| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117167
Identifier: 197117167
GI number: 197117167
Start: 908695
End: 909150
Strand: Reverse
Name: 197117167
Synonym: Gbem_0772
Alternate gene names: NA
Gene position: 909150-908695 (Counterclockwise)
Preceding gene: 197117168
Following gene: 197117166
Centisome position: 19.7
GC content: 46.93
Gene sequence:
>456_bases ATGAAAAGAATGCAGAAGATTATTGTAATGGCGATAGTCACACTTTTACTCGGTTCAACAGTTACCTTTGCTGGTGAGCG TGAGAAAGCCATGGAAATGGTGAAAGCAGCAGTCGCCTATTACAACGCAAATGGTTTGGAAAAGGCCCTTGATGCTTTCA ATGATCCCAAGAGCCAGTTTGGGCAAGGTGAGCAATATATTATTGCCTTTACCTTTGACGGCACTTTGGTCGCCAATGCC CCCAAGCAAAATCTTGTCGGCCAGAACCTGCTCGAGGTCCCTGATTCCAATGGCAAAAAGTTTCGCAAGGAAATCGTAGA ACTGGCCAAAGCCAACAAATCAGGTTGGGTCGACTACGTGACCCAGAGTCCCAAGACCAAGGCGATGGAACAGAAGAGTA CCTACGTGGAGCGGGCTGGAGAGCTGGCAATAGGTTGTGGCATCTTTAAAAAATAA
Upstream 100 bases:
>100_bases CACACCGATATAGAGCTATAAAGAATTTCGCACCCTTTTGGCATTTCTGCCGCATATCCAGTAACTGCTGTAATACAGCA ACTAACCAAGGAGATCTCAA
Downstream 100 bases:
>100_bases CCACAATGAACCACGCGGTCGATTACAGGACCATCCATCCCAAGAACGAAGCCCCTTGAGCAAAAACCACCTATTTCAAG AAGATAGACGAACAGGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Methyl-Accepting Chemotaxis Protein; Cache Sensor Protein; Methyl-Accepting Chemotaxis Sensory Transducer; Multi-Sensor Hybrid Histidine Kinase; Cache Domain-Contain Protein; Cache Domain Family
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKRMQKIIVMAIVTLLLGSTVTFAGEREKAMEMVKAAVAYYNANGLEKALDAFNDPKSQFGQGEQYIIAFTFDGTLVANA PKQNLVGQNLLEVPDSNGKKFRKEIVELAKANKSGWVDYVTQSPKTKAMEQKSTYVERAGELAIGCGIFKK
Sequences:
>Translated_151_residues MKRMQKIIVMAIVTLLLGSTVTFAGEREKAMEMVKAAVAYYNANGLEKALDAFNDPKSQFGQGEQYIIAFTFDGTLVANA PKQNLVGQNLLEVPDSNGKKFRKEIVELAKANKSGWVDYVTQSPKTKAMEQKSTYVERAGELAIGCGIFKK >Mature_151_residues MKRMQKIIVMAIVTLLLGSTVTFAGEREKAMEMVKAAVAYYNANGLEKALDAFNDPKSQFGQGEQYIIAFTFDGTLVANA PKQNLVGQNLLEVPDSNGKKFRKEIVELAKANKSGWVDYVTQSPKTKAMEQKSTYVERAGELAIGCGIFKK
Specific function: Unknown
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16630; Mature: 16630
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRMQKIIVMAIVTLLLGSTVTFAGEREKAMEMVKAAVAYYNANGLEKALDAFNDPKSQF CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHH GQGEQYIIAFTFDGTLVANAPKQNLVGQNLLEVPDSNGKKFRKEIVELAKANKSGWVDYV CCCCEEEEEEEECCEEEECCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHH TQSPKTKAMEQKSTYVERAGELAIGCGIFKK CCCCHHHHHHHHHHHHHHHCCEEECCCCCCC >Mature Secondary Structure MKRMQKIIVMAIVTLLLGSTVTFAGEREKAMEMVKAAVAYYNANGLEKALDAFNDPKSQF CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHH GQGEQYIIAFTFDGTLVANAPKQNLVGQNLLEVPDSNGKKFRKEIVELAKANKSGWVDYV CCCCEEEEEEEECCEEEECCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHH TQSPKTKAMEQKSTYVERAGELAIGCGIFKK CCCCHHHHHHHHHHHHHHHCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA