| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116983
Identifier: 197116983
GI number: 197116983
Start: 706165
End: 706710
Strand: Reverse
Name: 197116983
Synonym: Gbem_0586
Alternate gene names: NA
Gene position: 706710-706165 (Counterclockwise)
Preceding gene: 197116984
Following gene: 197116982
Centisome position: 15.31
GC content: 65.93
Gene sequence:
>546_bases ATGAGCAGGGAAGATATCGTAAGTGCCCTGCAGGGGCTGGACAGCCGCAGCAGGCAACGACTGGGCATAGCCGTCGCCGT GGTGCTGGCGGTCATCGTCGCCGTCACCGTCATCAACGGCAACATCTCGAAGCTTGCGCGAAAGCGCGCCGCGCGCGAGG CCGACATCGCCGAGATGATGCAGCTGAAGCTCCGCTACCAGAGCGCCAGCGCCGGCGCCCAGCGCCTCGCCAACCGCCTC ATGGCCACCAGGGCCGACGACTCCCCGGCGAAGATCGTGGAAGAGATCGGCATCAAGGGACGCGCCAGCCAGATCAAACC GGTGAAGGGGGAGGAGATCCCCGGCTACGTCGAGGACGCCGCCGAACTGCGCATGGAGGGGCTCACGGCCAACGAGGCGG TGAACCTTATCTACCGCCTGGAGAAGGGGGCGCGCCCGGTGACGGTCAAGAAGGCCTCGATCAAGCAGCGCTTCGACGAC CCCTCCAAGCTCGACCTGGCGCTCACCATCGCACTCATCAAGCCGGCACCTGCGGGAAGCAAATGA
Upstream 100 bases:
>100_bases CCGCGCCCCTTTTGAACCAGGCCGAGGTGAGCGAAACCAAGTCGCGCCCCGACGGCAGCGTTACCTTCACGCTGAGCGGG ACCATGAAGGGGGTGACCAG
Downstream 100 bases:
>100_bases AAAGACGCACCCTTTACCTTGCCTGCGGCATCCCTGCAGCTGTCGCCTGTTTCCTATTCCTGACCATCCTCTTCGTCCCC AGCCGCTCGGTGGAGGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSREDIVSALQGLDSRSRQRLGIAVAVVLAVIVAVTVINGNISKLARKRAAREADIAEMMQLKLRYQSASAGAQRLANRL MATRADDSPAKIVEEIGIKGRASQIKPVKGEEIPGYVEDAAELRMEGLTANEAVNLIYRLEKGARPVTVKKASIKQRFDD PSKLDLALTIALIKPAPAGSK
Sequences:
>Translated_181_residues MSREDIVSALQGLDSRSRQRLGIAVAVVLAVIVAVTVINGNISKLARKRAAREADIAEMMQLKLRYQSASAGAQRLANRL MATRADDSPAKIVEEIGIKGRASQIKPVKGEEIPGYVEDAAELRMEGLTANEAVNLIYRLEKGARPVTVKKASIKQRFDD PSKLDLALTIALIKPAPAGSK >Mature_180_residues SREDIVSALQGLDSRSRQRLGIAVAVVLAVIVAVTVINGNISKLARKRAAREADIAEMMQLKLRYQSASAGAQRLANRLM ATRADDSPAKIVEEIGIKGRASQIKPVKGEEIPGYVEDAAELRMEGLTANEAVNLIYRLEKGARPVTVKKASIKQRFDDP SKLDLALTIALIKPAPAGSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19514; Mature: 19383
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSREDIVSALQGLDSRSRQRLGIAVAVVLAVIVAVTVINGNISKLARKRAAREADIAEMM CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH QLKLRYQSASAGAQRLANRLMATRADDSPAKIVEEIGIKGRASQIKPVKGEEIPGYVEDA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH AELRMEGLTANEAVNLIYRLEKGARPVTVKKASIKQRFDDPSKLDLALTIALIKPAPAGS HHHHHHCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCHHHHEEEEEEECCCCCCC K C >Mature Secondary Structure SREDIVSALQGLDSRSRQRLGIAVAVVLAVIVAVTVINGNISKLARKRAAREADIAEMM CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH QLKLRYQSASAGAQRLANRLMATRADDSPAKIVEEIGIKGRASQIKPVKGEEIPGYVEDA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH AELRMEGLTANEAVNLIYRLEKGARPVTVKKASIKQRFDDPSKLDLALTIALIKPAPAGS HHHHHHCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCHHHHEEEEEEECCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA