| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117097
Identifier: 197117097
GI number: 197117097
Start: 830883
End: 831671
Strand: Direct
Name: 197117097
Synonym: Gbem_0701
Alternate gene names: NA
Gene position: 830883-831671 (Clockwise)
Preceding gene: 308535182
Following gene: 197117098
Centisome position: 18.0
GC content: 65.27
Gene sequence:
>789_bases ATGAAGACATTCCTTCTTGCTCTGCTGCTTTGGGCTTTTTGTGCCTTGCCTGCTGCCGCCGCAACCCTGGAAACACTGAC CTGGCACTTCTCGCCCCAGTATTTCACCTGGCAGGAGCGGGACAACGGGAGGCGGCTTCTCAAGGAGAGCGGCCCTCTCT TCTCCCTGGGGGGCGTTGCCGGTCTCGTCGCCGACTCCTCCTTTACCATACGGGGAAAGGGGGAGTTCTTCGGCGGCCAG GTCGGCTACCGGGGCGAGACACAGCCGCCGAACCCGCAACCCATCCGCACCGATGTGGCCTACTTCGGCACGCGCGAAGA GCTGGACCTGGGCTACCGGGTTTCAGGGGGGAGGGGCTGCCTGGAACCGTTCGCGGGGCTTGGGCACCGCTGGTGGTTGA GGGAGTTGCAGGATACCGCCACGGCCAGCGGCTCCGCCGTCAAGGGATATACAGAGCTGTGGCAGACGGTGTACGGACGC CTCGGTGCCCGGGGCGAGCTGGCGCTTTCCTCGGGGGGCGTGGCCTTCGCCGAGGGGGGCGCCAAGTACCCCTTCTACAC CGGAAACAGCGTCGATTTCGTCGACGGCGGCGTCGTCACCTTTCATCCCGGAGCCGCCTGGAGCGGGTTCGCCGAGACCG GTATCCGGATGGGGAACCTCAAGCTCGCCCTCTCATACGAGGGATTCCGGTTCTCCGCCTCGTCCCCGAAACGGGTGCAG GAGACACGCTACCTTCAGCCCGAATCCTCCTCCGACATCTTCGGCGCGAGCCTCGGATGGAGCTTCTGA
Upstream 100 bases:
>100_bases GGGCAGGCACCGGCCGCGCCGGTCGAGGAGAAGCCCAAGAAGCCGCGGGCTCCCCGCAAGAAAAAAGAAGAAGCGCCCGC AGAATAGCCAAGGGGAAGTG
Downstream 100 bases:
>100_bases CATCACCGATCCAGGGCGGTTCCCCACATGGAGCAGTTGGTCTACATAGCGCTTTTAGGCGCCCTCGGTTGTCTCTGCCG TTATTTCCTTTCCGGCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKTFLLALLLWAFCALPAAAATLETLTWHFSPQYFTWQERDNGRRLLKESGPLFSLGGVAGLVADSSFTIRGKGEFFGGQ VGYRGETQPPNPQPIRTDVAYFGTREELDLGYRVSGGRGCLEPFAGLGHRWWLRELQDTATASGSAVKGYTELWQTVYGR LGARGELALSSGGVAFAEGGAKYPFYTGNSVDFVDGGVVTFHPGAAWSGFAETGIRMGNLKLALSYEGFRFSASSPKRVQ ETRYLQPESSSDIFGASLGWSF
Sequences:
>Translated_262_residues MKTFLLALLLWAFCALPAAAATLETLTWHFSPQYFTWQERDNGRRLLKESGPLFSLGGVAGLVADSSFTIRGKGEFFGGQ VGYRGETQPPNPQPIRTDVAYFGTREELDLGYRVSGGRGCLEPFAGLGHRWWLRELQDTATASGSAVKGYTELWQTVYGR LGARGELALSSGGVAFAEGGAKYPFYTGNSVDFVDGGVVTFHPGAAWSGFAETGIRMGNLKLALSYEGFRFSASSPKRVQ ETRYLQPESSSDIFGASLGWSF >Mature_262_residues MKTFLLALLLWAFCALPAAAATLETLTWHFSPQYFTWQERDNGRRLLKESGPLFSLGGVAGLVADSSFTIRGKGEFFGGQ VGYRGETQPPNPQPIRTDVAYFGTREELDLGYRVSGGRGCLEPFAGLGHRWWLRELQDTATASGSAVKGYTELWQTVYGR LGARGELALSSGGVAFAEGGAKYPFYTGNSVDFVDGGVVTFHPGAAWSGFAETGIRMGNLKLALSYEGFRFSASSPKRVQ ETRYLQPESSSDIFGASLGWSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28475; Mature: 28475
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFLLALLLWAFCALPAAAATLETLTWHFSPQYFTWQERDNGRRLLKESGPLFSLGGVA CHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCHHHHHHCCCEEEECCEE GLVADSSFTIRGKGEFFGGQVGYRGETQPPNPQPIRTDVAYFGTREELDLGYRVSGGRGC EEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCHHHCCCCEEECCCCCH LEPFAGLGHRWWLRELQDTATASGSAVKGYTELWQTVYGRLGARGELALSSGGVAFAEGG HHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCC AKYPFYTGNSVDFVDGGVVTFHPGAAWSGFAETGIRMGNLKLALSYEGFRFSASSPKRVQ CCCCEEECCCCEEECCCEEEECCCCCCCCHHHHCEEECCEEEEEEECCEEECCCCCHHHH ETRYLQPESSSDIFGASLGWSF HHHCCCCCCCCCEEECCCCCCC >Mature Secondary Structure MKTFLLALLLWAFCALPAAAATLETLTWHFSPQYFTWQERDNGRRLLKESGPLFSLGGVA CHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCHHHHHHCCCEEEECCEE GLVADSSFTIRGKGEFFGGQVGYRGETQPPNPQPIRTDVAYFGTREELDLGYRVSGGRGC EEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCHHHCCCCEEECCCCCH LEPFAGLGHRWWLRELQDTATASGSAVKGYTELWQTVYGRLGARGELALSSGGVAFAEGG HHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCC AKYPFYTGNSVDFVDGGVVTFHPGAAWSGFAETGIRMGNLKLALSYEGFRFSASSPKRVQ CCCCEEECCCCEEECCCEEEECCCCCCCCHHHHCEEECCEEEEEEECCEEECCCCCHHHH ETRYLQPESSSDIFGASLGWSF HHHCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA