| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is tauC [C]
Identifier: 197118115
GI number: 197118115
Start: 1994019
End: 1994906
Strand: Direct
Name: tauC [C]
Synonym: Gbem_1730
Alternate gene names: 197118115
Gene position: 1994019-1994906 (Clockwise)
Preceding gene: 197118114
Following gene: 197118116
Centisome position: 43.21
GC content: 66.33
Gene sequence:
>888_bases ATGGAACAGTCAGACACAATAGCTCTCGCGCCCGCAGCTCAGGTCCTGGCGCAGCGTGCCCCCGGCCCAGTCGTGGTCGA GGTCGAAGCGGCGCGACCGCTCTCCCCAGCCGAGAGGCTCTGGAACGTGGCGGCGCTCCGCAAGCTGCTCCTTCTTTCCC TGCTCCTCGCGCTCTGGCAGGTTTACGCCGTCACGCTCGACAAGCCGCTGCTCTTTCCGACCCTGGACGATACGCTCGCC GCGCTTTGGAACGGCATCCTGCACGGGGAGCTCCTGGGGCGGGTGGGGCATTCGCTACGGACGCTGGTGACCGGATACGC CATCGGCGCCACACTCGCCGCGCTTCTCGCGGTGGCGGCCTACAGCACCAGGTTCGGCAACGACCTGATGGAGATACTGA CCGCGACCTTCAACCCGCTCCCCCCCATCGCGCTTCTCCCGGTCTCGCTGATCTGGTTCGGGCTGGGGCAGGCGAGCATT GTCTTCGTGCTGGTGCACGCGGTGCTCTGGCCCATGGCGCTGAACGCCCACACGGGGTTCACCGGCATCACCCCCACCAT CCGGATGGTCGGGCGCAATTACGGGCTCACCGGCTGGCGCTTCGCCTGGCGCATCCTCTTCCCGGCCGCGTTTCCGCAGC TCCTCACCGGGTTGAAGATCGGCTGGGCCTTCGGCTGGCGCTCGCTCATCGCCGCCGAGCTGGTCTACGGGGTAAGCTCC GGCTCCGGCGGGATCGGGTGGTTTATCTACGAAAACAAGAACCAGCTGGAGACCGCCTCGGTCTTCGCGGGGCTATTGAC CATTATCCTGATCGGGCTGGCCGTCGAGAACCTGCTCTTCGCGGGGATCGAGCGACGGACGGTACTACGCTGGGGAATGA AGCACTGA
Upstream 100 bases:
>100_bases GGGGGAGCTTGGGCCGGTGCAAAGCGGGGCCGAGCTGCAGGAGCGGATCCACCGCTCCCTTTTCGAGACTGCCTGCGACT ATTCGATCTAGGGGGAGAAC
Downstream 100 bases:
>100_bases AAGGAGGTGCGCCATGGCTGTGGAACATCTGGTTATCGCAGGCAAGAGCGGAGTGGGGAAGTCGACCACCGCGGCCAATC TGAGCGCCGCCCTGGCGGAG
Product: ABC transporter membrane protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MEQSDTIALAPAAQVLAQRAPGPVVVEVEAARPLSPAERLWNVAALRKLLLLSLLLALWQVYAVTLDKPLLFPTLDDTLA ALWNGILHGELLGRVGHSLRTLVTGYAIGATLAALLAVAAYSTRFGNDLMEILTATFNPLPPIALLPVSLIWFGLGQASI VFVLVHAVLWPMALNAHTGFTGITPTIRMVGRNYGLTGWRFAWRILFPAAFPQLLTGLKIGWAFGWRSLIAAELVYGVSS GSGGIGWFIYENKNQLETASVFAGLLTIILIGLAVENLLFAGIERRTVLRWGMKH
Sequences:
>Translated_295_residues MEQSDTIALAPAAQVLAQRAPGPVVVEVEAARPLSPAERLWNVAALRKLLLLSLLLALWQVYAVTLDKPLLFPTLDDTLA ALWNGILHGELLGRVGHSLRTLVTGYAIGATLAALLAVAAYSTRFGNDLMEILTATFNPLPPIALLPVSLIWFGLGQASI VFVLVHAVLWPMALNAHTGFTGITPTIRMVGRNYGLTGWRFAWRILFPAAFPQLLTGLKIGWAFGWRSLIAAELVYGVSS GSGGIGWFIYENKNQLETASVFAGLLTIILIGLAVENLLFAGIERRTVLRWGMKH >Mature_295_residues MEQSDTIALAPAAQVLAQRAPGPVVVEVEAARPLSPAERLWNVAALRKLLLLSLLLALWQVYAVTLDKPLLFPTLDDTLA ALWNGILHGELLGRVGHSLRTLVTGYAIGATLAALLAVAAYSTRFGNDLMEILTATFNPLPPIALLPVSLIWFGLGQASI VFVLVHAVLWPMALNAHTGFTGITPTIRMVGRNYGLTGWRFAWRILFPAAFPQLLTGLKIGWAFGWRSLIAAELVYGVSS GSGGIGWFIYENKNQLETASVFAGLLTIILIGLAVENLLFAGIERRTVLRWGMKH
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=214, Percent_Identity=25.7009345794392, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI87081802, Length=239, Percent_Identity=25.1046025104602, Blast_Score=78, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31970; Mature: 31970
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQSDTIALAPAAQVLAQRAPGPVVVEVEAARPLSPAERLWNVAALRKLLLLSLLLALWQ CCCCCCEEECHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VYAVTLDKPLLFPTLDDTLAALWNGILHGELLGRVGHSLRTLVTGYAIGATLAALLAVAA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSTRFGNDLMEILTATFNPLPPIALLPVSLIWFGLGQASIVFVLVHAVLWPMALNAHTGF HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC TGITPTIRMVGRNYGLTGWRFAWRILFPAAFPQLLTGLKIGWAFGWRSLIAAELVYGVSS CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GSGGIGWFIYENKNQLETASVFAGLLTIILIGLAVENLLFAGIERRTVLRWGMKH CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC >Mature Secondary Structure MEQSDTIALAPAAQVLAQRAPGPVVVEVEAARPLSPAERLWNVAALRKLLLLSLLLALWQ CCCCCCEEECHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VYAVTLDKPLLFPTLDDTLAALWNGILHGELLGRVGHSLRTLVTGYAIGATLAALLAVAA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSTRFGNDLMEILTATFNPLPPIALLPVSLIWFGLGQASIVFVLVHAVLWPMALNAHTGF HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC TGITPTIRMVGRNYGLTGWRFAWRILFPAAFPQLLTGLKIGWAFGWRSLIAAELVYGVSS CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GSGGIGWFIYENKNQLETASVFAGLLTIILIGLAVENLLFAGIERRTVLRWGMKH CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]