| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104407
Identifier: 197104407
GI number: 197104407
Start: 1033888
End: 1035696
Strand: Direct
Name: 197104407
Synonym: PHZ_c0941
Alternate gene names: NA
Gene position: 1033888-1035696 (Clockwise)
Preceding gene: 197104406
Following gene: 197104408
Centisome position: 25.87
GC content: 71.14
Gene sequence:
>1809_bases ATGGACCGCCGCGCATTCCTGACCGCCACGGCGGCCCTCGCCCTCGCGCCCGCCGCGGCCCGCGCCCAGTCGCGGACGCC CGAGGACGCCAAGCTCCGGGCGCTGTTCGACCAGATCTTCGAGGAGATCCTCGACAACTCGCCCGAAAGCGTCACCCGGC TCGGCCTGCACAAGGGCCCGCGCCTGGCCCAGAAGGCGCGGCTGGACGACCAGTCCATCGCCGGCCTCGACGCCGACAAG GCGCGCAACGCCCGCAACCTCGCCCGCCTGAAGACCATCGACCGCGGCGCGCTCAGCCCCTCGGAGGTCCCGCACTACGA CGCGGTGATGTTCACCACGCAGGCCAACGACGAGGCCAACCGGCGCTACGCCTACGGCAACGGCGGGGCGGGCCAGCCTT ATGTCCTGTCGCAGCTCACCGGCGCCTACCAGGACATTCCGGACTTCCTCGGCACCCAGCACGGCGTCGAGACCAAGGCC GACGCCGACGCCTACCTCTCGCGCCTCGAGGCCTTCGCGGCGGTGATGGACCAGGAGACCGAGCGCGCCCGCCGCGACGT GAGCCTGGGAGTCGTCCCGCCCGACTTCGTGCTGGAGCGCGCCCTGGTGCAGATGCGGGGCCTGAAGACCGATCCGACCG CCTCGCCGCTGGTCACGTCGGTGGCGACCCGCGCGGCCGAGAAGGGGATCGCCGGGGACTACGCCGGCCAGGCCGCGAAG ATTTACCAAGACAAGGTGGTCCCGGCGCTGGACCGGCAGATCGCGCTCCTCGCCTCGCTGCAGCCCAAGGCGGTGCATGA GGCGGGCTGCTGGCGCCTGCCCGACGGCGAGGCCTACTACCGCGACGCCCTGAAGAGCTCGACCACCACGACGCTGACGC CGAAGGAGATCCACGAGCTGGGCCTGGAGCAGGCCAAGGTGCTCTCGGCCCGCGCCGAGGTCATCCTGCGCGGCCAGGGT CTGACGCAGGGCTCGGTCGGCGAGCGGATCCAGCACCTCTACCGCGATCCGGCGCAGCTCTATCCCAACACCGACGCGGC GAAGGAGCAGCTGATCGCCGACTTGAACAAGCTGGTCCGCGAGATCGAGCCGCGCCTGCCCCAGGCCTTCGGCGCCCTGC CCAAGGCCCCGGTCGAGATCCGCCGCGTGCCCAAGTTCATCGAGGCCGGCGCGCCCGGCGGCTACTACAACCGGCCCGCC CTCGACGGCTCCCGGCCCGGCATCTACTGGATCAACCTGCGCGATTCCGCCGAGAACCCGCGCTGGACCCTCAAGACGCT CACCTACCACGAGGCGATCCCGGGCCATCACCTGCAGCGCTCGCTGCAGCAAGAGGCCGACCTGCCGATGCTGCGCCGCA TCGCCGGCTTCTCCCCCTATTCGGAGGGGTGGGCGCTCTATTCCGAGCAGGTGGCGCTGGAGATGGGCCTCTACGAGGAC GACCCGCTGGGCGAGCTGGGCCAGATCCAGGCCTCGCTGTTCCGCGCCGCGCGTCTGGTGGTCGACACCGGCCTTCACGC CATGCGCTGGAGCCGCGAGAAGGCCATCGAGACCATGACGTCCATCGACGGCTCGCCGACCTCCGCCGCCACGACCGAGA TCGAGCGCTACTGCGTCTGGCCCGGCCAGGCCTGCAGCTACATGGTCGGCAAGCTCACCTGGCTGCGCCTGCGCGAGAAG GCCAAGGCCGCCCTCGGCCCGCGCTTCGACCTGCGCAGCTTCCACGACGCGACTCTGCTCTCCGGGGCCATGCCCCTGAC CGTGCTGGAAGGCGTGGTCGACCGGCACATCGCCGCCCAAAAAGCCTAG
Upstream 100 bases:
>100_bases CCCGCCGGTTCCATGACGCCGTCCTGCTGTCGGGCTCCATGCCGCTGACCGCCCTCGAAAACGTCGTCGACCTCTACATC GCCCGGGAGAAGCAAGCCTG
Downstream 100 bases:
>100_bases AGGATCCCATGACCCGGATGGACCGCCGCAGCTTCCTGCTGACCACCGCCGGCGCCGCGCTGGCCGCCGCCACGCCGGCC CTGGCCCAGGGCGTGGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MDRRAFLTATAALALAPAAARAQSRTPEDAKLRALFDQIFEEILDNSPESVTRLGLHKGPRLAQKARLDDQSIAGLDADK ARNARNLARLKTIDRGALSPSEVPHYDAVMFTTQANDEANRRYAYGNGGAGQPYVLSQLTGAYQDIPDFLGTQHGVETKA DADAYLSRLEAFAAVMDQETERARRDVSLGVVPPDFVLERALVQMRGLKTDPTASPLVTSVATRAAEKGIAGDYAGQAAK IYQDKVVPALDRQIALLASLQPKAVHEAGCWRLPDGEAYYRDALKSSTTTTLTPKEIHELGLEQAKVLSARAEVILRGQG LTQGSVGERIQHLYRDPAQLYPNTDAAKEQLIADLNKLVREIEPRLPQAFGALPKAPVEIRRVPKFIEAGAPGGYYNRPA LDGSRPGIYWINLRDSAENPRWTLKTLTYHEAIPGHHLQRSLQQEADLPMLRRIAGFSPYSEGWALYSEQVALEMGLYED DPLGELGQIQASLFRAARLVVDTGLHAMRWSREKAIETMTSIDGSPTSAATTEIERYCVWPGQACSYMVGKLTWLRLREK AKAALGPRFDLRSFHDATLLSGAMPLTVLEGVVDRHIAAQKA
Sequences:
>Translated_602_residues MDRRAFLTATAALALAPAAARAQSRTPEDAKLRALFDQIFEEILDNSPESVTRLGLHKGPRLAQKARLDDQSIAGLDADK ARNARNLARLKTIDRGALSPSEVPHYDAVMFTTQANDEANRRYAYGNGGAGQPYVLSQLTGAYQDIPDFLGTQHGVETKA DADAYLSRLEAFAAVMDQETERARRDVSLGVVPPDFVLERALVQMRGLKTDPTASPLVTSVATRAAEKGIAGDYAGQAAK IYQDKVVPALDRQIALLASLQPKAVHEAGCWRLPDGEAYYRDALKSSTTTTLTPKEIHELGLEQAKVLSARAEVILRGQG LTQGSVGERIQHLYRDPAQLYPNTDAAKEQLIADLNKLVREIEPRLPQAFGALPKAPVEIRRVPKFIEAGAPGGYYNRPA LDGSRPGIYWINLRDSAENPRWTLKTLTYHEAIPGHHLQRSLQQEADLPMLRRIAGFSPYSEGWALYSEQVALEMGLYED DPLGELGQIQASLFRAARLVVDTGLHAMRWSREKAIETMTSIDGSPTSAATTEIERYCVWPGQACSYMVGKLTWLRLREK AKAALGPRFDLRSFHDATLLSGAMPLTVLEGVVDRHIAAQKA >Mature_602_residues MDRRAFLTATAALALAPAAARAQSRTPEDAKLRALFDQIFEEILDNSPESVTRLGLHKGPRLAQKARLDDQSIAGLDADK ARNARNLARLKTIDRGALSPSEVPHYDAVMFTTQANDEANRRYAYGNGGAGQPYVLSQLTGAYQDIPDFLGTQHGVETKA DADAYLSRLEAFAAVMDQETERARRDVSLGVVPPDFVLERALVQMRGLKTDPTASPLVTSVATRAAEKGIAGDYAGQAAK IYQDKVVPALDRQIALLASLQPKAVHEAGCWRLPDGEAYYRDALKSSTTTTLTPKEIHELGLEQAKVLSARAEVILRGQG LTQGSVGERIQHLYRDPAQLYPNTDAAKEQLIADLNKLVREIEPRLPQAFGALPKAPVEIRRVPKFIEAGAPGGYYNRPA LDGSRPGIYWINLRDSAENPRWTLKTLTYHEAIPGHHLQRSLQQEADLPMLRRIAGFSPYSEGWALYSEQVALEMGLYED DPLGELGQIQASLFRAARLVVDTGLHAMRWSREKAIETMTSIDGSPTSAATTEIERYCVWPGQACSYMVGKLTWLRLREK AKAALGPRFDLRSFHDATLLSGAMPLTVLEGVVDRHIAAQKA
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66123; Mature: 66123
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRRAFLTATAALALAPAAARAQSRTPEDAKLRALFDQIFEEILDNSPESVTRLGLHKGP CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC RLAQKARLDDQSIAGLDADKARNARNLARLKTIDRGALSPSEVPHYDAVMFTTQANDEAN HHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCC RRYAYGNGGAGQPYVLSQLTGAYQDIPDFLGTQHGVETKADADAYLSRLEAFAAVMDQET CEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ERARRDVSLGVVPPDFVLERALVQMRGLKTDPTASPLVTSVATRAAEKGIAGDYAGQAAK HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHH IYQDKVVPALDRQIALLASLQPKAVHEAGCWRLPDGEAYYRDALKSSTTTTLTPKEIHEL HHHHHCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHH GLEQAKVLSARAEVILRGQGLTQGSVGERIQHLYRDPAQLYPNTDAAKEQLIADLNKLVR CHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHH EIEPRLPQAFGALPKAPVEIRRVPKFIEAGAPGGYYNRPALDGSRPGIYWINLRDSAENP HHCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC RWTLKTLTYHEAIPGHHLQRSLQQEADLPMLRRIAGFSPYSEGWALYSEQVALEMGLYED CEEEEEEEHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC DPLGELGQIQASLFRAARLVVDTGLHAMRWSREKAIETMTSIDGSPTSAATTEIERYCVW CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC PGQACSYMVGKLTWLRLREKAKAALGPRFDLRSFHDATLLSGAMPLTVLEGVVDRHIAAQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC KA CC >Mature Secondary Structure MDRRAFLTATAALALAPAAARAQSRTPEDAKLRALFDQIFEEILDNSPESVTRLGLHKGP CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC RLAQKARLDDQSIAGLDADKARNARNLARLKTIDRGALSPSEVPHYDAVMFTTQANDEAN HHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCC RRYAYGNGGAGQPYVLSQLTGAYQDIPDFLGTQHGVETKADADAYLSRLEAFAAVMDQET CEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ERARRDVSLGVVPPDFVLERALVQMRGLKTDPTASPLVTSVATRAAEKGIAGDYAGQAAK HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHH IYQDKVVPALDRQIALLASLQPKAVHEAGCWRLPDGEAYYRDALKSSTTTTLTPKEIHEL HHHHHCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHH GLEQAKVLSARAEVILRGQGLTQGSVGERIQHLYRDPAQLYPNTDAAKEQLIADLNKLVR CHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHH EIEPRLPQAFGALPKAPVEIRRVPKFIEAGAPGGYYNRPALDGSRPGIYWINLRDSAENP HHCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC RWTLKTLTYHEAIPGHHLQRSLQQEADLPMLRRIAGFSPYSEGWALYSEQVALEMGLYED CEEEEEEEHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC DPLGELGQIQASLFRAARLVVDTGLHAMRWSREKAIETMTSIDGSPTSAATTEIERYCVW CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC PGQACSYMVGKLTWLRLREKAKAALGPRFDLRSFHDATLLSGAMPLTVLEGVVDRHIAAQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC KA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA