Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is yjgN [H]

Identifier: 197116911

GI number: 197116911

Start: 620497

End: 621723

Strand: Direct

Name: yjgN [H]

Synonym: Gbem_0513

Alternate gene names: 197116911

Gene position: 620497-621723 (Clockwise)

Preceding gene: 197116910

Following gene: 197116912

Centisome position: 13.44

GC content: 59.41

Gene sequence:

>1227_bases
ATGCCTTCAATAACTTTGACCTGCCCCGTTTGCAACTTCACAAAGCAGATGGACGTCAGCGCCATCCCGCGGCCGGGGAC
AACGGTCACCTGTCCCGTATGCAAGTCCCTTTTCCCGCTGCAAACCGATGCGCAGGGAGTTGCCTCGGAAGCAGGGAATA
CGCCTGCACTTCCTGAAGAGAACCAGACCCCGCCATCCTCGAAACCCGTCCGGCAAAGGCCGCGCACCCTCACTTTCGCA
TTCACCGGTGATGCCAGGGAATACTTCGGCATCTGGATCGTGAACACGCTGCTGCGCATCGTCACCTTGGGCTTTTATTC
TCCGTGGGCCAAGGTCCGGAAGCGGCGCTACTTTTGCGGCAACACGCTGCTCGACGGAGCGCCCTTCGATTACCTTGCGG
ACCCTTGGGCCATCCTCAAGGGGTGGCTGGTCGCTGGCCTGTTTTTCGGCCTCTATTCCCTTACCTCGAGGATCAGCCCG
CTCATATTCGCGGCTATCTCACTTCTTTTTCTGGGGATCTTCCCCTGGGTTGTGGTGCGGTCGCGTATCTTCAACCTCAG
GAACTCCACCCACCGCAATATCCATTTCGGCTTCAACCCGGAGTACCGCGAGGCGTATCGGGTTTTCCTCGGCTGGCAGT
TGCTGCTCCCGTTGACCATAGGCATCCTGGGTCCCTACGTTTTTTACCGCCAGTCCCGTTTCCTGGTGGAAAACAGCCGC
TACGGCACCACTCCATTCAGCTTCCACGCCACCGCCACGGATTACTTCAAGATCTTCCTCCCCCTGCTCGTCCTGATACC
TGTGGGGTTCGGTGCCGCCGTAGGGATCGGAGTCGGAGCGGGGGTGGGATTCCACAACGAGAAAGGCGCCGCAGTGGGTA
TCGTCTTCCTGCTTTTCGCCCTGGTATATCTGATAGCCGGCATTTATGTCAGAACCGCTCTCACCAACCTTGCCTGGAAT
TCAACCTCTCTGGGCCAGCACCGGTTCGCCTCTGCGCTCCGGGTACGCGATCTGCTTTGGATCTATCTCTCCAGCGCCGT
TGCCGTCATCTGCACGCTGGGGTTGCTTGCGCCTTGGGCTGTTGTGCGCATGGTCAGGTATCGCTTGGAGCGGACCACCG
TATCGGGTGTGGGCGGTTTCGATGCCATCCGGGCTTCAGAGGACCAGCAGGTAGGCGCCGGGCCTGAGGAACTGGTGGAC
ATGGTGGGGTTCGACCTGGGACTATGA

Upstream 100 bases:

>100_bases
GAAGTAGCTCTGCTACCCTCTGCCAACTGACCGGATACTTGCGTGAATGCAAGAACGGGCACTTCAGATCCTGTGAGTCC
CGTGCATTAAAGGAAAAAGG

Downstream 100 bases:

>100_bases
TCGATTCCTGCGCTGCATTCTGGTACGACGGCCGTACCTCGCAAAGGCGGGAGGTGACGGTGAGTCTCGTCGAGTGTTCT
TTGATAGTGTCCGGGCCGGA

Product: membrane protein

Products: NA

Alternate protein names: ORF X [H]

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MPSITLTCPVCNFTKQMDVSAIPRPGTTVTCPVCKSLFPLQTDAQGVASEAGNTPALPEENQTPPSSKPVRQRPRTLTFA
FTGDAREYFGIWIVNTLLRIVTLGFYSPWAKVRKRRYFCGNTLLDGAPFDYLADPWAILKGWLVAGLFFGLYSLTSRISP
LIFAAISLLFLGIFPWVVVRSRIFNLRNSTHRNIHFGFNPEYREAYRVFLGWQLLLPLTIGILGPYVFYRQSRFLVENSR
YGTTPFSFHATATDYFKIFLPLLVLIPVGFGAAVGIGVGAGVGFHNEKGAAVGIVFLLFALVYLIAGIYVRTALTNLAWN
STSLGQHRFASALRVRDLLWIYLSSAVAVICTLGLLAPWAVVRMVRYRLERTTVSGVGGFDAIRASEDQQVGAGPEELVD
MVGFDLGL

Sequences:

>Translated_408_residues
MPSITLTCPVCNFTKQMDVSAIPRPGTTVTCPVCKSLFPLQTDAQGVASEAGNTPALPEENQTPPSSKPVRQRPRTLTFA
FTGDAREYFGIWIVNTLLRIVTLGFYSPWAKVRKRRYFCGNTLLDGAPFDYLADPWAILKGWLVAGLFFGLYSLTSRISP
LIFAAISLLFLGIFPWVVVRSRIFNLRNSTHRNIHFGFNPEYREAYRVFLGWQLLLPLTIGILGPYVFYRQSRFLVENSR
YGTTPFSFHATATDYFKIFLPLLVLIPVGFGAAVGIGVGAGVGFHNEKGAAVGIVFLLFALVYLIAGIYVRTALTNLAWN
STSLGQHRFASALRVRDLLWIYLSSAVAVICTLGLLAPWAVVRMVRYRLERTTVSGVGGFDAIRASEDQQVGAGPEELVD
MVGFDLGL
>Mature_407_residues
PSITLTCPVCNFTKQMDVSAIPRPGTTVTCPVCKSLFPLQTDAQGVASEAGNTPALPEENQTPPSSKPVRQRPRTLTFAF
TGDAREYFGIWIVNTLLRIVTLGFYSPWAKVRKRRYFCGNTLLDGAPFDYLADPWAILKGWLVAGLFFGLYSLTSRISPL
IFAAISLLFLGIFPWVVVRSRIFNLRNSTHRNIHFGFNPEYREAYRVFLGWQLLLPLTIGILGPYVFYRQSRFLVENSRY
GTTPFSFHATATDYFKIFLPLLVLIPVGFGAAVGIGVGAGVGFHNEKGAAVGIVFLLFALVYLIAGIYVRTALTNLAWNS
TSLGQHRFASALRVRDLLWIYLSSAVAVICTLGLLAPWAVVRMVRYRLERTTVSGVGGFDAIRASEDQQVGAGPEELVDM
VGFDLGL

Specific function: Unknown

COG id: COG4269

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010295 [H]

Pfam domain/function: PF05987 DUF898 [H]

EC number: NA

Molecular weight: Translated: 45113; Mature: 44982

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSITLTCPVCNFTKQMDVSAIPRPGTTVTCPVCKSLFPLQTDAQGVASEAGNTPALPEE
CCCEEEECCCCCCHHHCCCCCCCCCCCEEEHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
NQTPPSSKPVRQRPRTLTFAFTGDAREYFGIWIVNTLLRIVTLGFYSPWAKVRKRRYFCG
CCCCCCCCCHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
NTLLDGAPFDYLADPWAILKGWLVAGLFFGLYSLTSRISPLIFAAISLLFLGIFPWVVVR
CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRIFNLRNSTHRNIHFGFNPEYREAYRVFLGWQLLLPLTIGILGPYVFYRQSRFLVENSR
HHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCC
YGTTPFSFHATATDYFKIFLPLLVLIPVGFGAAVGIGVGAGVGFHNEKGAAVGIVFLLFA
CCCCCCEEECCHHHHHHHHHHHHHHHHCCCHHHHHCCHHCCCCCCCCCCHHHHHHHHHHH
LVYLIAGIYVRTALTNLAWNSTSLGQHRFASALRVRDLLWIYLSSAVAVICTLGLLAPWA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVRMVRYRLERTTVSGVGGFDAIRASEDQQVGAGPEELVDMVGFDLGL
HHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSITLTCPVCNFTKQMDVSAIPRPGTTVTCPVCKSLFPLQTDAQGVASEAGNTPALPEE
CCEEEECCCCCCHHHCCCCCCCCCCCEEEHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
NQTPPSSKPVRQRPRTLTFAFTGDAREYFGIWIVNTLLRIVTLGFYSPWAKVRKRRYFCG
CCCCCCCCCHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
NTLLDGAPFDYLADPWAILKGWLVAGLFFGLYSLTSRISPLIFAAISLLFLGIFPWVVVR
CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRIFNLRNSTHRNIHFGFNPEYREAYRVFLGWQLLLPLTIGILGPYVFYRQSRFLVENSR
HHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCC
YGTTPFSFHATATDYFKIFLPLLVLIPVGFGAAVGIGVGAGVGFHNEKGAAVGIVFLLFA
CCCCCCEEECCHHHHHHHHHHHHHHHHCCCHHHHHCCHHCCCCCCCCCCHHHHHHHHHHH
LVYLIAGIYVRTALTNLAWNSTSLGQHRFASALRVRDLLWIYLSSAVAVICTLGLLAPWA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVRMVRYRLERTTVSGVGGFDAIRASEDQQVGAGPEELVDMVGFDLGL
HHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609; 8253666 [H]