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The map label for this gene is 197116837

Identifier: 197116837

GI number: 197116837

Start: 523014

End: 523631

Strand: Reverse

Name: 197116837

Synonym: Gbem_0439

Alternate gene names: NA

Gene position: 523631-523014 (Counterclockwise)

Preceding gene: 197116854

Following gene: 197116836

Centisome position: 11.35

GC content: 63.75

Gene sequence:

>618_bases
ATGCGTATCACCGAGCAGGCAAAACAGCAGTGCCGGGCACGGATCCTGGAGAAGGCATCCGAACTCTTTTGCGCCCGCGG
CTTCGACCAGACCACCACCCGCGACATCGCGCTTGCCGCAGGGGTCGCCGCAGGAACCATGTTCAATTACTTCCCCAGCA
AGGAGACGATGGCGATGACCATGGTCTCCGACGCGCTCGCCGAAGGGGAGGCGGAATTCCGGGGTCGCACCTGCGGCGAG
CTTGTCGAGGATCTCTTCGGCTTCATCGCCTCGGGGCTTCGCAGGCTGCGCCCCCTGCGCCCTTTCCTCGGCCCCGTGCT
GGAGCGCTCGCTAAGCCCGTTCCCGCGCAAGAACGTTTGCCCCGTGGGAGAGGCGGCGCGTCAGCGGCACCTCGACTTCA
TGCAGCAGATCCTGGCCAGGCACGGGTTCAGCTCCGCACCGGATTACGTCGCCACGACCATTTATTGGTCGCTCTACCTG
GGTGTGCTTGCCTTCTGGACCAGCGACCCGTCACCGAACCAGGAAGCCAGCCAGGCGCTGGTCGACTACTCGGTCCGTAC
TTTTGTGCATATTATCTCCGGCAGCGCCGGGGTAGATGGAGGTGAGCATGTCCTGTAA

Upstream 100 bases:

>100_bases
TGCTCGCTCGGCATTTTTTATGATCATGCTCATTTTATCGTTGACGAAAAATTAGCTTCTGCTATAGTGAGCGCGTTCAC
ATTTTACGGATGGAGCTTCA

Downstream 100 bases:

>100_bases
CGTCGCAGTGGCACCCGCCAGCCGCGAGCGCCTTATGCAGCTCCTGCCGCGAGACGAAGACGCCGCCGCTCGCCAGAGGC
TTGCCGAGCTGGTCGAGACC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MRITEQAKQQCRARILEKASELFCARGFDQTTTRDIALAAGVAAGTMFNYFPSKETMAMTMVSDALAEGEAEFRGRTCGE
LVEDLFGFIASGLRRLRPLRPFLGPVLERSLSPFPRKNVCPVGEAARQRHLDFMQQILARHGFSSAPDYVATTIYWSLYL
GVLAFWTSDPSPNQEASQALVDYSVRTFVHIISGSAGVDGGEHVL

Sequences:

>Translated_205_residues
MRITEQAKQQCRARILEKASELFCARGFDQTTTRDIALAAGVAAGTMFNYFPSKETMAMTMVSDALAEGEAEFRGRTCGE
LVEDLFGFIASGLRRLRPLRPFLGPVLERSLSPFPRKNVCPVGEAARQRHLDFMQQILARHGFSSAPDYVATTIYWSLYL
GVLAFWTSDPSPNQEASQALVDYSVRTFVHIISGSAGVDGGEHVL
>Mature_205_residues
MRITEQAKQQCRARILEKASELFCARGFDQTTTRDIALAAGVAAGTMFNYFPSKETMAMTMVSDALAEGEAEFRGRTCGE
LVEDLFGFIASGLRRLRPLRPFLGPVLERSLSPFPRKNVCPVGEAARQRHLDFMQQILARHGFSSAPDYVATTIYWSLYL
GVLAFWTSDPSPNQEASQALVDYSVRTFVHIISGSAGVDGGEHVL

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22628; Mature: 22628

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITEQAKQQCRARILEKASELFCARGFDQTTTRDIALAAGVAAGTMFNYFPSKETMAMT
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MVSDALAEGEAEFRGRTCGELVEDLFGFIASGLRRLRPLRPFLGPVLERSLSPFPRKNVC
HHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PVGEAARQRHLDFMQQILARHGFSSAPDYVATTIYWSLYLGVLAFWTSDPSPNQEASQAL
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VDYSVRTFVHIISGSAGVDGGEHVL
HHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRITEQAKQQCRARILEKASELFCARGFDQTTTRDIALAAGVAAGTMFNYFPSKETMAMT
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MVSDALAEGEAEFRGRTCGELVEDLFGFIASGLRRLRPLRPFLGPVLERSLSPFPRKNVC
HHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PVGEAARQRHLDFMQQILARHGFSSAPDYVATTIYWSLYLGVLAFWTSDPSPNQEASQAL
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VDYSVRTFVHIISGSAGVDGGEHVL
HHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA