Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116982

Identifier: 197116982

GI number: 197116982

Start: 705332

End: 706168

Strand: Reverse

Name: 197116982

Synonym: Gbem_0585

Alternate gene names: NA

Gene position: 706168-705332 (Counterclockwise)

Preceding gene: 197116983

Following gene: 197116981

Centisome position: 15.3

GC content: 64.52

Gene sequence:

>837_bases
ATGAAAAGACGCACCCTTTACCTTGCCTGCGGCATCCCTGCAGCTGTCGCCTGTTTCCTATTCCTGACCATCCTCTTCGT
CCCCAGCCGCTCGGTGGAGGGGCTCCTCATGCGGATCTGCGGCAACGCGGGGTACACCCTGCGCTGCACCGGCTTCGGCA
AGATACTTCCCATCGGGTTCTCGGCCCGCACCCTGGAAATAGGCTCGGAGAAGGGGGCGCTTTTGCAGTTGCGCGACGCG
AAGGTGCGTCTTGAGCTGCTCCCGCTTTTAGCCGGCAAGGCGGCCGTAGCCTGCAGCGGCGGCATCGGCGCGGGGGAAGT
TAATGGGGAGATATTCCTCGGGAAAAACCCCGCCTGGGACCTTAAGTGCCGCGGCGTTCGCCTGGAGGAGATCCCCTTCT
TCAAGAACGTGGCCGAGGCGAGCATCAAGGGAGAACTGCGTCTCACCGGGAAGCTCGCCCCCGGCAAAGACGGCGGGCAA
GGCGATATGCAGCTGGAGGTGAAGGGCGCCGAGGTCGCCGGCCTCAAGGTGGGTTCCATGCCGCTTCCCGACGCGGCCTA
CCGCGAGGTGCGCGGCGCACTCAAGATCGACAAGGGGCGCGCGGCCGTGAAGAGCTTCACCCTGAACGGCGACGGCATCT
ACGTGCGGATCTCCGGCGACACGCAGCTAGCCAACCCTCTGGGAACGTCGCCGCTCAACCTCACCATGGAGATGATGCCC
AAGCCCGCGTTCCTGGAGCGGCAGAAGTTCGTATTCCTGCTCCTCACCAAGTACCAAAGCTCCCCCGGTGCCTTCAGCAT
CCCGATCCGCGGCACGCTGGCGCACCCCTCCATCTGA

Upstream 100 bases:

>100_bases
CGGTCAAGAAGGCCTCGATCAAGCAGCGCTTCGACGACCCCTCCAAGCTCGACCTGGCGCTCACCATCGCACTCATCAAG
CCGGCACCTGCGGGAAGCAA

Downstream 100 bases:

>100_bases
ACCGGGAGTGGAGATTATTCGTCGCGAATGCTAACAGCATACTGCGCGCATTCTACCTTGCGGGTCCGAATATACGGCGT
GTCGTCACCCGTACTGGGCC

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKRRTLYLACGIPAAVACFLFLTILFVPSRSVEGLLMRICGNAGYTLRCTGFGKILPIGFSARTLEIGSEKGALLQLRDA
KVRLELLPLLAGKAAVACSGGIGAGEVNGEIFLGKNPAWDLKCRGVRLEEIPFFKNVAEASIKGELRLTGKLAPGKDGGQ
GDMQLEVKGAEVAGLKVGSMPLPDAAYREVRGALKIDKGRAAVKSFTLNGDGIYVRISGDTQLANPLGTSPLNLTMEMMP
KPAFLERQKFVFLLLTKYQSSPGAFSIPIRGTLAHPSI

Sequences:

>Translated_278_residues
MKRRTLYLACGIPAAVACFLFLTILFVPSRSVEGLLMRICGNAGYTLRCTGFGKILPIGFSARTLEIGSEKGALLQLRDA
KVRLELLPLLAGKAAVACSGGIGAGEVNGEIFLGKNPAWDLKCRGVRLEEIPFFKNVAEASIKGELRLTGKLAPGKDGGQ
GDMQLEVKGAEVAGLKVGSMPLPDAAYREVRGALKIDKGRAAVKSFTLNGDGIYVRISGDTQLANPLGTSPLNLTMEMMP
KPAFLERQKFVFLLLTKYQSSPGAFSIPIRGTLAHPSI
>Mature_278_residues
MKRRTLYLACGIPAAVACFLFLTILFVPSRSVEGLLMRICGNAGYTLRCTGFGKILPIGFSARTLEIGSEKGALLQLRDA
KVRLELLPLLAGKAAVACSGGIGAGEVNGEIFLGKNPAWDLKCRGVRLEEIPFFKNVAEASIKGELRLTGKLAPGKDGGQ
GDMQLEVKGAEVAGLKVGSMPLPDAAYREVRGALKIDKGRAAVKSFTLNGDGIYVRISGDTQLANPLGTSPLNLTMEMMP
KPAFLERQKFVFLLLTKYQSSPGAFSIPIRGTLAHPSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29637; Mature: 29637

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRTLYLACGIPAAVACFLFLTILFVPSRSVEGLLMRICGNAGYTLRCTGFGKILPIGF
CCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCEEEECC
SARTLEIGSEKGALLQLRDAKVRLELLPLLAGKAAVACSGGIGAGEVNGEIFLGKNPAWD
CEEEEEECCCCCCEEEEECCEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEECCCCCCC
LKCRGVRLEEIPFFKNVAEASIKGELRLTGKLAPGKDGGQGDMQLEVKGAEVAGLKVGSM
EEECCEEEECCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEECCEEEEEEECCC
PLPDAAYREVRGALKIDKGRAAVKSFTLNGDGIYVRISGDTQLANPLGTSPLNLTMEMMP
CCCHHHHHHHHCCEEECCCCEEEEEEEECCCEEEEEECCCCEECCCCCCCCCEEEEECCC
KPAFLERQKFVFLLLTKYQSSPGAFSIPIRGTLAHPSI
CCCHHCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCC
>Mature Secondary Structure
MKRRTLYLACGIPAAVACFLFLTILFVPSRSVEGLLMRICGNAGYTLRCTGFGKILPIGF
CCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCEEEECC
SARTLEIGSEKGALLQLRDAKVRLELLPLLAGKAAVACSGGIGAGEVNGEIFLGKNPAWD
CEEEEEECCCCCCEEEEECCEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEECCCCCCC
LKCRGVRLEEIPFFKNVAEASIKGELRLTGKLAPGKDGGQGDMQLEVKGAEVAGLKVGSM
EEECCEEEECCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEECCEEEEEEECCC
PLPDAAYREVRGALKIDKGRAAVKSFTLNGDGIYVRISGDTQLANPLGTSPLNLTMEMMP
CCCHHHHHHHHCCEEECCCCEEEEEEEECCCEEEEEECCCCEECCCCCCCCCEEEEECCC
KPAFLERQKFVFLLLTKYQSSPGAFSIPIRGTLAHPSI
CCCHHCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA