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The map label for this gene is 197117227

Identifier: 197117227

GI number: 197117227

Start: 987164

End: 988528

Strand: Direct

Name: 197117227

Synonym: Gbem_0835

Alternate gene names: NA

Gene position: 987164-988528 (Clockwise)

Preceding gene: 197117225

Following gene: 197117228

Centisome position: 21.39

GC content: 62.2

Gene sequence:

>1365_bases
ATGCATACCTGCAGGCGTTTCATGTCCTATATCTGCGCCGGACTTTTGACAGCTGCGGCCGTTTCAGGCTGCGGCGGATC
GAAGAAGAATGAGACCATTCCCACCACGGTAGCCATCTTCAACGCCCACAGCCTTATCTTCAGAAACAACACGGCGATGA
CCATGGGGTACAACGCCTTCGGGCAGCTCGGCGACAACTCCCTGGAAAATCGTGCCGTGGCCACCAAGGTCTTCGGGCTG
GGCCACATGACCGGCGGGGCTGTCGGCGCCGAACATACGCTCGCCTTCAGCAACCACACCAGCGTGGTCATGGCCTGGGG
TTACAACGCTTACGGCCAACTGGGCGATCCGGCCATCTCGACCTCCGTCAACACCGCTTTCAGCTCGACGCCGGTTAAGG
CGCAGTTGGAGCGTCCGGTCACCGACGTCGCCGCGGGGGGCTTCCATTCGCTGGGGGTAGCCAACGGCTCCATCTATGCC
TGGGGCAACAACGACTACGGCCAGGTCGGCAACGGCGCCTTCAGCCCCAAGCAGACCACGCCGGCGAAACTCACCAACTA
CACCGAGGCTTCGCTCAATAGCGCAAAGGCCGTCGCTGCAGGCGGGTACCACTCCGCGGCGCTTTTGAACAACGGGACCG
TCTACGCCTGGGGAGACAACAGCTACGGTCAGCTCGCGTTCAGCCCGAACACCACAGCGAAGAGCAGCATTCCGATGAAG
GTCCCGGTGCCCGTCACGACTGGGCAGGTGGAGGCGATAGCTGCCGGAGGGAAGTTCACCTTGGCGCTCGAGGTGGTGAG
GGATGCCTTCAACAAAATCATCGGCCAGACCCTTTGGGGATGGGGCTTCGATGGCGTGGGGCAGCTCGGCATCGACCCGG
CGTCGGCCACGCTTCCCAAGCGGCAGGCAGGGAAGAACGATACGGCCTATACCCGCACCCCGGTCGCTGTTCGCAGCATT
CCCACCGCCGATGGAACTACCATCGTGATCAAGAAGTTCGTCGCCGGCACCGACCACATCCTGCTGCTTCTGGGCGCCCG
CGACAACGACGGCAGCGACGGATCCTGGACTGTGAAGGCGGTCGGCTACAACTACTTCGGGCAGTTGGGTAACAACATGG
GGCTTTCGCCAACCAACAAGAGCACCGAAATCAGCAGCTTCGAATTTGTGAACACCCTCAACACCAGCGGAACACCCGAC
CTTACCGGGGTCACCGACATTGCGGCATTCGGGCAGCATTCCCTGGCCAAGGTGGGGGGCGTCTGGTACGGCTGGGGGAA
CAACGACATGGGGCAGTTGGGCAACCCCGTTCCCACTTCCTCCGCCGGAAACCCGAAGATTCCGGTGCTGGTGCAGGGGC
AGTAG

Upstream 100 bases:

>100_bases
GGCGCTGTGTCAACTCCGATTACCCAGAGTCGGTCCTTGACATTCTTTTCTTTGTATAGTTAAATCCGCCGGATCGATTA
ACCTAACGAGGGGTCTCTAT

Downstream 100 bases:

>100_bases
GAATAAAAACCAGGGGCGGGAAAGGGGCGGAACTCCTTTTGCGGGAGCGTCCTATTCCCCTGTTTTCCCTTGACTTAGAG
TTGCCAATTAGTTTAGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: BNR Repeat-Containing Protein; Cell Wall Anchor Domain-Containing Protein; S-Layer Domain Protein; Alpha-Tubulin Suppressor; RCC1 Repeat-Containing Protein; RCC1 Domain-Containing Protein; S-Layer Domain-Containing Protein; Bnr Repeat Domain Protein; IPT/TIG Domain Protein; BNR Repeat Domain Protein; Cellulosome Dockerin Type I; RCC1 Repeat Protein; ATS1 Domain Repeat Lipoprotein; Fibronectin Type III Domain-Containing Protein; Regulator Of Chromosome Condensation-Like Protein; Rhs Family Protein; Cell Surface Receptor IPT/TIG Domain-Containing Protein; BLIP-II Repeat-Containing Protein; Serine/Threonine Protein Kinase; RCC1 Domain-Containing Protein Alpha-Tubulin Suppressor; Copper Amine Oxidase Domain Protein; Ig Domain Domain Protein; Hyalin; RCC1 Repeat- And Reductase Domain-Containing Protein; Immunoglobulin I-Set Domain-Containing Protein; Ig Family Protein; ATS1 Domain Repeat Protein; Copper Amine Oxidase Domain-Containing Protein; Lipoprotein; BNR Repeat Domain-Containing Protein

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MHTCRRFMSYICAGLLTAAAVSGCGGSKKNETIPTTVAIFNAHSLIFRNNTAMTMGYNAFGQLGDNSLENRAVATKVFGL
GHMTGGAVGAEHTLAFSNHTSVVMAWGYNAYGQLGDPAISTSVNTAFSSTPVKAQLERPVTDVAAGGFHSLGVANGSIYA
WGNNDYGQVGNGAFSPKQTTPAKLTNYTEASLNSAKAVAAGGYHSAALLNNGTVYAWGDNSYGQLAFSPNTTAKSSIPMK
VPVPVTTGQVEAIAAGGKFTLALEVVRDAFNKIIGQTLWGWGFDGVGQLGIDPASATLPKRQAGKNDTAYTRTPVAVRSI
PTADGTTIVIKKFVAGTDHILLLLGARDNDGSDGSWTVKAVGYNYFGQLGNNMGLSPTNKSTEISSFEFVNTLNTSGTPD
LTGVTDIAAFGQHSLAKVGGVWYGWGNNDMGQLGNPVPTSSAGNPKIPVLVQGQ

Sequences:

>Translated_454_residues
MHTCRRFMSYICAGLLTAAAVSGCGGSKKNETIPTTVAIFNAHSLIFRNNTAMTMGYNAFGQLGDNSLENRAVATKVFGL
GHMTGGAVGAEHTLAFSNHTSVVMAWGYNAYGQLGDPAISTSVNTAFSSTPVKAQLERPVTDVAAGGFHSLGVANGSIYA
WGNNDYGQVGNGAFSPKQTTPAKLTNYTEASLNSAKAVAAGGYHSAALLNNGTVYAWGDNSYGQLAFSPNTTAKSSIPMK
VPVPVTTGQVEAIAAGGKFTLALEVVRDAFNKIIGQTLWGWGFDGVGQLGIDPASATLPKRQAGKNDTAYTRTPVAVRSI
PTADGTTIVIKKFVAGTDHILLLLGARDNDGSDGSWTVKAVGYNYFGQLGNNMGLSPTNKSTEISSFEFVNTLNTSGTPD
LTGVTDIAAFGQHSLAKVGGVWYGWGNNDMGQLGNPVPTSSAGNPKIPVLVQGQ
>Mature_454_residues
MHTCRRFMSYICAGLLTAAAVSGCGGSKKNETIPTTVAIFNAHSLIFRNNTAMTMGYNAFGQLGDNSLENRAVATKVFGL
GHMTGGAVGAEHTLAFSNHTSVVMAWGYNAYGQLGDPAISTSVNTAFSSTPVKAQLERPVTDVAAGGFHSLGVANGSIYA
WGNNDYGQVGNGAFSPKQTTPAKLTNYTEASLNSAKAVAAGGYHSAALLNNGTVYAWGDNSYGQLAFSPNTTAKSSIPMK
VPVPVTTGQVEAIAAGGKFTLALEVVRDAFNKIIGQTLWGWGFDGVGQLGIDPASATLPKRQAGKNDTAYTRTPVAVRSI
PTADGTTIVIKKFVAGTDHILLLLGARDNDGSDGSWTVKAVGYNYFGQLGNNMGLSPTNKSTEISSFEFVNTLNTSGTPD
LTGVTDIAAFGQHSLAKVGGVWYGWGNNDMGQLGNPVPTSSAGNPKIPVLVQGQ

Specific function: Unknown

COG id: COG5184

COG function: function code DZ; Alpha-tubulin suppressor and related RCC1 domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI61563742, Length=255, Percent_Identity=31.3725490196078, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI259089405, Length=255, Percent_Identity=31.3725490196078, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI37620181, Length=260, Percent_Identity=28.8461538461538, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI7657152, Length=263, Percent_Identity=28.5171102661597, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI63025188, Length=260, Percent_Identity=28.8461538461538, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI57242759, Length=264, Percent_Identity=30.3030303030303, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI4557445, Length=210, Percent_Identity=32.3809523809524, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI126131099, Length=340, Percent_Identity=27.6470588235294, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI110825982, Length=180, Percent_Identity=32.7777777777778, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI209969703, Length=272, Percent_Identity=23.8970588235294, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI29789090, Length=272, Percent_Identity=23.8970588235294, Blast_Score=67, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6321341, Length=241, Percent_Identity=26.9709543568465, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24655113, Length=213, Percent_Identity=31.4553990610329, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24655115, Length=213, Percent_Identity=31.4553990610329, Blast_Score=82, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47152; Mature: 47152

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00626 RCC1_2 ; PS50012 RCC1_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTCRRFMSYICAGLLTAAAVSGCGGSKKNETIPTTVAIFNAHSLIFRNNTAMTMGYNAF
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECEEEEEECCCEEEECCHHH
GQLGDNSLENRAVATKVFGLGHMTGGAVGAEHTLAFSNHTSVVMAWGYNAYGQLGDPAIS
HCCCCCCHHCCEEEEHEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCC
TSVNTAFSSTPVKAQLERPVTDVAAGGFHSLGVANGSIYAWGNNDYGQVGNGAFSPKQTT
CCCCCCCCCCCCHHHHHCCHHHHHCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCC
PAKLTNYTEASLNSAKAVAAGGYHSAALLNNGTVYAWGDNSYGQLAFSPNTTAKSSIPMK
CHHHCCCCHHHCCCCCEEECCCCCEEEEEECCEEEEECCCCCCEEEECCCCCCCCCCCEE
VPVPVTTGQVEAIAAGGKFTLALEVVRDAFNKIIGQTLWGWGFDGVGQLGIDPASATLPK
ECCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
RQAGKNDTAYTRTPVAVRSIPTADGTTIVIKKFVAGTDHILLLLGARDNDGSDGSWTVKA
HHCCCCCCCEEECCEEEEECCCCCCCEEEEEEHHCCCCEEEEEEECCCCCCCCCEEEEEE
VGYNYFGQLGNNMGLSPTNKSTEISSFEFVNTLNTSGTPDLTGVTDIAAFGQHSLAKVGG
ECCHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHCC
VWYGWGNNDMGQLGNPVPTSSAGNPKIPVLVQGQ
EEEECCCCCHHHCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MHTCRRFMSYICAGLLTAAAVSGCGGSKKNETIPTTVAIFNAHSLIFRNNTAMTMGYNAF
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECEEEEEECCCEEEECCHHH
GQLGDNSLENRAVATKVFGLGHMTGGAVGAEHTLAFSNHTSVVMAWGYNAYGQLGDPAIS
HCCCCCCHHCCEEEEHEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCC
TSVNTAFSSTPVKAQLERPVTDVAAGGFHSLGVANGSIYAWGNNDYGQVGNGAFSPKQTT
CCCCCCCCCCCCHHHHHCCHHHHHCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCC
PAKLTNYTEASLNSAKAVAAGGYHSAALLNNGTVYAWGDNSYGQLAFSPNTTAKSSIPMK
CHHHCCCCHHHCCCCCEEECCCCCEEEEEECCEEEEECCCCCCEEEECCCCCCCCCCCEE
VPVPVTTGQVEAIAAGGKFTLALEVVRDAFNKIIGQTLWGWGFDGVGQLGIDPASATLPK
ECCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
RQAGKNDTAYTRTPVAVRSIPTADGTTIVIKKFVAGTDHILLLLGARDNDGSDGSWTVKA
HHCCCCCCCEEECCEEEEECCCCCCCEEEEEEHHCCCCEEEEEEECCCCCCCCCEEEEEE
VGYNYFGQLGNNMGLSPTNKSTEISSFEFVNTLNTSGTPDLTGVTDIAAFGQHSLAKVGG
ECCHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHCC
VWYGWGNNDMGQLGNPVPTSSAGNPKIPVLVQGQ
EEEECCCCCHHHCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA