| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118146
Identifier: 197118146
GI number: 197118146
Start: 2029402
End: 2031453
Strand: Direct
Name: 197118146
Synonym: Gbem_1761
Alternate gene names: NA
Gene position: 2029402-2031453 (Clockwise)
Preceding gene: 308535262
Following gene: 197118147
Centisome position: 43.97
GC content: 54.58
Gene sequence:
>2052_bases GTGAAATTCCTGTTAATATGCAGTACGGTGCTTCTTTTGGCCGTCGCGGGGGGAGGGGGTGCCGGTGGTGCCGAACTAGG TCCACGGGTGGAGGCGCAGGAGGTTTCTATTTCGTTGGAGCCTGAACGTCACCTGGTGGTGGGGCAGAGCAGCATCGTAT TTGAGCATGGTGCGGAGAGGGTCTTGATACGGCTGGCTGAGACTGCGCAGGTCGAGTCCGCTCGGGCTGCGGGCAAAGAG ATTCCTTTTTCCTTCGCTAGGGGGACACTGGTCCTTGAACTGCCTCAAGGCGAAAACGTTACCATAACCGTCTCGTATCG GGCCGAATTCAACGACCCTGTCTCCCGGAATCCGGCGGCAGGTGAGGATCCAAGTTACGGCGTCAGCGCTGCGATCACAG CTGAGGGGACTTTTCTTGGTGGCGGCTCCCACTGGTACCCAGTCCCGTCACAGGTGCCTTTGTGTCGCAAAATCAGCATA ACCGCCCCGGCGGGGATCGAGGGCATCACTAACGGGGCCAGGATACTCAGAGAAACATCTGCGGGAGTGACGAAGTCTGT GTGGCAGGAGTCGCGGCCGGTTGGGGTGCCATCGGTGAGTGCCGGGCCGTACCTGATTGAGGAGAGGCAGGCGGCGGGTG TCACGCTTTACAGTTATCTTTACCGGGACAATGCCAATTTGGCGCCTCGGTACTTGGACGCGGCTGCCAAGTACCTGTCT TTTTACCAGGGGCTCTTCGGTCCTTACCCCTTTGAAAAATTCGCAATTGTAGAAAACTTCTTTCCGACCGGTTATGGTTT CCCATCTTTTACGCTTCTTGGCGGAACAGTAATTAGGCTTCCCTTCATCGCCGACACCAGTCTTCCCCATGAGATCGTCC ATTCTTGGTGGGGTAATGGGATAGACGTCGATCTGAGCCAGGGGAACTGGTGCGAAGGGCTCGTTACCTATCTAGCCGAT TACCTGCTTATGGAACGCCGCTCACCAGCCGAGGCGCTGGAATACCGCAAACAGCTCCTGATAGACTATGCCTCGCTGGT AACTGCTGAAAACGACTTTCCACTCACCAGTTTTGTCAGCCGTAGTGATCCTGCCTCGCGTGCCATAGGGTACGGAAAGG GTGCAATGCTTTTTCACATGATCCGTTCCCAGATAGGGGATGACGCGTTCTTCAATGCCCTGCGGGCAATAGCTCGTGAT CGCGTGTATGGTTCGGCTTCATGGAACGATCTTGCTGCGGCATTCTCGCGTAGCGCTGGCCGTGACCTCTCTCCTTGGCT GGGAGAGTGGTTGTCTCGTCCTGGCGGCCCGCGTTTTTCCTTGTCGCAGGTGGAGAAGAAACGCCAGGGGGATGGATGGT TGGTGACCGGTACGGTCTATCAGTCCTCCCCTCCATTCGATGTACGGTTGCCACTAACTCTAGAGACCGAGAGTGGAGTG ATTGAGAGCGTGGTACCGGTGCGCGATCAAAATAGTGTTCGCTTCGCCATATCCACGCCTGTACCGCCGCAACGGCTCCT GCTTGATCCTGAAGCTTCCATCTTCCGAATTATTTCTCCTTCAGAAATCCCGGCTACTGTAAACAGCATCAAAGGGTCTA CCTCACTTGTCGGTGTCATTACTAAGAATTGCAAGGCACCGCCAGAGTTATTTAAAGCCATGCTTGATTCCCTTTCCCAA GCTGACGCGCGTGTGCTGATCGAGTCAGCCTTGGATCCGGCCCAAGCTCAATCCGACGATCTGGTTTTTTGCGGGATGCC GCAAAACCTTTCTCTGCTGCAAATTCCGCAGCAGTTAAATACAGCCTATAAGTCAACCATTGCAGCCGCAGGCGACGATA GCCTACTTTTCGTGGTCCTCAAACATAATCCCCCTGGGAGAGGGGTTATCGCGTTGTTTCAACCGGAATCTAGGGCCGCA GCTGAAAAGTACGCTGCAAAAATAACGCATTATGGCAAATACGGTGTTCTGATCTTTTCTGCTGGTTCAATCAGAATCAA GGGAACCGGCATAGCAGCCGGAGAAGGGCGCTTGATAGATTTCTTAAATTGA
Upstream 100 bases:
>100_bases TGCAGATTACAACAATAGCTGTTAGAGAAAAATTAGAAATGACGGCGGTACGCAGGAAGCTTTTTACTGCCTGGAAGCTG CGTGAGTGCGGAGGGACGTT
Downstream 100 bases:
>100_bases AGCTCTCCAGGCTTTTGATCGCTGTTCTTTCTGTAGATCCAATCGCCTCCTTCTCGCGGAGGGGGCTGTTCTTTCATCCC TACCACATTCCCTTGGTTGA
Product: peptidase M1 superfamily peptidase
Products: NA
Alternate protein names: Metallopeptidase; Aminopeptidase; Aminopeptidase N; Peptidase M; Peptidase Family M1 Protein; Epsilon-Poly-L-Lysine-Degrading; Aminopeptidase N-Like Protein; Peptidase M1 Family Protein; M1 Family Peptidase; Peptidase M1 Membrane Alanine Aminopeptidase-Like Protein; Peptidase; Glutamyl Aminopeptidase; Metalloprotease; HEAT Repeat-Containing PBS Lyase; Aminopeptidase M1 Family Protein; Peptidase M1 Superfamily Peptidase; M1 Family Metalloprotease; PDZ Domain-Containing Protein
Number of amino acids: Translated: 683; Mature: 683
Protein sequence:
>683_residues MKFLLICSTVLLLAVAGGGGAGGAELGPRVEAQEVSISLEPERHLVVGQSSIVFEHGAERVLIRLAETAQVESARAAGKE IPFSFARGTLVLELPQGENVTITVSYRAEFNDPVSRNPAAGEDPSYGVSAAITAEGTFLGGGSHWYPVPSQVPLCRKISI TAPAGIEGITNGARILRETSAGVTKSVWQESRPVGVPSVSAGPYLIEERQAAGVTLYSYLYRDNANLAPRYLDAAAKYLS FYQGLFGPYPFEKFAIVENFFPTGYGFPSFTLLGGTVIRLPFIADTSLPHEIVHSWWGNGIDVDLSQGNWCEGLVTYLAD YLLMERRSPAEALEYRKQLLIDYASLVTAENDFPLTSFVSRSDPASRAIGYGKGAMLFHMIRSQIGDDAFFNALRAIARD RVYGSASWNDLAAAFSRSAGRDLSPWLGEWLSRPGGPRFSLSQVEKKRQGDGWLVTGTVYQSSPPFDVRLPLTLETESGV IESVVPVRDQNSVRFAISTPVPPQRLLLDPEASIFRIISPSEIPATVNSIKGSTSLVGVITKNCKAPPELFKAMLDSLSQ ADARVLIESALDPAQAQSDDLVFCGMPQNLSLLQIPQQLNTAYKSTIAAAGDDSLLFVVLKHNPPGRGVIALFQPESRAA AEKYAAKITHYGKYGVLIFSAGSIRIKGTGIAAGEGRLIDFLN
Sequences:
>Translated_683_residues MKFLLICSTVLLLAVAGGGGAGGAELGPRVEAQEVSISLEPERHLVVGQSSIVFEHGAERVLIRLAETAQVESARAAGKE IPFSFARGTLVLELPQGENVTITVSYRAEFNDPVSRNPAAGEDPSYGVSAAITAEGTFLGGGSHWYPVPSQVPLCRKISI TAPAGIEGITNGARILRETSAGVTKSVWQESRPVGVPSVSAGPYLIEERQAAGVTLYSYLYRDNANLAPRYLDAAAKYLS FYQGLFGPYPFEKFAIVENFFPTGYGFPSFTLLGGTVIRLPFIADTSLPHEIVHSWWGNGIDVDLSQGNWCEGLVTYLAD YLLMERRSPAEALEYRKQLLIDYASLVTAENDFPLTSFVSRSDPASRAIGYGKGAMLFHMIRSQIGDDAFFNALRAIARD RVYGSASWNDLAAAFSRSAGRDLSPWLGEWLSRPGGPRFSLSQVEKKRQGDGWLVTGTVYQSSPPFDVRLPLTLETESGV IESVVPVRDQNSVRFAISTPVPPQRLLLDPEASIFRIISPSEIPATVNSIKGSTSLVGVITKNCKAPPELFKAMLDSLSQ ADARVLIESALDPAQAQSDDLVFCGMPQNLSLLQIPQQLNTAYKSTIAAAGDDSLLFVVLKHNPPGRGVIALFQPESRAA AEKYAAKITHYGKYGVLIFSAGSIRIKGTGIAAGEGRLIDFLN >Mature_683_residues MKFLLICSTVLLLAVAGGGGAGGAELGPRVEAQEVSISLEPERHLVVGQSSIVFEHGAERVLIRLAETAQVESARAAGKE IPFSFARGTLVLELPQGENVTITVSYRAEFNDPVSRNPAAGEDPSYGVSAAITAEGTFLGGGSHWYPVPSQVPLCRKISI TAPAGIEGITNGARILRETSAGVTKSVWQESRPVGVPSVSAGPYLIEERQAAGVTLYSYLYRDNANLAPRYLDAAAKYLS FYQGLFGPYPFEKFAIVENFFPTGYGFPSFTLLGGTVIRLPFIADTSLPHEIVHSWWGNGIDVDLSQGNWCEGLVTYLAD YLLMERRSPAEALEYRKQLLIDYASLVTAENDFPLTSFVSRSDPASRAIGYGKGAMLFHMIRSQIGDDAFFNALRAIARD RVYGSASWNDLAAAFSRSAGRDLSPWLGEWLSRPGGPRFSLSQVEKKRQGDGWLVTGTVYQSSPPFDVRLPLTLETESGV IESVVPVRDQNSVRFAISTPVPPQRLLLDPEASIFRIISPSEIPATVNSIKGSTSLVGVITKNCKAPPELFKAMLDSLSQ ADARVLIESALDPAQAQSDDLVFCGMPQNLSLLQIPQQLNTAYKSTIAAAGDDSLLFVVLKHNPPGRGVIALFQPESRAA AEKYAAKITHYGKYGVLIFSAGSIRIKGTGIAAGEGRLIDFLN
Specific function: Unknown
COG id: COG0308
COG function: function code E; Aminopeptidase N
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI9755335, Length=274, Percent_Identity=26.6423357664234, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6321837, Length=273, Percent_Identity=24.1758241758242, Blast_Score=73, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73657; Mature: 73657
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLLICSTVLLLAVAGGGGAGGAELGPRVEAQEVSISLEPERHLVVGQSSIVFEHGAER CCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCEEEECCCCCE VLIRLAETAQVESARAAGKEIPFSFARGTLVLELPQGENVTITVSYRAEFNDPVSRNPAA EEHHHHHHHHHHHHHHCCCCCCCEECCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCC GEDPSYGVSAAITAEGTFLGGGSHWYPVPSQVPLCRKISITAPAGIEGITNGARILRETS CCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHC AGVTKSVWQESRPVGVPSVSAGPYLIEERQAAGVTLYSYLYRDNANLAPRYLDAAAKYLS CCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEEHHEECCCCCCCHHHHHHHHHHHH FYQGLFGPYPFEKFAIVENFFPTGYGFPSFTLLGGTVIRLPFIADTSLPHEIVHSWWGNG HHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHCCEEEEEEEEECCCCCHHHHHHHCCCC IDVDLSQGNWCEGLVTYLADYLLMERRSPAEALEYRKQLLIDYASLVTAENDFPLTSFVS EEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH RSDPASRAIGYGKGAMLFHMIRSQIGDDAFFNALRAIARDRVYGSASWNDLAAAFSRSAG CCCCHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC RDLSPWLGEWLSRPGGPRFSLSQVEKKRQGDGWLVTGTVYQSSPPFDVRLPLTLETESGV CCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEEECCCCC IESVVPVRDQNSVRFAISTPVPPQRLLLDPEASIFRIISPSEIPATVNSIKGSTSLVGVI HHHCCCCCCCCCEEEEEECCCCHHHEEECCCCCEEEEECCCCCCCHHHHCCCCCEEEEEE TKNCKAPPELFKAMLDSLSQADARVLIESALDPAQAQSDDLVFCGMPQNLSLLQIPQQLN ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHCCHHHH TAYKSTIAAAGDDSLLFVVLKHNPPGRGVIALFQPESRAAAEKYAAKITHYGKYGVLIFS HHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEE AGSIRIKGTGIAAGEGRLIDFLN CCEEEEEECEEECCCCCEEECCC >Mature Secondary Structure MKFLLICSTVLLLAVAGGGGAGGAELGPRVEAQEVSISLEPERHLVVGQSSIVFEHGAER CCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCEEEECCCCCE VLIRLAETAQVESARAAGKEIPFSFARGTLVLELPQGENVTITVSYRAEFNDPVSRNPAA EEHHHHHHHHHHHHHHCCCCCCCEECCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCC GEDPSYGVSAAITAEGTFLGGGSHWYPVPSQVPLCRKISITAPAGIEGITNGARILRETS CCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHC AGVTKSVWQESRPVGVPSVSAGPYLIEERQAAGVTLYSYLYRDNANLAPRYLDAAAKYLS CCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEEHHEECCCCCCCHHHHHHHHHHHH FYQGLFGPYPFEKFAIVENFFPTGYGFPSFTLLGGTVIRLPFIADTSLPHEIVHSWWGNG HHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHCCEEEEEEEEECCCCCHHHHHHHCCCC IDVDLSQGNWCEGLVTYLADYLLMERRSPAEALEYRKQLLIDYASLVTAENDFPLTSFVS EEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH RSDPASRAIGYGKGAMLFHMIRSQIGDDAFFNALRAIARDRVYGSASWNDLAAAFSRSAG CCCCHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC RDLSPWLGEWLSRPGGPRFSLSQVEKKRQGDGWLVTGTVYQSSPPFDVRLPLTLETESGV CCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEEECCCCC IESVVPVRDQNSVRFAISTPVPPQRLLLDPEASIFRIISPSEIPATVNSIKGSTSLVGVI HHHCCCCCCCCCEEEEEECCCCHHHEEECCCCCEEEEECCCCCCCHHHHCCCCCEEEEEE TKNCKAPPELFKAMLDSLSQADARVLIESALDPAQAQSDDLVFCGMPQNLSLLQIPQQLN ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHCCHHHH TAYKSTIAAAGDDSLLFVVLKHNPPGRGVIALFQPESRAAAEKYAAKITHYGKYGVLIFS HHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEE AGSIRIKGTGIAAGEGRLIDFLN CCEEEEEECEEECCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA