| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yveL [H]
Identifier: 197118156
GI number: 197118156
Start: 2042471
End: 2043355
Strand: Direct
Name: yveL [H]
Synonym: Gbem_1771
Alternate gene names: 197118156
Gene position: 2042471-2043355 (Clockwise)
Preceding gene: 197118155
Following gene: 197118157
Centisome position: 44.26
GC content: 65.65
Gene sequence:
>885_bases ATGAGCAGAATAGAGGAAGCGATGGAAAAGGCGGCGCGCATGAGGAATGGGATGGAGCCTCCCCCTCCCGAGTCTGTGCG CGAGCCTGCGGGAGCCTCGGCGCTCCCGCCTCAGACGCCGCAGCCTGTTGGAAGCCCGGCGCTCCCGCCCCAGCCGCCGC AGATTCCGGCAGTCTCCCCGCAGTACGGAAGGCTTGCGCCGCAAAACCCCTTCCTGGTCAACCTGCACGACCCGCACTCC CCTGCGGCCGAGGAGTACCGCAAGCTGAAGTCGGCGCTAGTGAAGATGACCACCGGCGACGTGTTTCGCAACTGCCTCAT GGTGACCAGCTCGATTCCCAGCGAGGGGAAGAGCCTGACCGCGCTGAACCTGGCCTTAAGCCTTGCCCAGGAACTGGACC ACACCGTGCTTCTAGTCGACGCCGACCTGCGCCGCCCGTCCGTGCACCGTTATCTCAACGTGGAGCAGGGGGTGGGGCTT TCCGAGCTTCTAACCGGCGAGGCGCAGGTGGGTGAGACCATCATCCCGACCGGCATAGGCAAGCTCTCCATCATCAGGGC CGGGCGCGCCATCGAGAACCCCGCCGAGCTGTTCACCTCCCAGCGCGGCAAGGCGCTCCTGACCGAGTTGAAGCTACGCT ACCCGGACCGCTACATCATCCTGGACACCCCGCCGGTGCTCCCTTTCGCCGAGGCGCGTTCCCTGGCGCATCTGGTGGAC GGGGTGCTCTTCGTGGTCATGGAGCGGCTCGTGTCCCAGGCCAACCTGAAAGACGCGCTGGAGTCGCTCAAGGCCTGCCC CATCCTCGGGATGGTGTATAACGCCGCTGCGGTCGACGACAAGGACGGGCGCTACTCCTATTATCGCTCCGCCGACAACG CCTAG
Upstream 100 bases:
>100_bases CTACCCTATATGGACAAGGTGCTGGACTTACTGTCCGGGCCGGAAGCCCGGTTACGGATCAAGGGGCTTTTGCAGTGACC GCCGCAGAAACGAGGTTGAT
Downstream 100 bases:
>100_bases GTTACCGGCGCCGTCTGGCGCCACGGCCGGCAAACTCCGGCCCCCGCAGCACCCCGGAGTACCTATGTACGAAACATTTT TCCAGCTGCAAAAAAAGCCG
Product: protein tyrosine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSRIEEAMEKAARMRNGMEPPPPESVREPAGASALPPQTPQPVGSPALPPQPPQIPAVSPQYGRLAPQNPFLVNLHDPHS PAAEEYRKLKSALVKMTTGDVFRNCLMVTSSIPSEGKSLTALNLALSLAQELDHTVLLVDADLRRPSVHRYLNVEQGVGL SELLTGEAQVGETIIPTGIGKLSIIRAGRAIENPAELFTSQRGKALLTELKLRYPDRYIILDTPPVLPFAEARSLAHLVD GVLFVVMERLVSQANLKDALESLKACPILGMVYNAAAVDDKDGRYSYYRSADNA
Sequences:
>Translated_294_residues MSRIEEAMEKAARMRNGMEPPPPESVREPAGASALPPQTPQPVGSPALPPQPPQIPAVSPQYGRLAPQNPFLVNLHDPHS PAAEEYRKLKSALVKMTTGDVFRNCLMVTSSIPSEGKSLTALNLALSLAQELDHTVLLVDADLRRPSVHRYLNVEQGVGL SELLTGEAQVGETIIPTGIGKLSIIRAGRAIENPAELFTSQRGKALLTELKLRYPDRYIILDTPPVLPFAEARSLAHLVD GVLFVVMERLVSQANLKDALESLKACPILGMVYNAAAVDDKDGRYSYYRSADNA >Mature_293_residues SRIEEAMEKAARMRNGMEPPPPESVREPAGASALPPQTPQPVGSPALPPQPPQIPAVSPQYGRLAPQNPFLVNLHDPHSP AAEEYRKLKSALVKMTTGDVFRNCLMVTSSIPSEGKSLTALNLALSLAQELDHTVLLVDADLRRPSVHRYLNVEQGVGLS ELLTGEAQVGETIIPTGIGKLSIIRAGRAIENPAELFTSQRGKALLTELKLRYPDRYIILDTPPVLPFAEARSLAHLVDG VLFVVMERLVSQANLKDALESLKACPILGMVYNAAAVDDKDGRYSYYRSADNA
Specific function: Unknown
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CpsD/CapB family [H]
Homologues:
Organism=Escherichia coli, GI1787216, Length=176, Percent_Identity=34.0909090909091, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI87082032, Length=228, Percent_Identity=29.3859649122807, Blast_Score=86, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: =2.7.10.2 [H]
Molecular weight: Translated: 31900; Mature: 31769
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIEEAMEKAARMRNGMEPPPPESVREPAGASALPPQTPQPVGSPALPPQPPQIPAVSP CCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QYGRLAPQNPFLVNLHDPHSPAAEEYRKLKSALVKMTTGDVFRNCLMVTSSIPSEGKSLT CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH ALNLALSLAQELDHTVLLVDADLRRPSVHRYLNVEQGVGLSELLTGEAQVGETIIPTGIG HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCHHHCCCHHHHHCCCHHHCCEECCCCCC KLSIIRAGRAIENPAELFTSQRGKALLTELKLRYPDRYIILDTPPVLPFAEARSLAHLVD HHHEEECCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH GVLFVVMERLVSQANLKDALESLKACPILGMVYNAAAVDDKDGRYSYYRSADNA HHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRIEEAMEKAARMRNGMEPPPPESVREPAGASALPPQTPQPVGSPALPPQPPQIPAVSP CHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QYGRLAPQNPFLVNLHDPHSPAAEEYRKLKSALVKMTTGDVFRNCLMVTSSIPSEGKSLT CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH ALNLALSLAQELDHTVLLVDADLRRPSVHRYLNVEQGVGLSELLTGEAQVGETIIPTGIG HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCHHHCCCHHHHHCCCHHHCCEECCCCCC KLSIIRAGRAIENPAELFTSQRGKALLTELKLRYPDRYIILDTPPVLPFAEARSLAHLVD HHHEEECCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH GVLFVVMERLVSQANLKDALESLKACPILGMVYNAAAVDDKDGRYSYYRSADNA HHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]