| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is panE-1 [C]
Identifier: 197117182
GI number: 197117182
Start: 924141
End: 925064
Strand: Reverse
Name: panE-1 [C]
Synonym: Gbem_0788
Alternate gene names: 197117182
Gene position: 925064-924141 (Counterclockwise)
Preceding gene: 197117183
Following gene: 197117181
Centisome position: 20.04
GC content: 58.23
Gene sequence:
>924_bases ATGGGCGAATCAACTTACAAAACAACCATCATCGGTGCGGGGGCACTAGGGGCGGTTTACGGAAGCCTTCTCTTCAACAT GAACCCCGACGACGTCTGCTTTATCGCCAGCGGCGAACGTCACGACAGGCTGAAGAACGACGGGGTCACAGTCAACGGCA GGCGCTATGCGATAAAGGTGGCAAAGCCTGAAGAAGCAACGGCTGCAGATCTGGTCATTGTGGCCGTGAAGCACCACCAT CTTGACGAAGCGATTGCCGATATGAGCAAGGCGGTCGGATCCCAAACAGTCATTCTCTCGGTCATGAACGGCATCGACAG CGAGGAGCGCATCGGCGCTGCCTACGGAATGGAGAAGGTTCTGTATGGGCTCTCGCTCGGAATAGACGCCTTGAGGGAGG GGGGCGCCGTAACCTACAAGAACCTCGGCCGCATCCTGTTCGGCGAGCGGGAAAACAGGGAGTCGACCGAACGGGTCCGG CGCATCGCTTCCCTCTTCGACAGGGCCGGCATCGCCCATGAGGTCCCCCCCGACATGGTCCGCAGCCTCTGGTTCAAATA CATGATCAACGTAGGGGTGAACCAGGTCTCCGCACTCCTCGGGGCAACCTACGGCGCATTGAGAAACTCGCCCGAGGCAA GGGAGTTGATGGATACCGCCATGAGGGAAGTCATAGCCGTCGCCGTAGCAAAGAAGGTGAATCTGTCGGAAGACGATATA GGCGAGTGGTACAAGGTGCTGGCGACCTTGAGCGCGGAAGGAAAGACCTCGATGCTGCAGGACGTGGAGGCTGGAAGAAA GACGGAAGTCGAGATGCTGGCAGGTACAGTCATCGAGTTGGGCGGGCGCTGCGGCATACCGACGCCGGTAAACCGGAAGC TCTTTGACGACCTGAAACGTATAGAGTCCTTGCAGGAAGGATAG
Upstream 100 bases:
>100_bases TCCTCAGGGGCGGTTTTTTATTGTCCTATCCGACATTGACGAAAACACTCCTCCTGTGACACATTGGCGCGGCAGAAAAC TTCCAGATCCAGAGGCGGCA
Downstream 100 bases:
>100_bases CGACCCCGCCCTGGTTAACGCGGCGAATCAGCAAAAATCAGCACGAGAGGAAATCAACAGATGCAACAGATCGTGGACTT CATACTGGAACTGGACAAAC
Product: 2-dehydropantoate 2-reductase
Products: NA
Alternate protein names: Ketopantoate reductase; KPA reductase; KPR [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MGESTYKTTIIGAGALGAVYGSLLFNMNPDDVCFIASGERHDRLKNDGVTVNGRRYAIKVAKPEEATAADLVIVAVKHHH LDEAIADMSKAVGSQTVILSVMNGIDSEERIGAAYGMEKVLYGLSLGIDALREGGAVTYKNLGRILFGERENRESTERVR RIASLFDRAGIAHEVPPDMVRSLWFKYMINVGVNQVSALLGATYGALRNSPEARELMDTAMREVIAVAVAKKVNLSEDDI GEWYKVLATLSAEGKTSMLQDVEAGRKTEVEMLAGTVIELGGRCGIPTPVNRKLFDDLKRIESLQEG
Sequences:
>Translated_307_residues MGESTYKTTIIGAGALGAVYGSLLFNMNPDDVCFIASGERHDRLKNDGVTVNGRRYAIKVAKPEEATAADLVIVAVKHHH LDEAIADMSKAVGSQTVILSVMNGIDSEERIGAAYGMEKVLYGLSLGIDALREGGAVTYKNLGRILFGERENRESTERVR RIASLFDRAGIAHEVPPDMVRSLWFKYMINVGVNQVSALLGATYGALRNSPEARELMDTAMREVIAVAVAKKVNLSEDDI GEWYKVLATLSAEGKTSMLQDVEAGRKTEVEMLAGTVIELGGRCGIPTPVNRKLFDDLKRIESLQEG >Mature_306_residues GESTYKTTIIGAGALGAVYGSLLFNMNPDDVCFIASGERHDRLKNDGVTVNGRRYAIKVAKPEEATAADLVIVAVKHHHL DEAIADMSKAVGSQTVILSVMNGIDSEERIGAAYGMEKVLYGLSLGIDALREGGAVTYKNLGRILFGERENRESTERVRR IASLFDRAGIAHEVPPDMVRSLWFKYMINVGVNQVSALLGATYGALRNSPEARELMDTAMREVIAVAVAKKVNLSEDDIG EWYKVLATLSAEGKTSMLQDVEAGRKTEVEMLAGTVIELGGRCGIPTPVNRKLFDDLKRIESLQEG
Specific function: Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid [H]
COG id: COG1893
COG function: function code H; Ketopantoate reductase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketopantoate reductase family [H]
Homologues:
Organism=Escherichia coli, GI1786627, Length=312, Percent_Identity=25.3205128205128, Blast_Score=84, Evalue=9e-18, Organism=Saccharomyces cerevisiae, GI6320057, Length=334, Percent_Identity=24.251497005988, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR003710 - InterPro: IPR013752 - InterPro: IPR013332 - InterPro: IPR013328 - InterPro: IPR016040 [H]
Pfam domain/function: PF02558 ApbA; PF08546 ApbA_C [H]
EC number: =1.1.1.169 [H]
Molecular weight: Translated: 33361; Mature: 33229
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGESTYKTTIIGAGALGAVYGSLLFNMNPDDVCFIASGERHDRLKNDGVTVNGRRYAIKV CCCCCEEEEEEECHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCEEECCCEEEEEE AKPEEATAADLVIVAVKHHHLDEAIADMSKAVGSQTVILSVMNGIDSEERIGAAYGMEKV ECCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHH LYGLSLGIDALREGGAVTYKNLGRILFGERENRESTERVRRIASLFDRAGIAHEVPPDMV HHHHHHCHHHHHCCCCEEHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH RSLWFKYMINVGVNQVSALLGATYGALRNSPEARELMDTAMREVIAVAVAKKVNLSEDDI HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH GEWYKVLATLSAEGKTSMLQDVEAGRKTEVEMLAGTVIELGGRCGIPTPVNRKLFDDLKR HHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH IESLQEG HHHHHCC >Mature Secondary Structure GESTYKTTIIGAGALGAVYGSLLFNMNPDDVCFIASGERHDRLKNDGVTVNGRRYAIKV CCCCEEEEEEECHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCEEECCCEEEEEE AKPEEATAADLVIVAVKHHHLDEAIADMSKAVGSQTVILSVMNGIDSEERIGAAYGMEKV ECCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHH LYGLSLGIDALREGGAVTYKNLGRILFGERENRESTERVRRIASLFDRAGIAHEVPPDMV HHHHHHCHHHHHCCCCEEHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH RSLWFKYMINVGVNQVSALLGATYGALRNSPEARELMDTAMREVIAVAVAKKVNLSEDDI HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH GEWYKVLATLSAEGKTSMLQDVEAGRKTEVEMLAGTVIELGGRCGIPTPVNRKLFDDLKR HHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH IESLQEG HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]