| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116910
Identifier: 197116910
GI number: 197116910
Start: 619695
End: 620147
Strand: Direct
Name: 197116910
Synonym: Gbem_0512
Alternate gene names: NA
Gene position: 619695-620147 (Clockwise)
Preceding gene: 197116909
Following gene: 197116911
Centisome position: 13.43
GC content: 58.5
Gene sequence:
>453_bases ATGAAAAAAGTTATGGTCATAGCGCTAGCAGTGAGCGCCGGCGTCCTTGGCGCGTGCTGCACACCGTGTGTTTCACCCAC AACCAATGAAGTCCCTATGTACCCGGTTACAGTGGGGGAGAAGACGTCGCTTTATGAAGTGGTGGCGCCCAATGCCCTGA GACTGGCTCCGGGTGTCGGCTTCAAGGAAGTACCAGGGCCCGGAGGGAAGAACAACGGCATAATCCTGATGAGGCCAAAC GGGGCTACCGGCGGATACATGGCCTGCGGATGCATCGGCGCGACAACGAGTTCCTGCGTGACGACTTCGGACAACCCGGA CCACCCATCCTGTAGCGGCGGCTGCAGCGACAGTGAAGGGAACCCGCAACCTTGCCAGTTGTTTGGGCCCATCATAGGCC CTCCGAGGGATCCTTTAATGATTCGATTCCTCGCCGGCCCGCTTCCACAATAA
Upstream 100 bases:
>100_bases TAGGAGAAGCCGTAACCGCTCAAGAAAAGGGCGACCTCGTTGAATACCTGAAGTCGATCTAGCGCCAGCACAACACCAAT GAAGGTTGAGGAGGGTACCG
Downstream 100 bases:
>100_bases AGGCGTATCCGCCTAAACATCAGGCTCCGTCGCTGGTGCGAGGCGTGCAAAAAAGGCAGTTATCTGTCACAGGTAGCTGC CTCTTTTGTTCTTGCCGGGG
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKKVMVIALAVSAGVLGACCTPCVSPTTNEVPMYPVTVGEKTSLYEVVAPNALRLAPGVGFKEVPGPGGKNNGIILMRPN GATGGYMACGCIGATTSSCVTTSDNPDHPSCSGGCSDSEGNPQPCQLFGPIIGPPRDPLMIRFLAGPLPQ
Sequences:
>Translated_150_residues MKKVMVIALAVSAGVLGACCTPCVSPTTNEVPMYPVTVGEKTSLYEVVAPNALRLAPGVGFKEVPGPGGKNNGIILMRPN GATGGYMACGCIGATTSSCVTTSDNPDHPSCSGGCSDSEGNPQPCQLFGPIIGPPRDPLMIRFLAGPLPQ >Mature_150_residues MKKVMVIALAVSAGVLGACCTPCVSPTTNEVPMYPVTVGEKTSLYEVVAPNALRLAPGVGFKEVPGPGGKNNGIILMRPN GATGGYMACGCIGATTSSCVTTSDNPDHPSCSGGCSDSEGNPQPCQLFGPIIGPPRDPLMIRFLAGPLPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15219; Mature: 15219
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVMVIALAVSAGVLGACCTPCVSPTTNEVPMYPVTVGEKTSLYEVVAPNALRLAPGVG CCCEEEEEEEHHCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEECCCCC FKEVPGPGGKNNGIILMRPNGATGGYMACGCIGATTSSCVTTSDNPDHPSCSGGCSDSEG CCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCC NPQPCQLFGPIIGPPRDPLMIRFLAGPLPQ CCCCEEEECCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MKKVMVIALAVSAGVLGACCTPCVSPTTNEVPMYPVTVGEKTSLYEVVAPNALRLAPGVG CCCEEEEEEEHHCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEECCCCC FKEVPGPGGKNNGIILMRPNGATGGYMACGCIGATTSSCVTTSDNPDHPSCSGGCSDSEG CCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCC NPQPCQLFGPIIGPPRDPLMIRFLAGPLPQ CCCCEEEECCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA