| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117183
Identifier: 197117183
GI number: 197117183
Start: 925210
End: 926334
Strand: Reverse
Name: 197117183
Synonym: Gbem_0789
Alternate gene names: NA
Gene position: 926334-925210 (Counterclockwise)
Preceding gene: 197117184
Following gene: 197117182
Centisome position: 20.07
GC content: 61.07
Gene sequence:
>1125_bases ATGTGGAAAAAATCACTGGTAACGATCATCGCTTTGGCAATGGCACAAGTGGCGCTCATCGGTTGTGGCAACGACCACAA CACCCCACCATCCGCCACCTATCACCAGACCAACCTCGTCTCAAACATCCCGGGGCTTGCTGCGACCACCGATGCAAAAC TGGTCAACTCCTGGGGCATTACCCACTCCCCCACCAGCGGTTGGTGGGTAAGCGACAACGGCAGTGGATTCTCGACCGTG TATAACGGCTCGGGGCAACCCTTCCCCATAGCCACCCCGCTGCAGGTGACCATACCGCTGCCGACCGCTCCCGGTACCGC AACGTCGGCGACCCCGACCGGCGTCGTCTTCAACAACTTCTCGGGTTTCAACGTCACCCCCGGGGTACGCACCACCGCGG CAAGGTTTATCTTCGTCACCGAGGACGGCACCATATCCGCCTGGAACACGGGCGCCGCCGCCACGCTCAAGGTCGACAAC GCGACCTTTGCGGCGGGGACCGGCCCCGTCTACAAGGGAGCTGCTATTGCCACAAACGGCACATCCAACAATCTCTACGT AGCCAACTTCCGCAACAAAACGGTAGACGTCTTTGACTCCAACTTCGCCCCCGTAACTCTCGCCGGAACGCCGTTCACCG TACCTGCCCCGCATGTGGCCCCTCCCGCGGGGTACGCGCCGTTCAACATAGCAAACATCGGAGGGAAGCTGTACGTCACC TATGCTCTCTTGAACACCGACACGCTCCGTGACGATGTCTCCGGCCAGGGGCACGGCTTCGTCGAAGTTTTCAACCCGGA CGGCAGCTTCGTCATGAGCCTGCAGAGCGGAACCTGGCTCAACTCCCCCTGGGGCGTGGCTTTGGCGCCGGCGGATTTCG GCAAATTCAGCAACAGCGTGTTGATCGGGAACTTCGGCAGCGGCCAGATCGCGGCCTTCGATCAGACAAGCGGGAACTTC CAGGGACTCTTGAGAGATTCCTTCGGCGCGCCGATTGCCATCAACGGCCTCTGGGGCATCGGGTTTGGCAACGGCGGCAA TGCCGGCCCGGCCAGCACACTCTTCTTCGCCGCCGGCCTAAACGACGAAAGCGACGGGCTCTTAGGCACCATTACACCTG ATTGA
Upstream 100 bases:
>100_bases CTTCAAGTCAGCCAGTAACGGGGAGGAGGTGAGTCCACGAAAAGAAAAGTGGATCGATATCCGAGGGACAGGACAGTCAC CGAAAATAAGGAGGCACAAC
Downstream 100 bases:
>100_bases CGTCTGGTCGATCCCGCCGAAACCAACCGCCCCCAGGGATTCCGTTCCTCAGGGGCGGTTTTTTATTGTCCTATCCGACA TTGACGAAAACACTCCTCCT
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MWKKSLVTIIALAMAQVALIGCGNDHNTPPSATYHQTNLVSNIPGLAATTDAKLVNSWGITHSPTSGWWVSDNGSGFSTV YNGSGQPFPIATPLQVTIPLPTAPGTATSATPTGVVFNNFSGFNVTPGVRTTAARFIFVTEDGTISAWNTGAAATLKVDN ATFAAGTGPVYKGAAIATNGTSNNLYVANFRNKTVDVFDSNFAPVTLAGTPFTVPAPHVAPPAGYAPFNIANIGGKLYVT YALLNTDTLRDDVSGQGHGFVEVFNPDGSFVMSLQSGTWLNSPWGVALAPADFGKFSNSVLIGNFGSGQIAAFDQTSGNF QGLLRDSFGAPIAINGLWGIGFGNGGNAGPASTLFFAAGLNDESDGLLGTITPD
Sequences:
>Translated_374_residues MWKKSLVTIIALAMAQVALIGCGNDHNTPPSATYHQTNLVSNIPGLAATTDAKLVNSWGITHSPTSGWWVSDNGSGFSTV YNGSGQPFPIATPLQVTIPLPTAPGTATSATPTGVVFNNFSGFNVTPGVRTTAARFIFVTEDGTISAWNTGAAATLKVDN ATFAAGTGPVYKGAAIATNGTSNNLYVANFRNKTVDVFDSNFAPVTLAGTPFTVPAPHVAPPAGYAPFNIANIGGKLYVT YALLNTDTLRDDVSGQGHGFVEVFNPDGSFVMSLQSGTWLNSPWGVALAPADFGKFSNSVLIGNFGSGQIAAFDQTSGNF QGLLRDSFGAPIAINGLWGIGFGNGGNAGPASTLFFAAGLNDESDGLLGTITPD >Mature_374_residues MWKKSLVTIIALAMAQVALIGCGNDHNTPPSATYHQTNLVSNIPGLAATTDAKLVNSWGITHSPTSGWWVSDNGSGFSTV YNGSGQPFPIATPLQVTIPLPTAPGTATSATPTGVVFNNFSGFNVTPGVRTTAARFIFVTEDGTISAWNTGAAATLKVDN ATFAAGTGPVYKGAAIATNGTSNNLYVANFRNKTVDVFDSNFAPVTLAGTPFTVPAPHVAPPAGYAPFNIANIGGKLYVT YALLNTDTLRDDVSGQGHGFVEVFNPDGSFVMSLQSGTWLNSPWGVALAPADFGKFSNSVLIGNFGSGQIAAFDQTSGNF QGLLRDSFGAPIAINGLWGIGFGNGGNAGPASTLFFAAGLNDESDGLLGTITPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38465; Mature: 38465
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKKSLVTIIALAMAQVALIGCGNDHNTPPSATYHQTNLVSNIPGLAATTDAKLVNSWGI CCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEHHHHHHCCCCCEEECCCHHHCCCCC THSPTSGWWVSDNGSGFSTVYNGSGQPFPIATPLQVTIPLPTAPGTATSATPTGVVFNNF CCCCCCCEEECCCCCCEEEEECCCCCCCEECCCEEEEEECCCCCCCCCCCCCCCEEEECC SGFNVTPGVRTTAARFIFVTEDGTISAWNTGAAATLKVDNATFAAGTGPVYKGAAIATNG CCCEECCCCCEEEEEEEEEECCCEEEEECCCCEEEEEECCCEEECCCCCCCCCEEEEECC TSNNLYVANFRNKTVDVFDSNFAPVTLAGTPFTVPAPHVAPPAGYAPFNIANIGGKLYVT CCCCEEEEECCCCEEEEECCCCCEEEECCCCEECCCCCCCCCCCCCCEEEEECCCEEEEE YALLNTDTLRDDVSGQGHGFVEVFNPDGSFVMSLQSGTWLNSPWGVALAPADFGKFSNSV EEEEECCCHHHCCCCCCCEEEEEECCCCCEEEEEECCCEECCCCCEEECCCCCCCCCCCE LIGNFGSGQIAAFDQTSGNFQGLLRDSFGAPIAINGLWGIGFGNGGNAGPASTLFFAAGL EEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECC NDESDGLLGTITPD CCCCCCEEEEECCC >Mature Secondary Structure MWKKSLVTIIALAMAQVALIGCGNDHNTPPSATYHQTNLVSNIPGLAATTDAKLVNSWGI CCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEHHHHHHCCCCCEEECCCHHHCCCCC THSPTSGWWVSDNGSGFSTVYNGSGQPFPIATPLQVTIPLPTAPGTATSATPTGVVFNNF CCCCCCCEEECCCCCCEEEEECCCCCCCEECCCEEEEEECCCCCCCCCCCCCCCEEEECC SGFNVTPGVRTTAARFIFVTEDGTISAWNTGAAATLKVDNATFAAGTGPVYKGAAIATNG CCCEECCCCCEEEEEEEEEECCCEEEEECCCCEEEEEECCCEEECCCCCCCCCEEEEECC TSNNLYVANFRNKTVDVFDSNFAPVTLAGTPFTVPAPHVAPPAGYAPFNIANIGGKLYVT CCCCEEEEECCCCEEEEECCCCCEEEECCCCEECCCCCCCCCCCCCCEEEEECCCEEEEE YALLNTDTLRDDVSGQGHGFVEVFNPDGSFVMSLQSGTWLNSPWGVALAPADFGKFSNSV EEEEECCCHHHCCCCCCCEEEEEECCCCCEEEEEECCCEECCCCCEEECCCCCCCCCCCE LIGNFGSGQIAAFDQTSGNFQGLLRDSFGAPIAINGLWGIGFGNGGNAGPASTLFFAAGL EEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECC NDESDGLLGTITPD CCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA