Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is cysP [H]
Identifier: 197118108
GI number: 197118108
Start: 1987443
End: 1988432
Strand: Direct
Name: cysP [H]
Synonym: Gbem_1723
Alternate gene names: 197118108
Gene position: 1987443-1988432 (Clockwise)
Preceding gene: 197118107
Following gene: 197118109
Centisome position: 43.06
GC content: 59.9
Gene sequence:
>990_bases ATGAAACAGCAGATTCGCACCGCATTACTCACACTGTTGGTGGCGGCCTTGCCGCTGACAGCCTTCGCCGCCCAGGAATT CCTCAACGTCTCCTACGACCCGACCCGGGAGCTGTACCAGGACTTCAACAAGGCCTTTGCCAAGAAGTCCGGGCAAAAAG CGACCTTCAAGCAGTCCCACGGCGGCTCCGGGAAGCAGGCGAGGGCAGTCATCGACGGGCTGGAAGCGGACGTCGTCACC CTGGCTTTGGCCTACGACATCGACGAGATCAGCGACAAGGCGAAGCTGATCCCGGCCAACTGGCAGAAAAGACTCCCCAA CAACAGCTCTCCCTACACTTCGACCATCGTCTTCCTGGTGCGCAAGGGAAACCCCAAAAAGATCAAGGACTGGAACGACC TGGTTAAGCCGGGTGTCTCCGTGATCACCCCCAACCCGAAGACCTCCGGCGGTGCGCGCTGGAACTACCTCGCCGCCTGG GGCTACGCGCTGAAAGGTGGCAATGAAACCAAGGCAAAGGCGTTTGTCGCCGAGCTCTTCAAGCATGTACCGGTGCTCGA TTCCGGCGCACGCGGTTCCACCACGACCTTCGTGCAGCGCGGCCAGGGGGATGTGCTCCTCGCCTGGGAAAACGAGGCAT TCCTCGCGGTCAACGAGCTGGGCAAAGACAAATTCGAGATCGTCGTTCCTTCGCTCAGCATCCTCGCCGAGCCGCCAGTG ACCGTGGTCGACAAGGTGGTCGACAGGAAAGGGACCCGCAAACTCGCCGAGGAGTATCTGAAATACCTCTACTCCCCGGA AGGTCAGGAAATCGCCGCGAGACATTACTACCGTCCGCGCGACAAGAAGGTCGCCGCCAAGTACGCCAAGGTCTTCCCAA AAGTGAAGCTGGTGACCATTGACGACACCTTCGGAGGCTGGCGCAAGGCCCAGAAGACGCACTTTGCCGACGGCGGCGTT TTCGATCAGATTTACTCCGGCGGAAAGTAG
Upstream 100 bases:
>100_bases TTGCTCAGCAGGACAGTGGATATCCCGAATGACAAAGGTGCTTTTTTTTATCTCAATAGTCTATCAAGTCGGTGGATTAA ACATTAAAAGGGGGAGCATC
Downstream 100 bases:
>100_bases CCCGGAGACAACCCGGTTGATGCAGGTTCCTGGAGGGGGCATGGCGACGACACCCGAACAAGCTGGAAAGTGGAACAGCG ATCTCGAGCAAAAGATCCGT
Product: sulfate ABC transporter periplasmic sulfate-binding protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Sulfate starvation-induced protein 2; SSI2 [H]
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKQQIRTALLTLLVAALPLTAFAAQEFLNVSYDPTRELYQDFNKAFAKKSGQKATFKQSHGGSGKQARAVIDGLEADVVT LALAYDIDEISDKAKLIPANWQKRLPNNSSPYTSTIVFLVRKGNPKKIKDWNDLVKPGVSVITPNPKTSGGARWNYLAAW GYALKGGNETKAKAFVAELFKHVPVLDSGARGSTTTFVQRGQGDVLLAWENEAFLAVNELGKDKFEIVVPSLSILAEPPV TVVDKVVDRKGTRKLAEEYLKYLYSPEGQEIAARHYYRPRDKKVAAKYAKVFPKVKLVTIDDTFGGWRKAQKTHFADGGV FDQIYSGGK
Sequences:
>Translated_329_residues MKQQIRTALLTLLVAALPLTAFAAQEFLNVSYDPTRELYQDFNKAFAKKSGQKATFKQSHGGSGKQARAVIDGLEADVVT LALAYDIDEISDKAKLIPANWQKRLPNNSSPYTSTIVFLVRKGNPKKIKDWNDLVKPGVSVITPNPKTSGGARWNYLAAW GYALKGGNETKAKAFVAELFKHVPVLDSGARGSTTTFVQRGQGDVLLAWENEAFLAVNELGKDKFEIVVPSLSILAEPPV TVVDKVVDRKGTRKLAEEYLKYLYSPEGQEIAARHYYRPRDKKVAAKYAKVFPKVKLVTIDDTFGGWRKAQKTHFADGGV FDQIYSGGK >Mature_329_residues MKQQIRTALLTLLVAALPLTAFAAQEFLNVSYDPTRELYQDFNKAFAKKSGQKATFKQSHGGSGKQARAVIDGLEADVVT LALAYDIDEISDKAKLIPANWQKRLPNNSSPYTSTIVFLVRKGNPKKIKDWNDLVKPGVSVITPNPKTSGGARWNYLAAW GYALKGGNETKAKAFVAELFKHVPVLDSGARGSTTTFVQRGQGDVLLAWENEAFLAVNELGKDKFEIVVPSLSILAEPPV TVVDKVVDRKGTRKLAEEYLKYLYSPEGQEIAARHYYRPRDKKVAAKYAKVFPKVKLVTIDDTFGGWRKAQKTHFADGGV FDQIYSGGK
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=321, Percent_Identity=70.404984423676, Blast_Score=458, Evalue=1e-130, Organism=Escherichia coli, GI1788765, Length=313, Percent_Identity=49.8402555910543, Blast_Score=306, Evalue=1e-84,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36357; Mature: 36357
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQQIRTALLTLLVAALPLTAFAAQEFLNVSYDPTRELYQDFNKAFAKKSGQKATFKQSH CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCC GGSGKQARAVIDGLEADVVTLALAYDIDEISDKAKLIPANWQKRLPNNSSPYTSTIVFLV CCCCHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCEECCCCHHHHCCCCCCCCEEEEEEEE RKGNPKKIKDWNDLVKPGVSVITPNPKTSGGARWNYLAAWGYALKGGNETKAKAFVAELF ECCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCEEHHEEEHHEECCCCCHHHHHHHHHHH KHVPVLDSGARGSTTTFVQRGQGDVLLAWENEAFLAVNELGKDKFEIVVPSLSILAEPPV HHCCCCCCCCCCCCHHHEECCCCCEEEEECCCEEEEHHHCCCCEEEEEECCHHHHCCCCH TVVDKVVDRKGTRKLAEEYLKYLYSPEGQEIAARHYYRPRDKKVAAKYAKVFPKVKLVTI HHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEE DDTFGGWRKAQKTHFADGGVFDQIYSGGK ECCCCCHHHHHHCCCCCCCHHHHHHCCCC >Mature Secondary Structure MKQQIRTALLTLLVAALPLTAFAAQEFLNVSYDPTRELYQDFNKAFAKKSGQKATFKQSH CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCC GGSGKQARAVIDGLEADVVTLALAYDIDEISDKAKLIPANWQKRLPNNSSPYTSTIVFLV CCCCHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCEECCCCHHHHCCCCCCCCEEEEEEEE RKGNPKKIKDWNDLVKPGVSVITPNPKTSGGARWNYLAAWGYALKGGNETKAKAFVAELF ECCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCEEHHEEEHHEECCCCCHHHHHHHHHHH KHVPVLDSGARGSTTTFVQRGQGDVLLAWENEAFLAVNELGKDKFEIVVPSLSILAEPPV HHCCCCCCCCCCCCHHHEECCCCCEEEEECCCEEEEHHHCCCCEEEEEECCHHHHCCCCH TVVDKVVDRKGTRKLAEEYLKYLYSPEGQEIAARHYYRPRDKKVAAKYAKVFPKVKLVTI HHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEE DDTFGGWRKAQKTHFADGGVFDQIYSGGK ECCCCCHHHHHHCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3158524; 2002055; 8346018; 9278503; 9298646; 8774726 [H]