| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104408
Identifier: 197104408
GI number: 197104408
Start: 1035705
End: 1037540
Strand: Direct
Name: 197104408
Synonym: PHZ_c0942
Alternate gene names: NA
Gene position: 1035705-1037540 (Clockwise)
Preceding gene: 197104407
Following gene: 197104410
Centisome position: 25.92
GC content: 71.08
Gene sequence:
>1836_bases ATGACCCGGATGGACCGCCGCAGCTTCCTGCTGACCACCGCCGGCGCCGCGCTGGCCGCCGCCACGCCGGCCCTGGCCCA GGGCGTGGCGCAAGGTTCGGAGGACGCCCGGCTCCGCGCCATCCTCGACCGCATGTTCGAGGCGCGCGTGGACGACAGCC CCGAGTTCGCCACCCAGCTCGGCATGGACAAGGGCGCCCGCGCGCCGCTGAAGGCCCGGCTCGACGACGTGTCGCTGGCC GCCAAGGGCCGGCGCCTCGAGGAGGCCCGCGCCCACGTGCAGGCGCTCAAGGCCATCGACCGCGCCCGGCTCTCGCCCGC CGCCCAGGTGGACCTCGACGTGGTGCTCTACCGCGAGGAGCGGGCGGTCTATTCGGGCGACCGGTACAAGTTTGGCAACG TCGGCGGCAACTACAGCCCCTATGTCATCAGCCAGCGCACCGGCTCGTACCAGGACATCCCCGACTTCCTGGACTCCACC CACCGGGTCGAGACCCGCGAGGACGCCGAGGCCTACCTGTCGCGCCTGTCGGCGTTCGGCGTCCAGCTCGACCAGGACCT GGAGCGCTTCCGGCACGACGTGGGCCTGGGCGCCGTGCCGCCCGAGTTCGTGGTCCCGCTGACCATCGGCCAGCTCAAGG CCCTGCGCGGCCAGCCGGCGGCGAAGACCGTCATGGTCACCTCGATCGCGGGCAAGGCGAAGGACGCGAACCTGCCCGGC GACTGGGCCGCCCGCGCCGAGAAGATCGTCGCCGCCGAGGTGTTCCCGGCCCTGGACCGCCAGATCGCCGCCGTCGAGGC CCTGCGCGGCAAGGCGCGGCCGGACACCGGCGCCTGGGCCCTGCCCGACGGCGAGGCCTACTACGCCGACGCGGTGAAGA ACTCGACCACCACCGACTACACGCCGGAAGAGGTCCACCGGATGGGCCTGGAGCAGGTGGCCGAGATCAGCGCGCGGATC GACGAGATCCTCAAGGGGCAGGGCCTTACGCAGGGCACGGTCTCCCAGCGGCTGGCCGTCCTGAACAACGATCCGAAGCA GCTCTACCCCGACACCGACGAGGGCCGGGCGCAGATCATCGCCGATCTCAACCGGCAGATTCGCGACCTCGACCCCCTGC TGCCGAAGGTGTTCCGCACCCTGCCGAAGGCGCCGGTGGAGGTACGCCGGGTGCCGGTGTTCATCCAGGACGGGGCGTCC AACGGCTACTACCAGTCGCCGGCCCTCGACGGCTCGCGGCCCGGCGCCTTCTACATCAACCTGAAGAACACGGCGGACTG GCCGCGCTACAACCTGCCGACGCTGACCTACCACGAGGCGGCGCCCGGCCATCACCTGCAGATCGCCCTGATGCAGGAGA GCGACAAGATCCCGCTGCTGCGCCGCGCCGGCTACGGCTTCTCGGCCTACTCCGAAGGCTGGGGCCTCTACGCCGAGCAG CTCGCCGACGAGATGGGCGCCTATGCGAACGATCCGCTGGGCCGCGCCGGCTACCTGCAGTCGATGCTGTTCCGCGCCGC GCGCCTTGTCACCGACACCGGCATCCATCACAAGCGATGGACCCGCGAGCAGGCGACCCAGTACTTCGTGGACACCATCG GCAACACGCGCTCGCGCTCGCAGCGCGAGGTCGAGCGCTACTTCGTCTCGCCGGGCCAGGCCAACAGCTACAAGGTCGGC CATACCGTGTGGGTGAAGGTGCGCGAGGACGCGAAGAAGAAGCTGGGGCCGAAGTTCGACCTCGCCGCCTTCCACGACCG CGGCCTGCTGTCGGGGCCCATGCCCCTGACGGTGCTGGAGCGCCACATCGCCGCCTGGGCCGCCTCCCAGGTCTAG
Upstream 100 bases:
>100_bases GCTTCCACGACGCGACTCTGCTCTCCGGGGCCATGCCCCTGACCGTGCTGGAAGGCGTGGTCGACCGGCACATCGCCGCC CAAAAAGCCTAGAGGATCCC
Downstream 100 bases:
>100_bases GGGCGGGCACAGGATCGGGGCCCAGGACAGGGGGCTAGAACCAGCCGGCCGCCTTCAACGCCGCGGCGTGGCGGCGGCTG ATCGGGACGGCCAGCCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 611; Mature: 610
Protein sequence:
>611_residues MTRMDRRSFLLTTAGAALAAATPALAQGVAQGSEDARLRAILDRMFEARVDDSPEFATQLGMDKGARAPLKARLDDVSLA AKGRRLEEARAHVQALKAIDRARLSPAAQVDLDVVLYREERAVYSGDRYKFGNVGGNYSPYVISQRTGSYQDIPDFLDST HRVETREDAEAYLSRLSAFGVQLDQDLERFRHDVGLGAVPPEFVVPLTIGQLKALRGQPAAKTVMVTSIAGKAKDANLPG DWAARAEKIVAAEVFPALDRQIAAVEALRGKARPDTGAWALPDGEAYYADAVKNSTTTDYTPEEVHRMGLEQVAEISARI DEILKGQGLTQGTVSQRLAVLNNDPKQLYPDTDEGRAQIIADLNRQIRDLDPLLPKVFRTLPKAPVEVRRVPVFIQDGAS NGYYQSPALDGSRPGAFYINLKNTADWPRYNLPTLTYHEAAPGHHLQIALMQESDKIPLLRRAGYGFSAYSEGWGLYAEQ LADEMGAYANDPLGRAGYLQSMLFRAARLVTDTGIHHKRWTREQATQYFVDTIGNTRSRSQREVERYFVSPGQANSYKVG HTVWVKVREDAKKKLGPKFDLAAFHDRGLLSGPMPLTVLERHIAAWAASQV
Sequences:
>Translated_611_residues MTRMDRRSFLLTTAGAALAAATPALAQGVAQGSEDARLRAILDRMFEARVDDSPEFATQLGMDKGARAPLKARLDDVSLA AKGRRLEEARAHVQALKAIDRARLSPAAQVDLDVVLYREERAVYSGDRYKFGNVGGNYSPYVISQRTGSYQDIPDFLDST HRVETREDAEAYLSRLSAFGVQLDQDLERFRHDVGLGAVPPEFVVPLTIGQLKALRGQPAAKTVMVTSIAGKAKDANLPG DWAARAEKIVAAEVFPALDRQIAAVEALRGKARPDTGAWALPDGEAYYADAVKNSTTTDYTPEEVHRMGLEQVAEISARI DEILKGQGLTQGTVSQRLAVLNNDPKQLYPDTDEGRAQIIADLNRQIRDLDPLLPKVFRTLPKAPVEVRRVPVFIQDGAS NGYYQSPALDGSRPGAFYINLKNTADWPRYNLPTLTYHEAAPGHHLQIALMQESDKIPLLRRAGYGFSAYSEGWGLYAEQ LADEMGAYANDPLGRAGYLQSMLFRAARLVTDTGIHHKRWTREQATQYFVDTIGNTRSRSQREVERYFVSPGQANSYKVG HTVWVKVREDAKKKLGPKFDLAAFHDRGLLSGPMPLTVLERHIAAWAASQV >Mature_610_residues TRMDRRSFLLTTAGAALAAATPALAQGVAQGSEDARLRAILDRMFEARVDDSPEFATQLGMDKGARAPLKARLDDVSLAA KGRRLEEARAHVQALKAIDRARLSPAAQVDLDVVLYREERAVYSGDRYKFGNVGGNYSPYVISQRTGSYQDIPDFLDSTH RVETREDAEAYLSRLSAFGVQLDQDLERFRHDVGLGAVPPEFVVPLTIGQLKALRGQPAAKTVMVTSIAGKAKDANLPGD WAARAEKIVAAEVFPALDRQIAAVEALRGKARPDTGAWALPDGEAYYADAVKNSTTTDYTPEEVHRMGLEQVAEISARID EILKGQGLTQGTVSQRLAVLNNDPKQLYPDTDEGRAQIIADLNRQIRDLDPLLPKVFRTLPKAPVEVRRVPVFIQDGASN GYYQSPALDGSRPGAFYINLKNTADWPRYNLPTLTYHEAAPGHHLQIALMQESDKIPLLRRAGYGFSAYSEGWGLYAEQL ADEMGAYANDPLGRAGYLQSMLFRAARLVTDTGIHHKRWTREQATQYFVDTIGNTRSRSQREVERYFVSPGQANSYKVGH TVWVKVREDAKKKLGPKFDLAAFHDRGLLSGPMPLTVLERHIAAWAASQV
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67471; Mature: 67340
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRMDRRSFLLTTAGAALAAATPALAQGVAQGSEDARLRAILDRMFEARVDDSPEFATQL CCCCCCHHEEEEECCHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH GMDKGARAPLKARLDDVSLAAKGRRLEEARAHVQALKAIDRARLSPAAQVDLDVVLYREE CCCCCCCCCHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEEEEECC RAVYSGDRYKFGNVGGNYSPYVISQRTGSYQDIPDFLDSTHRVETREDAEAYLSRLSAFG CHHCCCCCEEECCCCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHC VQLDQDLERFRHDVGLGAVPPEFVVPLTIGQLKALRGQPAAKTVMVTSIAGKAKDANLPG CCHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCC DWAARAEKIVAAEVFPALDRQIAAVEALRGKARPDTGAWALPDGEAYYADAVKNSTTTDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHCCCCCCCC TPEEVHRMGLEQVAEISARIDEILKGQGLTQGTVSQRLAVLNNDPKQLYPDTDEGRAQII CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCHHHHH ADLNRQIRDLDPLLPKVFRTLPKAPVEVRRVPVFIQDGASNGYYQSPALDGSRPGAFYIN HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEE LKNTADWPRYNLPTLTYHEAAPGHHLQIALMQESDKIPLLRRAGYGFSAYSEGWGLYAEQ ECCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHH LADEMGAYANDPLGRAGYLQSMLFRAARLVTDTGIHHKRWTREQATQYFVDTIGNTRSRS HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHH QREVERYFVSPGQANSYKVGHTVWVKVREDAKKKLGPKFDLAAFHDRGLLSGPMPLTVLE HHHHHHHHCCCCCCCCEECCCEEEEEEHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHH RHIAAWAASQV HHHHHHHHCCC >Mature Secondary Structure TRMDRRSFLLTTAGAALAAATPALAQGVAQGSEDARLRAILDRMFEARVDDSPEFATQL CCCCCHHEEEEECCHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH GMDKGARAPLKARLDDVSLAAKGRRLEEARAHVQALKAIDRARLSPAAQVDLDVVLYREE CCCCCCCCCHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEEEEECC RAVYSGDRYKFGNVGGNYSPYVISQRTGSYQDIPDFLDSTHRVETREDAEAYLSRLSAFG CHHCCCCCEEECCCCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHC VQLDQDLERFRHDVGLGAVPPEFVVPLTIGQLKALRGQPAAKTVMVTSIAGKAKDANLPG CCHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCC DWAARAEKIVAAEVFPALDRQIAAVEALRGKARPDTGAWALPDGEAYYADAVKNSTTTDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHCCCCCCCC TPEEVHRMGLEQVAEISARIDEILKGQGLTQGTVSQRLAVLNNDPKQLYPDTDEGRAQII CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCHHHHH ADLNRQIRDLDPLLPKVFRTLPKAPVEVRRVPVFIQDGASNGYYQSPALDGSRPGAFYIN HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEE LKNTADWPRYNLPTLTYHEAAPGHHLQIALMQESDKIPLLRRAGYGFSAYSEGWGLYAEQ ECCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHH LADEMGAYANDPLGRAGYLQSMLFRAARLVTDTGIHHKRWTREQATQYFVDTIGNTRSRS HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHH QREVERYFVSPGQANSYKVGHTVWVKVREDAKKKLGPKFDLAAFHDRGLLSGPMPLTVLE HHHHHHHHCCCCCCCCEECCCEEEEEEHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHH RHIAAWAASQV HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA