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The map label for this gene is opsX [H]

Identifier: 197117241

GI number: 197117241

Start: 1004385

End: 1005467

Strand: Direct

Name: opsX [H]

Synonym: Gbem_0849

Alternate gene names: 197117241

Gene position: 1004385-1005467 (Clockwise)

Preceding gene: 308535196

Following gene: 197117242

Centisome position: 21.76

GC content: 63.07

Gene sequence:

>1083_bases
ATGTTTGCCTCACAGAGTGAAAGGCGCGGCGGCAAGAGGATCTTGGTACTGCGCTACCGGTTCATCGGGGACACCATCCT
CACCATACCTTTCCTGAGGAATCTCAGAAAGGCGGAGCCGGATGCCCATATCGCCTGGGTGCTGGCCCCGGGGTCGGCCG
AGGTGGCCGACGGGATACCGTACGTCGACGAATTGATCTTCTGGGATCCCCCGACCATACATGCGGACAGCCGCTCCACC
CACAAGACCATGGGGGACAAGCTCGGTTTTATCCGGCAACTGCGGGCCCGTCGTTTCGACAAGGTCTACGTGCTGAAACG
CTCGTTCGGCAGTGCGGTGATTGGGCTTCTTTCGGGCGCGCGCTCCAGGGTGGGTTTCTCGACCGAGGGGCGCCGCTTCT
TGCTCACCAAGGGGGTGCCGTACCAGCACGGCCAGCATGAGGTGCAAAACTTCCTCGACGTTCTTCGCGCGGACGGGGTG
CCGGTAACCGACGACTACCTGGAAGCCTGGCTCTCTGATGAGGAACAGGCGTTCGCCGACGGCTTCTTCCAGGAGAGAGG
CGTCGACCCGGGCGAGAAGGTTATCGCCATACACCCCTTTGCCGCCAACGAGACCCGCGGATGGCATCTCGACAACTTCA
TCGAACTGGCGCGGCTCCTCCAGGAGCGTTACGGCGCCCGCATACTTTTCCTTGGGGGGCCAAGAGACCGCGAGGCGCTG
GTCCCGATCCGGGCGGCGCTCCCGGTAAAGCCGCTGGAGGCCGTAGGCGCCACTACGCTGCGCCAAACCATGGCCATTTT
GTCGCGCTGCAACCTGCTTGTGTGCAACGACAGCGGCATCATGCACCTGGGGGCGTCGCTTCAGGTGCCGCTGGTGGCGC
TTTTCGGGCCCCAGTCGCCGGTGAAGTTCGGCCCCTGGGGGGCACGTTGCAGGGTGATCTACCGCAAGTTCCCCTGCAGC
CCTTGCCGGCAGAAGTTCTTCGAAGAATGCAAGCCCTCGGCAAGGATGAAGCCGGAGTGCGTAGAGGCGATCACGGTCGA
TGAAGTGATGGGCGAGGTCGCTGTTTTGTGGGAAGGGCGCTAG

Upstream 100 bases:

>100_bases
TGATCTGCCCCGCCTGCCGACCTGCCGGAGCTATCGATGAAGAAGACAACGGGGCACCCGCCGGCAGCGGCGAGGCCTGC
GCGGTGGATAAGGAGCGTTG

Downstream 100 bases:

>100_bases
CGGGCGCTGAAAGCTCGCTCTTGCGGGAAACATCTACGAGGTATTTCAGTGTCATCAGGTAACGCTATGGTCCAGTCCGG
CAAAAGGGTCTCCATCTCTG

Product: lipopolysaccharide heptosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MFASQSERRGGKRILVLRYRFIGDTILTIPFLRNLRKAEPDAHIAWVLAPGSAEVADGIPYVDELIFWDPPTIHADSRST
HKTMGDKLGFIRQLRARRFDKVYVLKRSFGSAVIGLLSGARSRVGFSTEGRRFLLTKGVPYQHGQHEVQNFLDVLRADGV
PVTDDYLEAWLSDEEQAFADGFFQERGVDPGEKVIAIHPFAANETRGWHLDNFIELARLLQERYGARILFLGGPRDREAL
VPIRAALPVKPLEAVGATTLRQTMAILSRCNLLVCNDSGIMHLGASLQVPLVALFGPQSPVKFGPWGARCRVIYRKFPCS
PCRQKFFEECKPSARMKPECVEAITVDEVMGEVAVLWEGR

Sequences:

>Translated_360_residues
MFASQSERRGGKRILVLRYRFIGDTILTIPFLRNLRKAEPDAHIAWVLAPGSAEVADGIPYVDELIFWDPPTIHADSRST
HKTMGDKLGFIRQLRARRFDKVYVLKRSFGSAVIGLLSGARSRVGFSTEGRRFLLTKGVPYQHGQHEVQNFLDVLRADGV
PVTDDYLEAWLSDEEQAFADGFFQERGVDPGEKVIAIHPFAANETRGWHLDNFIELARLLQERYGARILFLGGPRDREAL
VPIRAALPVKPLEAVGATTLRQTMAILSRCNLLVCNDSGIMHLGASLQVPLVALFGPQSPVKFGPWGARCRVIYRKFPCS
PCRQKFFEECKPSARMKPECVEAITVDEVMGEVAVLWEGR
>Mature_360_residues
MFASQSERRGGKRILVLRYRFIGDTILTIPFLRNLRKAEPDAHIAWVLAPGSAEVADGIPYVDELIFWDPPTIHADSRST
HKTMGDKLGFIRQLRARRFDKVYVLKRSFGSAVIGLLSGARSRVGFSTEGRRFLLTKGVPYQHGQHEVQNFLDVLRADGV
PVTDDYLEAWLSDEEQAFADGFFQERGVDPGEKVIAIHPFAANETRGWHLDNFIELARLLQERYGARILFLGGPRDREAL
VPIRAALPVKPLEAVGATTLRQTMAILSRCNLLVCNDSGIMHLGASLQVPLVALFGPQSPVKFGPWGARCRVIYRKFPCS
PCRQKFFEECKPSARMKPECVEAITVDEVMGEVAVLWEGR

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790050, Length=316, Percent_Identity=28.4810126582279, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1790062, Length=294, Percent_Identity=24.8299319727891, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 40375; Mature: 40375

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFASQSERRGGKRILVLRYRFIGDTILTIPFLRNLRKAEPDAHIAWVLAPGSAEVADGIP
CCCCCCCCCCCCEEEEEEEEHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCCC
YVDELIFWDPPTIHADSRSTHKTMGDKLGFIRQLRARRFDKVYVLKRSFGSAVIGLLSGA
HHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCH
RSRVGFSTEGRRFLLTKGVPYQHGQHEVQNFLDVLRADGVPVTDDYLEAWLSDEEQAFAD
HHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHH
GFFQERGVDPGEKVIAIHPFAANETRGWHLDNFIELARLLQERYGARILFLGGPRDREAL
HHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC
VPIRAALPVKPLEAVGATTLRQTMAILSRCNLLVCNDSGIMHLGASLQVPLVALFGPQSP
CCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCEEEEECCCCC
VKFGPWGARCRVIYRKFPCSPCRQKFFEECKPSARMKPECVEAITVDEVMGEVAVLWEGR
CCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure
MFASQSERRGGKRILVLRYRFIGDTILTIPFLRNLRKAEPDAHIAWVLAPGSAEVADGIP
CCCCCCCCCCCCEEEEEEEEHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCCC
YVDELIFWDPPTIHADSRSTHKTMGDKLGFIRQLRARRFDKVYVLKRSFGSAVIGLLSGA
HHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCH
RSRVGFSTEGRRFLLTKGVPYQHGQHEVQNFLDVLRADGVPVTDDYLEAWLSDEEQAFAD
HHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHH
GFFQERGVDPGEKVIAIHPFAANETRGWHLDNFIELARLLQERYGARILFLGGPRDREAL
HHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC
VPIRAALPVKPLEAVGATTLRQTMAILSRCNLLVCNDSGIMHLGASLQVPLVALFGPQSP
CCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCEEEEECCCCC
VKFGPWGARCRVIYRKFPCSPCRQKFFEECKPSARMKPECVEAITVDEVMGEVAVLWEGR
CCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]