Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is 197118109
Identifier: 197118109
GI number: 197118109
Start: 1988473
End: 1988628
Strand: Direct
Name: 197118109
Synonym: Gbem_1724
Alternate gene names: NA
Gene position: 1988473-1988628 (Clockwise)
Preceding gene: 197118108
Following gene: 197118110
Centisome position: 43.09
GC content: 52.56
Gene sequence:
>156_bases ATGGCGACGACACCCGAACAAGCTGGAAAGTGGAACAGCGATCTCGAGCAAAAGATCCGTCTGGCTCTCGGAGACATCCG TTTCGGGACGGTGACCCTCGTCATACAGGATGGCAAGGTCATCCAACTGGACAAGAACGAAAAGATCAGGATTTAG
Upstream 100 bases:
>100_bases CAGAAGACGCACTTTGCCGACGGCGGCGTTTTCGATCAGATTTACTCCGGCGGAAAGTAGCCCGGAGACAACCCGGTTGA TGCAGGTTCCTGGAGGGGGC
Downstream 100 bases:
>100_bases CCGAGATCAGGATTTAGCCCAGCACTAAATCAACCAGTCTCCAGCTCTCCCCCTCCCTTGACGGGCCTGCGCGCCGTAGC GCTTCGGTCCGCGAAGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 51; Mature: 50
Protein sequence:
>51_residues MATTPEQAGKWNSDLEQKIRLALGDIRFGTVTLVIQDGKVIQLDKNEKIRI
Sequences:
>Translated_51_residues MATTPEQAGKWNSDLEQKIRLALGDIRFGTVTLVIQDGKVIQLDKNEKIRI >Mature_50_residues ATTPEQAGKWNSDLEQKIRLALGDIRFGTVTLVIQDGKVIQLDKNEKIRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5753; Mature: 5622
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTPEQAGKWNSDLEQKIRLALGDIRFGTVTLVIQDGKVIQLDKNEKIRI CCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCEECC >Mature Secondary Structure ATTPEQAGKWNSDLEQKIRLALGDIRFGTVTLVIQDGKVIQLDKNEKIRI CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA