Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117242

Identifier: 197117242

GI number: 197117242

Start: 1005534

End: 1006331

Strand: Direct

Name: 197117242

Synonym: Gbem_0850

Alternate gene names: NA

Gene position: 1005534-1006331 (Clockwise)

Preceding gene: 197117241

Following gene: 197117243

Centisome position: 21.79

GC content: 60.9

Gene sequence:

>798_bases
ATGGTCCAGTCCGGCAAAAGGGTCTCCATCTCTGCCTTCGTCATCACCAAAAACGAGGAGGCGAAAATAGGGGCCTGCCT
TGCCTCGCTTTCCTTTCTGGACGAGATAGTGGTCGTCGACGATTTCAGCACGGACAGCACCCCCGATATCTGCCGCTCCC
ATGGCGTAACGTTGCATCAGCACCGCTTCACGGGATTCAAGGACCAGAAGAGCTACGCCATGTCGCTGGTGCGAAACGAC
TGGGTGCTGGAACTCGACGCCGACGAGAGGGTTTCGGACCAGATGCGGGACGCGATACTGGCCCTGAAAGAAGAGGACCT
GGGCCGCTACGGCTGCTTCGAGTTCAAGCGCAAGACGCGCTTTTGGGGCAAGTGGATCAAGCACGCCTCCCTCTACCCGG
ACTACAAGCCGAGGCTTTACTGCCGGGTCAACGGGAGATGGAGCGACGGCAACGTGCACGAGCGGTTCATCACGCAAGGC
GCGACCGGCAAGCTCGCCGGCGAGATACTGCACGAGCAGGACCTGGACCTCTACACCTACTTCCTGCGCACCGCGCGCTA
CTCCGACCTTTCGGCAGCCGATTACTTCGCCCGCGGCAGAAGAACCAGCTGGCATCACGTGACCGTCCGCCCCGTGGCGA
CCTTCCTGACCCGTTACCTGATACGGCTGGGTTTCCTCGAGGGTGTGCATGGGTTCGTCATCTCGGCCATGGGCGCGCTG
GGGACCTTCATGAAGTACATGAAGCTTTACGAAATCCAGCGCAAAAGCCGCGGCGGGCTCGGCGGACAGGCGGGATAA

Upstream 100 bases:

>100_bases
GGGCGAGGTCGCTGTTTTGTGGGAAGGGCGCTAGCGGGCGCTGAAAGCTCGCTCTTGCGGGAAACATCTACGAGGTATTT
CAGTGTCATCAGGTAACGCT

Downstream 100 bases:

>100_bases
CCGAGTAACCTGAAGAAAAAGAGAAGAGTTTATGCGTGTACTGATCATCAAGGCGTCGGCGCTTGGCGACATCATCAGCG
CCCTGCCGGTTCTTGACTAC

Product: family glycosyltransferase

Products: UDP; (1,4-beta-D-glucosyl)n+1

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MVQSGKRVSISAFVITKNEEAKIGACLASLSFLDEIVVVDDFSTDSTPDICRSHGVTLHQHRFTGFKDQKSYAMSLVRND
WVLELDADERVSDQMRDAILALKEEDLGRYGCFEFKRKTRFWGKWIKHASLYPDYKPRLYCRVNGRWSDGNVHERFITQG
ATGKLAGEILHEQDLDLYTYFLRTARYSDLSAADYFARGRRTSWHHVTVRPVATFLTRYLIRLGFLEGVHGFVISAMGAL
GTFMKYMKLYEIQRKSRGGLGGQAG

Sequences:

>Translated_265_residues
MVQSGKRVSISAFVITKNEEAKIGACLASLSFLDEIVVVDDFSTDSTPDICRSHGVTLHQHRFTGFKDQKSYAMSLVRND
WVLELDADERVSDQMRDAILALKEEDLGRYGCFEFKRKTRFWGKWIKHASLYPDYKPRLYCRVNGRWSDGNVHERFITQG
ATGKLAGEILHEQDLDLYTYFLRTARYSDLSAADYFARGRRTSWHHVTVRPVATFLTRYLIRLGFLEGVHGFVISAMGAL
GTFMKYMKLYEIQRKSRGGLGGQAG
>Mature_265_residues
MVQSGKRVSISAFVITKNEEAKIGACLASLSFLDEIVVVDDFSTDSTPDICRSHGVTLHQHRFTGFKDQKSYAMSLVRND
WVLELDADERVSDQMRDAILALKEEDLGRYGCFEFKRKTRFWGKWIKHASLYPDYKPRLYCRVNGRWSDGNVHERFITQG
ATGKLAGEILHEQDLDLYTYFLRTARYSDLSAADYFARGRRTSWHHVTVRPVATFLTRYLIRLGFLEGVHGFVISAMGAL
GTFMKYMKLYEIQRKSRGGLGGQAG

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.12

Molecular weight: Translated: 30303; Mature: 30303

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQSGKRVSISAFVITKNEEAKIGACLASLSFLDEIVVVDDFSTDSTPDICRSHGVTLHQ
CCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHCCCEEEE
HRFTGFKDQKSYAMSLVRNDWVLELDADERVSDQMRDAILALKEEDLGRYGCFEFKRKTR
CCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FWGKWIKHASLYPDYKPRLYCRVNGRWSDGNVHERFITQGATGKLAGEILHEQDLDLYTY
HHHHHHHHCCCCCCCCCEEEEEECCEECCCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHH
FLRTARYSDLSAADYFARGRRTSWHHVTVRPVATFLTRYLIRLGFLEGVHGFVISAMGAL
HHHHHCCCCCHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTFMKYMKLYEIQRKSRGGLGGQAG
HHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVQSGKRVSISAFVITKNEEAKIGACLASLSFLDEIVVVDDFSTDSTPDICRSHGVTLHQ
CCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHCCCEEEE
HRFTGFKDQKSYAMSLVRNDWVLELDADERVSDQMRDAILALKEEDLGRYGCFEFKRKTR
CCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FWGKWIKHASLYPDYKPRLYCRVNGRWSDGNVHERFITQGATGKLAGEILHEQDLDLYTY
HHHHHHHHCCCCCCCCCEEEEEECCEECCCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHH
FLRTARYSDLSAADYFARGRRTSWHHVTVRPVATFLTRYLIRLGFLEGVHGFVISAMGAL
HHHHHCCCCCHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTFMKYMKLYEIQRKSRGGLGGQAG
HHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDP-glucose; (1,4-beta-D-glucosyl)n

Specific reaction: UDP-glucose + (1,4-beta-D-glucosyl)n = UDP + (1,4-beta-D-glucosyl)n+1

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]