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The map label for this gene is 197116929

Identifier: 197116929

GI number: 197116929

Start: 640062

End: 640871

Strand: Reverse

Name: 197116929

Synonym: Gbem_0531

Alternate gene names: NA

Gene position: 640871-640062 (Counterclockwise)

Preceding gene: 197116930

Following gene: 197116925

Centisome position: 13.89

GC content: 61.85

Gene sequence:

>810_bases
ATGAGAAGCGTGAGAAGGGCGTTGTTTACAGTGATAGCCATGGCAGGCCTGATGGGATTGGTGACAGGTACAGGCTACGC
CGCCGGAACCAAACATTCCGGTACGCACCACAAAGCCGGGACCATGAGCAAAACTTCCAAGACGCACCACAAAACAATGA
CTCACAAAACAGGCAGCGCCAGAGGGACTGCTGGTGGTGGCCTGACAGAATCCAGCATGCCAAGCGGTGTGGGAGCACAT
TCCACCACCAGGCAGGATTTCAGCGTGGAAAAAGTGGGGCCGGAAACGGGTAGCGGCGGCGCAATGGGTACCGGTGCCGG
CGGAAACGTCGGTACTAGCGGAACTATGCAAAGAGGCACCGGCGGCACCTACGACCAGGGTACTGGCGGCACCATGCAAA
GAGGCACCGGCGGCACCTATGACCAGGGTACCGGCGACACTATGCAAAGAGGCACCGGCGGCACTTATGACCAGGGTACC
GGCGGCACCATGCAAAGAGGCACCGGCGGGACCTATGACCAGGGCACCGGCGGCACCATGCAAAGAGGCACCGGCGGAAC
CTATGACCAGGGTACTGGCGGCACCATGCAAAGAGGAACCGGTGGAACTTATGACCAGGGTACCGGTAGTATGGGGACCG
GTGGAACCACAGGAACTGGCAGCATGGGCACTGGCGGAACAACCGGCACCGGCAGCGGCGGCAGCATGGGTACTGGCGGA
ACAACCGGCACTGGCAGCGGCGGCAGCATGGGTACCGGCGGAACCACTGGCACTGGCAGCGGCGGCAGCATGGGTACCGG
CGGGAAGTAA

Upstream 100 bases:

>100_bases
GAACCAACCCCGAAGATGGCATCGCCGGTACAACGAAAGGAAGGAAACGGCGATGTCCCCCTCATGCTGTTAGATCAGCA
GAGGAACGGAGGTCCCAAAA

Downstream 100 bases:

>100_bases
AAGCCTTCAACCTGCCCAATAAAGCACTGAAGTTGAAAAGGGTTACAGATTTCTCTGTAACCCTTTTTTTATCTTATGCA
CCGGCGAAGCGAGTGCCACG

Product: octapeptide repeat-containing protein

Products: NA

Alternate protein names: Collagen Triple Helix Repeat Protein

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MRSVRRALFTVIAMAGLMGLVTGTGYAAGTKHSGTHHKAGTMSKTSKTHHKTMTHKTGSARGTAGGGLTESSMPSGVGAH
STTRQDFSVEKVGPETGSGGAMGTGAGGNVGTSGTMQRGTGGTYDQGTGGTMQRGTGGTYDQGTGDTMQRGTGGTYDQGT
GGTMQRGTGGTYDQGTGGTMQRGTGGTYDQGTGGTMQRGTGGTYDQGTGSMGTGGTTGTGSMGTGGTTGTGSGGSMGTGG
TTGTGSGGSMGTGGTTGTGSGGSMGTGGK

Sequences:

>Translated_269_residues
MRSVRRALFTVIAMAGLMGLVTGTGYAAGTKHSGTHHKAGTMSKTSKTHHKTMTHKTGSARGTAGGGLTESSMPSGVGAH
STTRQDFSVEKVGPETGSGGAMGTGAGGNVGTSGTMQRGTGGTYDQGTGGTMQRGTGGTYDQGTGDTMQRGTGGTYDQGT
GGTMQRGTGGTYDQGTGGTMQRGTGGTYDQGTGGTMQRGTGGTYDQGTGSMGTGGTTGTGSMGTGGTTGTGSGGSMGTGG
TTGTGSGGSMGTGGTTGTGSGGSMGTGGK
>Mature_269_residues
MRSVRRALFTVIAMAGLMGLVTGTGYAAGTKHSGTHHKAGTMSKTSKTHHKTMTHKTGSARGTAGGGLTESSMPSGVGAH
STTRQDFSVEKVGPETGSGGAMGTGAGGNVGTSGTMQRGTGGTYDQGTGGTMQRGTGGTYDQGTGDTMQRGTGGTYDQGT
GGTMQRGTGGTYDQGTGGTMQRGTGGTYDQGTGGTMQRGTGGTYDQGTGSMGTGGTTGTGSMGTGGTTGTGSGGSMGTGG
TTGTGSGGSMGTGGTTGTGSGGSMGTGGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25514; Mature: 25514

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA