| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is kup [H]
Identifier: 197116930
GI number: 197116930
Start: 641167
End: 642987
Strand: Reverse
Name: kup [H]
Synonym: Gbem_0532
Alternate gene names: 197116930
Gene position: 642987-641167 (Counterclockwise)
Preceding gene: 197116931
Following gene: 197116929
Centisome position: 13.93
GC content: 58.43
Gene sequence:
>1821_bases ATGAAACAAACTGCAGCAGCACCGCTTTGGAAAGACGTGGTGAAATCGTTCGGCCTGGTGTTCGGCGACATCGGCACCAG CCCCATCTACACCCTCACCGTCATCTTCGCCCTCACCAAGCCCACCTACGACAACGTAATGGGGATCCTCTCCCTGGTAT TCTGGACCATGACCATCCTGGTCAGCGCCGAGTACTCCTGGCTCGCCATGAAGCTCAGCCGCAAAGGAGAGGGGGGGACC ATCGTGCTCAAGGAGATCCTGGTGCGGCTCCTGAAGCCGGGGAGAACGGTCGCTTTCGTGGCCTTTCTCTCCTACCTCGG GGTCTCGCTCCTTTTGGGCGACGGCGTCATCACCCCCGCCATCAGTATCCTGTCGGCGGTCGAGGGGCTGGAACTGATAC CGGGACTGGAGCAGATGCCCCAAGCGGTGCTGATCTCGATAGCCGCGGCGATCGCGGTACTTTTGTTCGTGTTCCAATAC AAAGGCACCGACCGGGTGGCAAGCCTCTTCGGCCCTGTGATGGTGCTCTGGTTCGCCGCGCTCACCCTCTCCGGCCTCGC TTCGCTGCTGCAGCGCCCGGAACTGATTCAAGCCATGAACCCCGCTTACGCCCTCAAGTTCTTCCAGGACAACGGGTTCT CCTCCTTTTTCGTCCTCTCCGAGGTCATCCTGTGCGCCACCGGCGGGGAGGCGCTCTACGCCGACATGGGGCACCTAGGT CGCAAGCCGATCGTCATCGCCTGGTATTTCGCTTTTTGCGCGCTGGCAATCAATTACCTCGGCCAGGGCGCCTTCGTCCT CTCCCACGGCGGCGGGAAAAACATCCTTTTCTCCATGATTCAGCACCAGGCCCCCGTGCTCTACGTCCCCTTCCTGCTTC TCGCGGTCATGGCCACCATCATCGCCTCCCAGGCCATGATCAGCGGGGTGTTTTCCGTCATCTACCAAGGGATCAACACC CGCATCATGCCGCTTTTGAAGGTGGACTACACCTCAAGCCATCTGAAGTCCCAGATCTACATCAGCTCCGTCAACTGGTG CCTTTTGGCCGCCGTCATCTTCATCATGCTGGTTTTCCGCCGCTCGGAGAACCTCGCCGCCGCCTACGGGCTGGCGGTAA CCGGGACCATGACCATCACCGGGATCATGATGGTCATGATCTACCGCCGCACCTCCATGAAGTGGAAGGTCCCCTTCGCC GTCATCGTCACCGCTGTCGACCTGGTGTTTTTCACAGCCTGCCTCAACAAGATCCCCCATGGCGGCTACTGGTCCATCGT CCTCGCATCGATCCCCTTTGCCACCATAGTGGTCTGGACCATGGGGCAGCGGGCGCTCTACCGTGCCCTCAAGCCGCTCG ATCTCGACACCTTCCTCGTCTCCTATAATCAGATCTACGCCAAGGGAAAGAACATCCCCGGGACCGGGCTTTTTTTCACC AGGGAGACGCCGGTGGTACCACCCTATGTGGTGCATAGCATCATCAGAAGCAACATTATCTACGAGCGCAATATCTTCAT CTCCATGATCAGGACAGATGTCCCCTTCGGGCTCAAGAGCGCGCTTACCTCTGCGCTCGGCCCCGGGCTGGACGCCTTTG TCATCAAAGCTGGCTACATGGAGGTGGTAGAGATCGAGAAACTCTTGAAGGCGAACGGGATCGATGAAAAGGTCATCTTC TACGGTGTGGAGGACATCAAGACGGCCAATCCGTTCTGGAAATTTTTCGCCACTATGAAGAAACAGACCCCCAACTTCGT CCAGTTCCACAACCTCCCAGCAGGAAAACTACAGGGAGTGGTTACCAGGGTCGAAATGTAA
Upstream 100 bases:
>100_bases AGCATGGAATACGGCCATAAAGCCGCCTGTTCGTGCAGGCGGCTTTTTGCGTCCTGACGGGCTGTTTCCGCTCTTCGCAG TCCACTGCTCGGAGGAGCCC
Downstream 100 bases:
>100_bases ATAGCACAAAATCAGCCACTTACGCAGCATGACACTCGTTGCCTTTTTATATTTCGTGTGCTACCGTTAAGAAAAGGCGA AAGGGAAGATGTATGCAATA
Product: Kup system potassium transporter
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 606; Mature: 606
Protein sequence:
>606_residues MKQTAAAPLWKDVVKSFGLVFGDIGTSPIYTLTVIFALTKPTYDNVMGILSLVFWTMTILVSAEYSWLAMKLSRKGEGGT IVLKEILVRLLKPGRTVAFVAFLSYLGVSLLLGDGVITPAISILSAVEGLELIPGLEQMPQAVLISIAAAIAVLLFVFQY KGTDRVASLFGPVMVLWFAALTLSGLASLLQRPELIQAMNPAYALKFFQDNGFSSFFVLSEVILCATGGEALYADMGHLG RKPIVIAWYFAFCALAINYLGQGAFVLSHGGGKNILFSMIQHQAPVLYVPFLLLAVMATIIASQAMISGVFSVIYQGINT RIMPLLKVDYTSSHLKSQIYISSVNWCLLAAVIFIMLVFRRSENLAAAYGLAVTGTMTITGIMMVMIYRRTSMKWKVPFA VIVTAVDLVFFTACLNKIPHGGYWSIVLASIPFATIVVWTMGQRALYRALKPLDLDTFLVSYNQIYAKGKNIPGTGLFFT RETPVVPPYVVHSIIRSNIIYERNIFISMIRTDVPFGLKSALTSALGPGLDAFVIKAGYMEVVEIEKLLKANGIDEKVIF YGVEDIKTANPFWKFFATMKKQTPNFVQFHNLPAGKLQGVVTRVEM
Sequences:
>Translated_606_residues MKQTAAAPLWKDVVKSFGLVFGDIGTSPIYTLTVIFALTKPTYDNVMGILSLVFWTMTILVSAEYSWLAMKLSRKGEGGT IVLKEILVRLLKPGRTVAFVAFLSYLGVSLLLGDGVITPAISILSAVEGLELIPGLEQMPQAVLISIAAAIAVLLFVFQY KGTDRVASLFGPVMVLWFAALTLSGLASLLQRPELIQAMNPAYALKFFQDNGFSSFFVLSEVILCATGGEALYADMGHLG RKPIVIAWYFAFCALAINYLGQGAFVLSHGGGKNILFSMIQHQAPVLYVPFLLLAVMATIIASQAMISGVFSVIYQGINT RIMPLLKVDYTSSHLKSQIYISSVNWCLLAAVIFIMLVFRRSENLAAAYGLAVTGTMTITGIMMVMIYRRTSMKWKVPFA VIVTAVDLVFFTACLNKIPHGGYWSIVLASIPFATIVVWTMGQRALYRALKPLDLDTFLVSYNQIYAKGKNIPGTGLFFT RETPVVPPYVVHSIIRSNIIYERNIFISMIRTDVPFGLKSALTSALGPGLDAFVIKAGYMEVVEIEKLLKANGIDEKVIF YGVEDIKTANPFWKFFATMKKQTPNFVQFHNLPAGKLQGVVTRVEM >Mature_606_residues MKQTAAAPLWKDVVKSFGLVFGDIGTSPIYTLTVIFALTKPTYDNVMGILSLVFWTMTILVSAEYSWLAMKLSRKGEGGT IVLKEILVRLLKPGRTVAFVAFLSYLGVSLLLGDGVITPAISILSAVEGLELIPGLEQMPQAVLISIAAAIAVLLFVFQY KGTDRVASLFGPVMVLWFAALTLSGLASLLQRPELIQAMNPAYALKFFQDNGFSSFFVLSEVILCATGGEALYADMGHLG RKPIVIAWYFAFCALAINYLGQGAFVLSHGGGKNILFSMIQHQAPVLYVPFLLLAVMATIIASQAMISGVFSVIYQGINT RIMPLLKVDYTSSHLKSQIYISSVNWCLLAAVIFIMLVFRRSENLAAAYGLAVTGTMTITGIMMVMIYRRTSMKWKVPFA VIVTAVDLVFFTACLNKIPHGGYWSIVLASIPFATIVVWTMGQRALYRALKPLDLDTFLVSYNQIYAKGKNIPGTGLFFT RETPVVPPYVVHSIIRSNIIYERNIFISMIRTDVPFGLKSALTSALGPGLDAFVIKAGYMEVVEIEKLLKANGIDEKVIF YGVEDIKTANPFWKFFATMKKQTPNFVQFHNLPAGKLQGVVTRVEM
Specific function: Transport of potassium into the cell [H]
COG id: COG3158
COG function: function code P; K+ transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family [H]
Homologues:
Organism=Escherichia coli, GI48994960, Length=557, Percent_Identity=34.6499102333932, Blast_Score=311, Evalue=5e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003855 - InterPro: IPR023051 [H]
Pfam domain/function: PF02705 K_trans [H]
EC number: NA
Molecular weight: Translated: 66601; Mature: 66601
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQTAAAPLWKDVVKSFGLVFGDIGTSPIYTLTVIFALTKPTYDNVMGILSLVFWTMTIL CCCCCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VSAEYSWLAMKLSRKGEGGTIVLKEILVRLLKPGRTVAFVAFLSYLGVSLLLGDGVITPA HHCCCHHEEEEECCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHH ISILSAVEGLELIPGLEQMPQAVLISIAAAIAVLLFVFQYKGTDRVASLFGPVMVLWFAA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LTLSGLASLLQRPELIQAMNPAYALKFFQDNGFSSFFVLSEVILCATGGEALYADMGHLG HHHHHHHHHHCCCHHHHHCCHHHEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCC RKPIVIAWYFAFCALAINYLGQGAFVLSHGGGKNILFSMIQHQAPVLYVPFLLLAVMATI CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH IASQAMISGVFSVIYQGINTRIMPLLKVDYTSSHLKSQIYISSVNWCLLAAVIFIMLVFR HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHCEEEEEHHHHHHHHHHHHHHHHHH RSENLAAAYGLAVTGTMTITGIMMVMIYRRTSMKWKVPFAVIVTAVDLVFFTACLNKIPH CCCCCHHHHHHHEEHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHCCC GGYWSIVLASIPFATIVVWTMGQRALYRALKPLDLDTFLVSYNQIYAKGKNIPGTGLFFT CCHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE RETPVVPPYVVHSIIRSNIIYERNIFISMIRTDVPFGLKSALTSALGPGLDAFVIKAGYM CCCCCCCHHHHHHHHHHCCEEECHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEHHHHCHH EVVEIEKLLKANGIDEKVIFYGVEDIKTANPFWKFFATMKKQTPNFVQFHNLPAGKLQGV HHHHHHHHHHHCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHH VTRVEM HHHCCC >Mature Secondary Structure MKQTAAAPLWKDVVKSFGLVFGDIGTSPIYTLTVIFALTKPTYDNVMGILSLVFWTMTIL CCCCCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VSAEYSWLAMKLSRKGEGGTIVLKEILVRLLKPGRTVAFVAFLSYLGVSLLLGDGVITPA HHCCCHHEEEEECCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHH ISILSAVEGLELIPGLEQMPQAVLISIAAAIAVLLFVFQYKGTDRVASLFGPVMVLWFAA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LTLSGLASLLQRPELIQAMNPAYALKFFQDNGFSSFFVLSEVILCATGGEALYADMGHLG HHHHHHHHHHCCCHHHHHCCHHHEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCC RKPIVIAWYFAFCALAINYLGQGAFVLSHGGGKNILFSMIQHQAPVLYVPFLLLAVMATI CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH IASQAMISGVFSVIYQGINTRIMPLLKVDYTSSHLKSQIYISSVNWCLLAAVIFIMLVFR HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHCEEEEEHHHHHHHHHHHHHHHHHH RSENLAAAYGLAVTGTMTITGIMMVMIYRRTSMKWKVPFAVIVTAVDLVFFTACLNKIPH CCCCCHHHHHHHEEHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHCCC GGYWSIVLASIPFATIVVWTMGQRALYRALKPLDLDTFLVSYNQIYAKGKNIPGTGLFFT CCHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE RETPVVPPYVVHSIIRSNIIYERNIFISMIRTDVPFGLKSALTSALGPGLDAFVIKAGYM CCCCCCCHHHHHHHHHHCCEEECHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEHHHHCHH EVVEIEKLLKANGIDEKVIFYGVEDIKTANPFWKFFATMKKQTPNFVQFHNLPAGKLQGV HHHHHHHHHHHCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHH VTRVEM HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA