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The map label for this gene is yciH [H]

Identifier: 197116811

GI number: 197116811

Start: 489753

End: 490121

Strand: Direct

Name: yciH [H]

Synonym: Gbem_0413

Alternate gene names: 197116811

Gene position: 489753-490121 (Clockwise)

Preceding gene: 197116810

Following gene: 197116813

Centisome position: 10.61

GC content: 62.87

Gene sequence:

>369_bases
ATGAAAAAGACCAGCTCCAACAACGACGCCCCCGTAGTCTACTCCTCCGAATTCGGCCGCATGTGCCCGGGTTGCGGCAA
GCCCCTCAAGGATTGCGTTTGCCGCAAGAACGCCTCAGCCCCTGCAGGCGACGGCGTAGTGCGTCTAAGGCGCGAAACAA
AAGGGAGAGGCGGCAAGACAGTCATCGTCATTGCCGGCCTCCCCCTCGATGCAGATAAACTCACCGCCCTTGCCGGAGAG
CTGAAACGCCGCTGCGGCTGCGGCGGTACCGCCAAAGACGGCATAATCGAGATCCAGGGCGACCACGCCGACGTCCTTTT
AGCCGAACTCGCCAAGCGCGGCTACAAGGCCAAGCGCGCCGGCGGCTAG

Upstream 100 bases:

>100_bases
AAAACTCCTGGTTTGCTTTGCGCCTTTGCGGCTTTGCGTGAGACGCTTTTTGCTTTTCTTATCTTGTATCCTCAGCGTCT
TTTCTGCTACAAAAGCCCCT

Downstream 100 bases:

>100_bases
TTTGAAGCTATTCCACCAGGAACGTCTTTTTCTCGACTTGAACCTTGTCGCCGCGGCGCAGTTTCCTGCCGCGGCGCAGT
TCCACCTCGCCGTTCACCGA

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKKTSSNNDAPVVYSSEFGRMCPGCGKPLKDCVCRKNASAPAGDGVVRLRRETKGRGGKTVIVIAGLPLDADKLTALAGE
LKRRCGCGGTAKDGIIEIQGDHADVLLAELAKRGYKAKRAGG

Sequences:

>Translated_122_residues
MKKTSSNNDAPVVYSSEFGRMCPGCGKPLKDCVCRKNASAPAGDGVVRLRRETKGRGGKTVIVIAGLPLDADKLTALAGE
LKRRCGCGGTAKDGIIEIQGDHADVLLAELAKRGYKAKRAGG
>Mature_122_residues
MKKTSSNNDAPVVYSSEFGRMCPGCGKPLKDCVCRKNASAPAGDGVVRLRRETKGRGGKTVIVIAGLPLDADKLTALAGE
LKRRCGCGGTAKDGIIEIQGDHADVLLAELAKRGYKAKRAGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=117, Percent_Identity=47.8632478632479, Blast_Score=101, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 12714; Mature: 12714

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTSSNNDAPVVYSSEFGRMCPGCGKPLKDCVCRKNASAPAGDGVVRLRRETKGRGGKT
CCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEHHCCCCCCCE
VIVIAGLPLDADKLTALAGELKRRCGCGGTAKDGIIEIQGDHADVLLAELAKRGYKAKRA
EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCC
GG
CC
>Mature Secondary Structure
MKKTSSNNDAPVVYSSEFGRMCPGCGKPLKDCVCRKNASAPAGDGVVRLRRETKGRGGKT
CCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEHHCCCCCCCE
VIVIAGLPLDADKLTALAGELKRRCGCGGTAKDGIIEIQGDHADVLLAELAKRGYKAKRA
EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCC
GG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2956254; 9097039; 9278503; 10497266 [H]