Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116822

Identifier: 197116822

GI number: 197116822

Start: 499491

End: 500102

Strand: Direct

Name: 197116822

Synonym: Gbem_0424

Alternate gene names: NA

Gene position: 499491-500102 (Clockwise)

Preceding gene: 197116821

Following gene: 197116838

Centisome position: 10.82

GC content: 52.94

Gene sequence:

>612_bases
ATGCCCTTGAGCAAATTGAGCCATCCCGAGATAATCACCAAGTCCGCAGTGGTGACTGCGACCTACAACAAGGAGATGTT
CGACTACCTTTTATCGCTCATCCCCACGCCTGACTTTTATATCGAGCTTCACGAACGATACGCGACCAATTTCGCGGGTT
CTCTGAAAGGAGACCCGGAGAAGATCAAAGCCTGCGCTGCGGATCGTCAGCTGATTGACCAAAACCTCTCCATCCTTTTG
GGTTTGGCCAAGGTTGTCACAGCTAAAGATCCCTCCGTGATGGAGTCTTTCGGTCTCAATCGCCCAGCGGAGAAAACAGC
GGCTTCCGCCGTCGTGCTGGAGCGTCCCAAGAATTTCAGGGTCAGTTTCGACAAGAAAGGTCATCCCCAGGTGTCACTCA
CAAAGATAATGGGCGCAAAGGGATACGAAGTGTGGGCCTGCGACGCCGATCCCAGCTTGGAAGAAAATTGGAGGCTGGTG
GAATGGTCGACGAAATGTCAGAGCATACCGATCACCGGATTGAACCGCACGCAACTCAACTGGCTCAGGATCAGAGGTAA
GCGGGGGGACATCTTCGGTCCCTGGTCCAATCCCATCAGTCTTTTCCCATAA

Upstream 100 bases:

>100_bases
GTTTTGGGTTATTTCCGAGGCCTTCAAGATTTTTTTTGACAGCGGCTAAAGCCCGTTTACTATTTTGGTGTATTGGAGAT
AGCTAATGCGGAGGTCGCAG

Downstream 100 bases:

>100_bases
CTCCACCCAAGCCCCCCTTGGCGACAACCAGGGGGGCTGGATCTTCCCGCTCTAACCTTCTCACCTCAATCAGCTAAATC
AACAAGTTCCGCAGTAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MPLSKLSHPEIITKSAVVTATYNKEMFDYLLSLIPTPDFYIELHERYATNFAGSLKGDPEKIKACAADRQLIDQNLSILL
GLAKVVTAKDPSVMESFGLNRPAEKTAASAVVLERPKNFRVSFDKKGHPQVSLTKIMGAKGYEVWACDADPSLEENWRLV
EWSTKCQSIPITGLNRTQLNWLRIRGKRGDIFGPWSNPISLFP

Sequences:

>Translated_203_residues
MPLSKLSHPEIITKSAVVTATYNKEMFDYLLSLIPTPDFYIELHERYATNFAGSLKGDPEKIKACAADRQLIDQNLSILL
GLAKVVTAKDPSVMESFGLNRPAEKTAASAVVLERPKNFRVSFDKKGHPQVSLTKIMGAKGYEVWACDADPSLEENWRLV
EWSTKCQSIPITGLNRTQLNWLRIRGKRGDIFGPWSNPISLFP
>Mature_202_residues
PLSKLSHPEIITKSAVVTATYNKEMFDYLLSLIPTPDFYIELHERYATNFAGSLKGDPEKIKACAADRQLIDQNLSILLG
LAKVVTAKDPSVMESFGLNRPAEKTAASAVVLERPKNFRVSFDKKGHPQVSLTKIMGAKGYEVWACDADPSLEENWRLVE
WSTKCQSIPITGLNRTQLNWLRIRGKRGDIFGPWSNPISLFP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22736; Mature: 22605

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSKLSHPEIITKSAVVTATYNKEMFDYLLSLIPTPDFYIELHERYATNFAGSLKGDPE
CCCCCCCCCCEEECCEEEEEECCHHHHHHHHHHCCCCHHEEHHHHHHHHCCCCCCCCCHH
KIKACAADRQLIDQNLSILLGLAKVVTAKDPSVMESFGLNRPAEKTAASAVVLERPKNFR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHEEECCCCCE
VSFDKKGHPQVSLTKIMGAKGYEVWACDADPSLEENWRLVEWSTKCQSIPITGLNRTQLN
EEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEE
WLRIRGKRGDIFGPWSNPISLFP
EEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLSKLSHPEIITKSAVVTATYNKEMFDYLLSLIPTPDFYIELHERYATNFAGSLKGDPE
CCCCCCCCCEEECCEEEEEECCHHHHHHHHHHCCCCHHEEHHHHHHHHCCCCCCCCCHH
KIKACAADRQLIDQNLSILLGLAKVVTAKDPSVMESFGLNRPAEKTAASAVVLERPKNFR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHEEECCCCCE
VSFDKKGHPQVSLTKIMGAKGYEVWACDADPSLEENWRLVEWSTKCQSIPITGLNRTQLN
EEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEE
WLRIRGKRGDIFGPWSNPISLFP
EEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA