Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 308535262

Identifier: 308535262

GI number: 308535262

Start: 2027031

End: 2028281

Strand: Direct

Name: 308535262

Synonym: NA

Alternate gene names: NA

Gene position: 2027031-2028281 (Clockwise)

Preceding gene: 197118140

Following gene: 197118146

Centisome position: 43.92

GC content: 58.91

Gene sequence:

>1251_bases
GTGAGGGGGGGCACGGCGCTGTTATTTTCCCTCGCCCTGTTTGCTGGTTTGGCGTCTTACGCCCGTGCGGCGGATACCTC
CTCGATTTACCACACTCCGCTGGCAGGAGAGCCAGGCCAAATCGATTTCATGGGTGAAAAGGTCACTATCCCCCCCCTCG
ATCGCAGCGACATGACCTCCATTACGCTCGGTGCGTCGTTGCTCACCCCGCAACAGGGGGGGACCACTGCGCTCCCTGTG
GCTGTTTTCTACCACCGGCGTATCAAGGACGAATATCGTGCCCGTTACACCGTCAGCCTCTTCGTGAATGAACTGGAGTA
CGACCGGAACCTGGGGAGTGTTGAACTGGTTACCCACTTTGAGAACTACACCCTGCCGGTGCAACAAAGCGAGGTCCTTG
GAGGCCAGGAGATGAAGGGCACCTCCCTTTACTGGGGCACCCTTCTCGGGTCGGTGGGGGCGGGATGGCGTATCCCAGTG
TACCCTCGGGAGGTGGATAACGACCTTCGGTTGCAGCTATTGGGACGGGTCGGGTACTTCTATGCCGACACCGGTAAGGA
TACCGCTGCTAATCTCTCGGTACCCAACGACACCATGCTCTATGGCGCCAGGGCTCGCGTGCACTATGACACCATGCGCC
GCAACCTGCTGGAACTGCCGCACCAAGGGTTTGCCGCAGGGGGGGATCTGGATTTGATGCATCGATACAAGTGGAGCGAG
CAGTCGGCTACCGCGGCGCGGGGTGGAAACCGTGATTACCTGCAGCTTTCAGGCTATCTTGCCGGGGCTGCGGGGATACC
GGGAAGGTCGGAGCGCGACCGCCTAATTTATTGTGCCTATGCCGGTCACACCTTCAACAATAACGGAGACAGGTTCAACG
CCTTCCGTCTCAACGGAGCCTCTTTCCCGAGCGAGGCCGACGACGTGGTCCGTCCTCACTACACCGGCATCATTTACGAT
AACATCCCGGTAACCTCATATGCCACCGTCTCAGCGGGTTATCGCCGCGAGCTTACCTTCTTTCTTTACCTTAGCCTGTA
CGGATCCTACATCTGGGCCGACCGGGCAACCGTTGAAGGCGCGAATCGGGTCACCTTCCGCGGCAAAGACGGAGGCGCGG
GGACTATCACCCTCGATAGCGCCTTTTTGTGGGACTCGTCCTTTTATCTGGCCTATACATGGGAATCGGGTGTGATCCGA
AACGGCCGGTCAGGAGGGGGGTACACCGTGATGTGGAACAAGCTCTTCTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: porin

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:
NA

Sequences:

>Translated_416_residues
MRGGTALLFSLALFAGLASYARAADTSSIYHTPLAGEPGQIDFMGEKVTIPPLDRSDMTSITLGASLLTPQQGGTTALPV
AVFYHRRIKDEYRARYTVSLFVNELEYDRNLGSVELVTHFENYTLPVQQSEVLGGQEMKGTSLYWGTLLGSVGAGWRIPV
YPREVDNDLRLQLLGRVGYFYADTGKDTAANLSVPNDTMLYGARARVHYDTMRRNLLELPHQGFAAGGDLDLMHRYKWSE
QSATAARGGNRDYLQLSGYLAGAAGIPGRSERDRLIYCAYAGHTFNNNGDRFNAFRLNGASFPSEADDVVRPHYTGIIYD
NIPVTSYATVSAGYRRELTFFLYLSLYGSYIWADRATVEGANRVTFRGKDGGAGTITLDSAFLWDSSFYLAYTWESGVIR
NGRSGGGYTVMWNKLF
>Mature_416_residues
MRGGTALLFSLALFAGLASYARAADTSSIYHTPLAGEPGQIDFMGEKVTIPPLDRSDMTSITLGASLLTPQQGGTTALPV
AVFYHRRIKDEYRARYTVSLFVNELEYDRNLGSVELVTHFENYTLPVQQSEVLGGQEMKGTSLYWGTLLGSVGAGWRIPV
YPREVDNDLRLQLLGRVGYFYADTGKDTAANLSVPNDTMLYGARARVHYDTMRRNLLELPHQGFAAGGDLDLMHRYKWSE
QSATAARGGNRDYLQLSGYLAGAAGIPGRSERDRLIYCAYAGHTFNNNGDRFNAFRLNGASFPSEADDVVRPHYTGIIYD
NIPVTSYATVSAGYRRELTFFLYLSLYGSYIWADRATVEGANRVTFRGKDGGAGTITLDSAFLWDSSFYLAYTWESGVIR
NGRSGGGYTVMWNKLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46031; Mature: 46031

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGGTALLFSLALFAGLASYARAADTSSIYHTPLAGEPGQIDFMGEKVTIPPLDRSDMTS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCEEECCCCCCCCCCE
ITLGASLLTPQQGGTTALPVAVFYHRRIKDEYRARYTVSLFVNELEYDRNLGSVELVTHF
EEECCEEECCCCCCCEEHHHHHHHHHHHHHHHHCEEEEEEEEEHHHHCCCCCCEEEEEEE
ENYTLPVQQSEVLGGQEMKGTSLYWGTLLGSVGAGWRIPVYPREVDNDLRLQLLGRVGYF
CCCCCCCCHHHHCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEHHCCEE
YADTGKDTAANLSVPNDTMLYGARARVHYDTMRRNLLELPHQGFAAGGDLDLMHRYKWSE
EEECCCCCEEEECCCCCEEEEECEEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCC
QSATAARGGNRDYLQLSGYLAGAAGIPGRSERDRLIYCAYAGHTFNNNGDRFNAFRLNGA
CCCHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCC
SFPSEADDVVRPHYTGIIYDNIPVTSYATVSAGYRRELTFFLYLSLYGSYIWADRATVEG
CCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCHHHHEEEEEEHHCCEEEECCEEECC
ANRVTFRGKDGGAGTITLDSAFLWDSSFYLAYTWESGVIRNGRSGGGYTVMWNKLF
CCEEEEECCCCCCEEEEECCEEEECCCEEEEEEECCCCEECCCCCCCEEEEEEECC
>Mature Secondary Structure
MRGGTALLFSLALFAGLASYARAADTSSIYHTPLAGEPGQIDFMGEKVTIPPLDRSDMTS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCEEECCCCCCCCCCE
ITLGASLLTPQQGGTTALPVAVFYHRRIKDEYRARYTVSLFVNELEYDRNLGSVELVTHF
EEECCEEECCCCCCCEEHHHHHHHHHHHHHHHHCEEEEEEEEEHHHHCCCCCCEEEEEEE
ENYTLPVQQSEVLGGQEMKGTSLYWGTLLGSVGAGWRIPVYPREVDNDLRLQLLGRVGYF
CCCCCCCCHHHHCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEHHCCEE
YADTGKDTAANLSVPNDTMLYGARARVHYDTMRRNLLELPHQGFAAGGDLDLMHRYKWSE
EEECCCCCEEEECCCCCEEEEECEEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCC
QSATAARGGNRDYLQLSGYLAGAAGIPGRSERDRLIYCAYAGHTFNNNGDRFNAFRLNGA
CCCHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCC
SFPSEADDVVRPHYTGIIYDNIPVTSYATVSAGYRRELTFFLYLSLYGSYIWADRATVEG
CCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCHHHHEEEEEEHHCCEEEECCEEECC
ANRVTFRGKDGGAGTITLDSAFLWDSSFYLAYTWESGVIRNGRSGGGYTVMWNKLF
CCEEEEECCCCCCEEEEECCEEEECCCEEEEEEECCCCEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA