| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is 197116752
Identifier: 197116752
GI number: 197116752
Start: 433820
End: 434689
Strand: Reverse
Name: 197116752
Synonym: Gbem_0352
Alternate gene names: NA
Gene position: 434689-433820 (Counterclockwise)
Preceding gene: 197116754
Following gene: 197116751
Centisome position: 9.42
GC content: 65.52
Gene sequence:
>870_bases ATGAGAAGCTCGCTGGAACTTAAAACCGTACTCGATTCACTTTACGCCGTCCGCTCGCAGGAGCACCTCGCCAACGACCC GCTTTCGTTCTGCCACCGCTATGCCGACCCGCGGGACCAGGAGATCGCCGGCCTCATCGCCTCCTCGTTCGCCTACGGCA ACGTCAAGATAATCAAGAAGAACCTCGCCTGGATCTTCGACCGGATGGGGGATTCCCCGCGCCGCTTCGTCGAGCGGTTA GAGCCGGAGCAAGGCTCCCGGCTCTTCGCCGGTTTCAAGCACCGCTTCAACGACGCCCGCGACCTCTGCGCGCTCCTTTT CGCCTGCCGCACCATGCTGGAGCAGGCGGGGTCCGTGGAGGGGTGGCTGCTCCAGTTCCACGTCCAAGGGGAGGAGGACC TGACCGGGACCCTCTCCGGGTTCAGCGAGGCGGTGAAGTCCCTCGACTTCACCCCCGTCTTCGGCGCCGCCACTCCCCCC GCCGACTCCTACTTCCCCTTCTTCTTTCCCTCCCCCGCCTCGGGTAGCGCCTGCAAAAGGCTCTGCATGTACCTTCGGTG GATGGTGCGGCCGGCCGACGGCATCGACCTGGGGATCTGGAAGGGGATCAGGCCGGACCAGTTGGTCATCCCCGTGGACG CGCATATCCAGCGCATCTGCAGGCTTCTGGGCTTCACCGCCCGCAAGCAGGCGGACTGGCGCATGGCGCGCGAGATCACC GCGGCGCTGCGCGAGCTCGACCCGGCGGACCCGGTCAAATACGACTTCTCCATCTGCCACCTGGGGATCTCCGAGGGTTG CGACGGCAAGGACCACTTGAAGTGCGTAGCCTGCCCCATCGCCGGGCTCTGCCCGGTTGGATCGCCTTGA
Upstream 100 bases:
>100_bases CTCATGTGTTGCACCCCCTTTTTCCTTTAAGCTGATTTAGCACTATGATAACTTAGCAGGTTCAAAAGGATTGTCCATAA CAGCTGGGAGCGCTGCGCCA
Downstream 100 bases:
>100_bases CCGCGGTCTCCCCCGCATACCTGCATGGCTACAGCTTCTACGCGCCGGCGGGCGAGGTCTACCAAAGCCGCTTCCAGGCC CCCTTCCCGCCCCATGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MRSSLELKTVLDSLYAVRSQEHLANDPLSFCHRYADPRDQEIAGLIASSFAYGNVKIIKKNLAWIFDRMGDSPRRFVERL EPEQGSRLFAGFKHRFNDARDLCALLFACRTMLEQAGSVEGWLLQFHVQGEEDLTGTLSGFSEAVKSLDFTPVFGAATPP ADSYFPFFFPSPASGSACKRLCMYLRWMVRPADGIDLGIWKGIRPDQLVIPVDAHIQRICRLLGFTARKQADWRMAREIT AALRELDPADPVKYDFSICHLGISEGCDGKDHLKCVACPIAGLCPVGSP
Sequences:
>Translated_289_residues MRSSLELKTVLDSLYAVRSQEHLANDPLSFCHRYADPRDQEIAGLIASSFAYGNVKIIKKNLAWIFDRMGDSPRRFVERL EPEQGSRLFAGFKHRFNDARDLCALLFACRTMLEQAGSVEGWLLQFHVQGEEDLTGTLSGFSEAVKSLDFTPVFGAATPP ADSYFPFFFPSPASGSACKRLCMYLRWMVRPADGIDLGIWKGIRPDQLVIPVDAHIQRICRLLGFTARKQADWRMAREIT AALRELDPADPVKYDFSICHLGISEGCDGKDHLKCVACPIAGLCPVGSP >Mature_289_residues MRSSLELKTVLDSLYAVRSQEHLANDPLSFCHRYADPRDQEIAGLIASSFAYGNVKIIKKNLAWIFDRMGDSPRRFVERL EPEQGSRLFAGFKHRFNDARDLCALLFACRTMLEQAGSVEGWLLQFHVQGEEDLTGTLSGFSEAVKSLDFTPVFGAATPP ADSYFPFFFPSPASGSACKRLCMYLRWMVRPADGIDLGIWKGIRPDQLVIPVDAHIQRICRLLGFTARKQADWRMAREIT AALRELDPADPVKYDFSICHLGISEGCDGKDHLKCVACPIAGLCPVGSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32234; Mature: 32234
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSLELKTVLDSLYAVRSQEHLANDPLSFCHRYADPRDQEIAGLIASSFAYGNVKIIKK CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEHHH NLAWIFDRMGDSPRRFVERLEPEQGSRLFAGFKHRFNDARDLCALLFACRTMLEQAGSVE HHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC GWLLQFHVQGEEDLTGTLSGFSEAVKSLDFTPVFGAATPPADSYFPFFFPSPASGSACKR EEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH LCMYLRWMVRPADGIDLGIWKGIRPDQLVIPVDAHIQRICRLLGFTARKQADWRMAREIT HHHHHHHHHCCCCCCCCHHCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AALRELDPADPVKYDFSICHLGISEGCDGKDHLKCVACPIAGLCPVGSP HHHHHCCCCCCCEECHHEEEECCCCCCCCHHCCEEEECCCCCCCCCCCC >Mature Secondary Structure MRSSLELKTVLDSLYAVRSQEHLANDPLSFCHRYADPRDQEIAGLIASSFAYGNVKIIKK CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEHHH NLAWIFDRMGDSPRRFVERLEPEQGSRLFAGFKHRFNDARDLCALLFACRTMLEQAGSVE HHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC GWLLQFHVQGEEDLTGTLSGFSEAVKSLDFTPVFGAATPPADSYFPFFFPSPASGSACKR EEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH LCMYLRWMVRPADGIDLGIWKGIRPDQLVIPVDAHIQRICRLLGFTARKQADWRMAREIT HHHHHHHHHCCCCCCCCHHCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AALRELDPADPVKYDFSICHLGISEGCDGKDHLKCVACPIAGLCPVGSP HHHHHCCCCCCCEECHHEEEECCCCCCCCHHCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA