| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116982
Identifier: 197116982
GI number: 197116982
Start: 705332
End: 706168
Strand: Reverse
Name: 197116982
Synonym: Gbem_0585
Alternate gene names: NA
Gene position: 706168-705332 (Counterclockwise)
Preceding gene: 197116983
Following gene: 197116981
Centisome position: 15.3
GC content: 64.52
Gene sequence:
>837_bases ATGAAAAGACGCACCCTTTACCTTGCCTGCGGCATCCCTGCAGCTGTCGCCTGTTTCCTATTCCTGACCATCCTCTTCGT CCCCAGCCGCTCGGTGGAGGGGCTCCTCATGCGGATCTGCGGCAACGCGGGGTACACCCTGCGCTGCACCGGCTTCGGCA AGATACTTCCCATCGGGTTCTCGGCCCGCACCCTGGAAATAGGCTCGGAGAAGGGGGCGCTTTTGCAGTTGCGCGACGCG AAGGTGCGTCTTGAGCTGCTCCCGCTTTTAGCCGGCAAGGCGGCCGTAGCCTGCAGCGGCGGCATCGGCGCGGGGGAAGT TAATGGGGAGATATTCCTCGGGAAAAACCCCGCCTGGGACCTTAAGTGCCGCGGCGTTCGCCTGGAGGAGATCCCCTTCT TCAAGAACGTGGCCGAGGCGAGCATCAAGGGAGAACTGCGTCTCACCGGGAAGCTCGCCCCCGGCAAAGACGGCGGGCAA GGCGATATGCAGCTGGAGGTGAAGGGCGCCGAGGTCGCCGGCCTCAAGGTGGGTTCCATGCCGCTTCCCGACGCGGCCTA CCGCGAGGTGCGCGGCGCACTCAAGATCGACAAGGGGCGCGCGGCCGTGAAGAGCTTCACCCTGAACGGCGACGGCATCT ACGTGCGGATCTCCGGCGACACGCAGCTAGCCAACCCTCTGGGAACGTCGCCGCTCAACCTCACCATGGAGATGATGCCC AAGCCCGCGTTCCTGGAGCGGCAGAAGTTCGTATTCCTGCTCCTCACCAAGTACCAAAGCTCCCCCGGTGCCTTCAGCAT CCCGATCCGCGGCACGCTGGCGCACCCCTCCATCTGA
Upstream 100 bases:
>100_bases CGGTCAAGAAGGCCTCGATCAAGCAGCGCTTCGACGACCCCTCCAAGCTCGACCTGGCGCTCACCATCGCACTCATCAAG CCGGCACCTGCGGGAAGCAA
Downstream 100 bases:
>100_bases ACCGGGAGTGGAGATTATTCGTCGCGAATGCTAACAGCATACTGCGCGCATTCTACCTTGCGGGTCCGAATATACGGCGT GTCGTCACCCGTACTGGGCC
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MKRRTLYLACGIPAAVACFLFLTILFVPSRSVEGLLMRICGNAGYTLRCTGFGKILPIGFSARTLEIGSEKGALLQLRDA KVRLELLPLLAGKAAVACSGGIGAGEVNGEIFLGKNPAWDLKCRGVRLEEIPFFKNVAEASIKGELRLTGKLAPGKDGGQ GDMQLEVKGAEVAGLKVGSMPLPDAAYREVRGALKIDKGRAAVKSFTLNGDGIYVRISGDTQLANPLGTSPLNLTMEMMP KPAFLERQKFVFLLLTKYQSSPGAFSIPIRGTLAHPSI
Sequences:
>Translated_278_residues MKRRTLYLACGIPAAVACFLFLTILFVPSRSVEGLLMRICGNAGYTLRCTGFGKILPIGFSARTLEIGSEKGALLQLRDA KVRLELLPLLAGKAAVACSGGIGAGEVNGEIFLGKNPAWDLKCRGVRLEEIPFFKNVAEASIKGELRLTGKLAPGKDGGQ GDMQLEVKGAEVAGLKVGSMPLPDAAYREVRGALKIDKGRAAVKSFTLNGDGIYVRISGDTQLANPLGTSPLNLTMEMMP KPAFLERQKFVFLLLTKYQSSPGAFSIPIRGTLAHPSI >Mature_278_residues MKRRTLYLACGIPAAVACFLFLTILFVPSRSVEGLLMRICGNAGYTLRCTGFGKILPIGFSARTLEIGSEKGALLQLRDA KVRLELLPLLAGKAAVACSGGIGAGEVNGEIFLGKNPAWDLKCRGVRLEEIPFFKNVAEASIKGELRLTGKLAPGKDGGQ GDMQLEVKGAEVAGLKVGSMPLPDAAYREVRGALKIDKGRAAVKSFTLNGDGIYVRISGDTQLANPLGTSPLNLTMEMMP KPAFLERQKFVFLLLTKYQSSPGAFSIPIRGTLAHPSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29637; Mature: 29637
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRTLYLACGIPAAVACFLFLTILFVPSRSVEGLLMRICGNAGYTLRCTGFGKILPIGF CCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCEEEECC SARTLEIGSEKGALLQLRDAKVRLELLPLLAGKAAVACSGGIGAGEVNGEIFLGKNPAWD CEEEEEECCCCCCEEEEECCEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEECCCCCCC LKCRGVRLEEIPFFKNVAEASIKGELRLTGKLAPGKDGGQGDMQLEVKGAEVAGLKVGSM EEECCEEEECCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEECCEEEEEEECCC PLPDAAYREVRGALKIDKGRAAVKSFTLNGDGIYVRISGDTQLANPLGTSPLNLTMEMMP CCCHHHHHHHHCCEEECCCCEEEEEEEECCCEEEEEECCCCEECCCCCCCCCEEEEECCC KPAFLERQKFVFLLLTKYQSSPGAFSIPIRGTLAHPSI CCCHHCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCC >Mature Secondary Structure MKRRTLYLACGIPAAVACFLFLTILFVPSRSVEGLLMRICGNAGYTLRCTGFGKILPIGF CCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCEEEECC SARTLEIGSEKGALLQLRDAKVRLELLPLLAGKAAVACSGGIGAGEVNGEIFLGKNPAWD CEEEEEECCCCCCEEEEECCEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEECCCCCCC LKCRGVRLEEIPFFKNVAEASIKGELRLTGKLAPGKDGGQGDMQLEVKGAEVAGLKVGSM EEECCEEEECCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEECCEEEEEEECCC PLPDAAYREVRGALKIDKGRAAVKSFTLNGDGIYVRISGDTQLANPLGTSPLNLTMEMMP CCCHHHHHHHHCCEEECCCCEEEEEEEECCCEEEEEECCCCEECCCCCCCCCEEEEECCC KPAFLERQKFVFLLLTKYQSSPGAFSIPIRGTLAHPSI CCCHHCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA