| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116841
Identifier: 197116841
GI number: 197116841
Start: 525847
End: 526029
Strand: Direct
Name: 197116841
Synonym: Gbem_0443
Alternate gene names: NA
Gene position: 525847-526029 (Clockwise)
Preceding gene: 197116840
Following gene: 197116842
Centisome position: 11.39
GC content: 49.73
Gene sequence:
>183_bases ATGCCCGTTGTACGTGTTACCTGGTTTGAAGGTAAAGACACCCAAACCAAAAAGGCAGTTGCAGCTGAGATCACTGAAAG CATCGTCAGGAATACCGGTACAGATCCGAAGTACATCTACGTCATCTTCGAAGACGTGGCGCCATCTGACTGGGCTGGGG AAGGGAAGTTGTTCAGCGAATGA
Upstream 100 bases:
>100_bases CGTGAATTTCTGGAACGCTGATCCGAAGATAGTCATTCGTCGCCTGAGCACACTAGCAGGCAGGCAAACCAACCACATTT CCCGATTCAAGGAGGACGTC
Downstream 100 bases:
>100_bases ATCGGGAGGTATCATAGGGCCTTCCGTGTTCACCCGTACAAGTAACTAAACGAACCAGCACTGAGTGAACCGAATATAAT GGCCCCGGCGTTGCCTGCTT
Product: 4-oxalocrotonate tautomerase superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MPVVRVTWFEGKDTQTKKAVAAEITESIVRNTGTDPKYIYVIFEDVAPSDWAGEGKLFSE
Sequences:
>Translated_60_residues MPVVRVTWFEGKDTQTKKAVAAEITESIVRNTGTDPKYIYVIFEDVAPSDWAGEGKLFSE >Mature_59_residues PVVRVTWFEGKDTQTKKAVAAEITESIVRNTGTDPKYIYVIFEDVAPSDWAGEGKLFSE
Specific function: Unknown
COG id: COG1942
COG function: function code R; Uncharacterized protein, 4-oxalocrotonate tautomerase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-oxalocrotonate tautomerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004370 - InterPro: IPR014347 [H]
Pfam domain/function: PF01361 Tautomerase [H]
EC number: NA
Molecular weight: Translated: 6723; Mature: 6591
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVVRVTWFEGKDTQTKKAVAAEITESIVRNTGTDPKYIYVIFEDVAPSDWAGEGKLFSE CCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure PVVRVTWFEGKDTQTKKAVAAEITESIVRNTGTDPKYIYVIFEDVAPSDWAGEGKLFSE CEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]