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The map label for this gene is efp-1 [H]

Identifier: 197116813

GI number: 197116813

Start: 490423

End: 490986

Strand: Direct

Name: efp-1 [H]

Synonym: Gbem_0415

Alternate gene names: 197116813

Gene position: 490423-490986 (Clockwise)

Preceding gene: 197116811

Following gene: 308535162

Centisome position: 10.63

GC content: 58.87

Gene sequence:

>564_bases
ATGTACACTACCAATGATTTCAAGAAGGGTCTCGTCATCCAGTTGGACGGCGCTCCCTGCGTGTTAGTAGACGTAAGCTT
CCAGTCCCCGTCCGCCCGCGGCGCCAACACAATGGTCAAGACCAAGTACCGCAACCTGATCACCTCCCAGGTGCTGGAGA
AGACCTTCCGTTCCGGCGACAAGGTAGACGAAGCGGACTTCGAGCGCCACAAGGGGCAGTTCCTTTATGCCGACGGCGGC
CGCGGCGTCTTCATGGATCTGGAGACCTACGAGCAGTTCGAGATGGAAGAAGACAACTTCAGCGCCATAGCCCCCTTCCT
GTTGGACGGTACCGAAGTACAGCTCGGCATCTTCCAGGAGCGCATGGTCAACGTCGATCTTCCCATGACCGTCGAGCTGG
TAGTCACCGAGACCGCCCCCGCGATGAAAAACGCCACCGCCACAGCCCAGACCAAAGAAGCAGTCCTAGAGACCGGTTTG
CGTCTGCAGGTGCCGCCGTACCTTGAAGCCGGAGAGAAGATCAAAGTAGACACCCGCGACGGCCGTTTCATCTCCCGCGC
GTAG

Upstream 100 bases:

>100_bases
TCACAAATCCTCCATTCTCTATAGCCGCCACCTATATGGCGCGGTTGAACTTATCACAGAATTCTGCTAAAAAGGGACAT
TTCGTAAAGGAGAATCCTGC

Downstream 100 bases:

>100_bases
TCAGGGAAAAGCAGCACCGAAAGCAGAAGCCTCAGCCTGAAGCAGAACATTGCTCTTTAGCCATAGTCCGTGGCCAGACG
TCCCCTCGCCCAGCGGGAGA

Product: elongation factor P

Products: NA

Alternate protein names: EF-P 1 [H]

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MYTTNDFKKGLVIQLDGAPCVLVDVSFQSPSARGANTMVKTKYRNLITSQVLEKTFRSGDKVDEADFERHKGQFLYADGG
RGVFMDLETYEQFEMEEDNFSAIAPFLLDGTEVQLGIFQERMVNVDLPMTVELVVTETAPAMKNATATAQTKEAVLETGL
RLQVPPYLEAGEKIKVDTRDGRFISRA

Sequences:

>Translated_187_residues
MYTTNDFKKGLVIQLDGAPCVLVDVSFQSPSARGANTMVKTKYRNLITSQVLEKTFRSGDKVDEADFERHKGQFLYADGG
RGVFMDLETYEQFEMEEDNFSAIAPFLLDGTEVQLGIFQERMVNVDLPMTVELVVTETAPAMKNATATAQTKEAVLETGL
RLQVPPYLEAGEKIKVDTRDGRFISRA
>Mature_187_residues
MYTTNDFKKGLVIQLDGAPCVLVDVSFQSPSARGANTMVKTKYRNLITSQVLEKTFRSGDKVDEADFERHKGQFLYADGG
RGVFMDLETYEQFEMEEDNFSAIAPFLLDGTEVQLGIFQERMVNVDLPMTVELVVTETAPAMKNATATAQTKEAVLETGL
RLQVPPYLEAGEKIKVDTRDGRFISRA

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family [H]

Homologues:

Organism=Escherichia coli, GI87082061, Length=189, Percent_Identity=36.5079365079365, Blast_Score=130, Evalue=5e-32,
Organism=Escherichia coli, GI1790590, Length=185, Percent_Identity=36.7567567567568, Blast_Score=116, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C [H]

EC number: NA

Molecular weight: Translated: 20873; Mature: 20873

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTTNDFKKGLVIQLDGAPCVLVDVSFQSPSARGANTMVKTKYRNLITSQVLEKTFRSGD
CCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
KVDEADFERHKGQFLYADGGRGVFMDLETYEQFEMEEDNFSAIAPFLLDGTEVQLGIFQE
CCCCHHHHHCCCCEEEECCCCEEEEECCHHHHHCCCCCCCCEECCEEECCCEEEEEEEHH
RMVNVDLPMTVELVVTETAPAMKNATATAQTKEAVLETGLRLQVPPYLEAGEKIKVDTRD
HHEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCEEEEECCC
GRFISRA
CEEEECC
>Mature Secondary Structure
MYTTNDFKKGLVIQLDGAPCVLVDVSFQSPSARGANTMVKTKYRNLITSQVLEKTFRSGD
CCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
KVDEADFERHKGQFLYADGGRGVFMDLETYEQFEMEEDNFSAIAPFLLDGTEVQLGIFQE
CCCCHHHHHCCCCEEEECCCCEEEEECCHHHHHCCCCCCCCEECCEEECCCEEEEEEEHH
RMVNVDLPMTVELVVTETAPAMKNATATAQTKEAVLETGLRLQVPPYLEAGEKIKVDTRD
HHEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCEEEEECCC
GRFISRA
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA