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The map label for this gene is 197116838

Identifier: 197116838

GI number: 197116838

Start: 523800

End: 524240

Strand: Direct

Name: 197116838

Synonym: Gbem_0440

Alternate gene names: NA

Gene position: 523800-524240 (Clockwise)

Preceding gene: 197116822

Following gene: 197116839

Centisome position: 11.35

GC content: 48.75

Gene sequence:

>441_bases
ATGAGTACTCCAGCCCCACGGAACGTCATCGATCAAATTGCCAAGATACGTGAGGCGGCTAATCTGCTGATTGAAAGAGA
GCTCCAGCGGCGTGGCATCACGGGTATTGTGCCGGCCCATGGTTTGGTGTTCTCATTCCTTTTTCGCCAAAACGAGGCAA
TTCCTATTAAAGCCCTGGTTCAGCAGTCCGGTAGAGTGAAATCAACAGTGACGGGGATGATAAATACTCTCGAAAAGCAT
GGATACATCTACAAGCAGAATTGCTCCGACGATGCGCGCTCTACGCTTATCGGTCTTACCGAAAGAGGCAACGCGATCCG
GCGTGATTTTGAAGAGATCTCGGTTATTTTGGAAAAGCAGGTGTATGGAGAGATGTTGCAGGATGACCGCGAGTGTCTTA
TGAAACTCTTGTCCGTAATCGAAAACAATCTGAAGGCGTGA

Upstream 100 bases:

>100_bases
TGAGCATGATCATAAAAAATGCCGAGCGAGCAGCGAAAGTGGTATGCGGGGGGCTCAGAAAGTTCTTGACTTTAGTTCGT
GGCCGAACTATACATGAGGC

Downstream 100 bases:

>100_bases
TTTTTTTTACCAATTTGGTTCGGCCGCGAACTTTTTTCGAGCGTAAGTGTCCGCCATCGAGGCGCCACTTCAATAACTGT
GTAGCCATGCGGTTTACACA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: MarR Family Transcriptional Regulator; Transcriptional Regulator; MarR-Family Transcriptional Regulator; MarR Family Helix-Turn-Helix Transcriptional Regulator; Transcriptional Regulator Marr Family

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSTPAPRNVIDQIAKIREAANLLIERELQRRGITGIVPAHGLVFSFLFRQNEAIPIKALVQQSGRVKSTVTGMINTLEKH
GYIYKQNCSDDARSTLIGLTERGNAIRRDFEEISVILEKQVYGEMLQDDRECLMKLLSVIENNLKA

Sequences:

>Translated_146_residues
MSTPAPRNVIDQIAKIREAANLLIERELQRRGITGIVPAHGLVFSFLFRQNEAIPIKALVQQSGRVKSTVTGMINTLEKH
GYIYKQNCSDDARSTLIGLTERGNAIRRDFEEISVILEKQVYGEMLQDDRECLMKLLSVIENNLKA
>Mature_145_residues
STPAPRNVIDQIAKIREAANLLIERELQRRGITGIVPAHGLVFSFLFRQNEAIPIKALVQQSGRVKSTVTGMINTLEKHG
YIYKQNCSDDARSTLIGLTERGNAIRRDFEEISVILEKQVYGEMLQDDRECLMKLLSVIENNLKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16483; Mature: 16352

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPAPRNVIDQIAKIREAANLLIERELQRRGITGIVPAHGLVFSFLFRQNEAIPIKALV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
QQSGRVKSTVTGMINTLEKHGYIYKQNCSDDARSTLIGLTERGNAIRRDFEEISVILEKQ
HCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VYGEMLQDDRECLMKLLSVIENNLKA
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STPAPRNVIDQIAKIREAANLLIERELQRRGITGIVPAHGLVFSFLFRQNEAIPIKALV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
QQSGRVKSTVTGMINTLEKHGYIYKQNCSDDARSTLIGLTERGNAIRRDFEEISVILEKQ
HCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VYGEMLQDDRECLMKLLSVIENNLKA
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA