARPELLQLRQ CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCHHHHHHH RISINCHLKALSLDEMSEYIEHRMTVAGNKEALSFPPGTLDLVYQFSRGIPRLVNIICDF HCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH LMLSAFAEESTVASVEMARDVLGDLEFEQHFWGDGKTGTRPAAEAAARPAGGAEDERLST HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHH ALSEVCATLALLREDFNTHVSRVDSEVAQLGRSVEGLGAALEQIREQAVQESNVEGGFVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH RLFGSGAANANK HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]