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The map label for this gene is fliP [H]

Identifier: 197104388

GI number: 197104388

Start: 1016348

End: 1017085

Strand: Reverse

Name: fliP [H]

Synonym: PHZ_c0922

Alternate gene names: 197104388

Gene position: 1017085-1016348 (Counterclockwise)

Preceding gene: 197104389

Following gene: 197104382

Centisome position: 25.45

GC content: 68.43

Gene sequence:

>738_bases
ATGCTGGCCGCCGTGGCCACCTTCGCCGCCCTGTTCTTCCCCGCCGCCGCGGCGGCCCAGGCGCTGAACATCGACCTCGG
CACCGGGGCGGGCCTGACCGAACGGGTGGTCCAGCTGGTCGGCCTGCTGACGGTCCTGTCGCTGGCCCCCTCGATCGTGA
TCATGACCACCTCGTTCGTGCGGATCGTGGTCGTGCTGTCGCTGCTGCGGACCGCCCTGGGCGTTCAGCAGAGCCCGCCC
AACGCGGTGATCATCTCGCTGGCCCTGTTCCTGACCGCCATCGTCATGGGCCCCACCTTCGAGCGCTCGTACCAGGAGGG
CGTGAAGCCGCTGCTCGACCAGCAGATCGAGCTTCCGCAGGCCTTCGATGCGGCGGGCGCGCCGGTGAAGACCTTCATGC
TCTCCCAGGTGGACCCGGAGGACCTGGCCCTGTTCGTGCGCCTGTCGCGTATCCCCCGGCCGGCGACCATGGAGGACACG
CCCCTGCGGGTGGTCACGCCGGCCTTCATGATCTCGGAGCTGAAGCGCGCCTTCGAGATCGGCTTCCTGCTGTTCATCCC
GTTCCTGGTGATCGACCTGGTGGTCGCCAGCGTGCTGATGAGCATGGGCATGATGATGCTGCCGCCGGTGACGGTGAGCC
TGCCCTTCAAGCTGATCTTCTTCGTGCTGGTGGACGGCTGGCGGCTGGTGGCCGGCAGCCTGGTCGAGAGCTTCCAGCGG
GGAAGCGGCGCCGGCTAA

Upstream 100 bases:

>100_bases
GCCGCCTCCTGGGCGATGCGAAGACGGACGGCCGCTGATGCTGCGAGAGCTCTACCGCTCGACCTGCGCCCTGTCGGCCG
AGGACTGGCGCAAGGCGGCC

Downstream 100 bases:

>100_bases
CCCGCGCGGCCGGGCGGCGGCGTCGCCCTAGCTGGCGGCGGCCTTGGCCGCGGGCGCGGCGGGCCCAGGAACGGGCTTGG
GGGCGGGCTTGTCGGTGGAC

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLAAVATFAALFFPAAAAAQALNIDLGTGAGLTERVVQLVGLLTVLSLAPSIVIMTTSFVRIVVVLSLLRTALGVQQSPP
NAVIISLALFLTAIVMGPTFERSYQEGVKPLLDQQIELPQAFDAAGAPVKTFMLSQVDPEDLALFVRLSRIPRPATMEDT
PLRVVTPAFMISELKRAFEIGFLLFIPFLVIDLVVASVLMSMGMMMLPPVTVSLPFKLIFFVLVDGWRLVAGSLVESFQR
GSGAG

Sequences:

>Translated_245_residues
MLAAVATFAALFFPAAAAAQALNIDLGTGAGLTERVVQLVGLLTVLSLAPSIVIMTTSFVRIVVVLSLLRTALGVQQSPP
NAVIISLALFLTAIVMGPTFERSYQEGVKPLLDQQIELPQAFDAAGAPVKTFMLSQVDPEDLALFVRLSRIPRPATMEDT
PLRVVTPAFMISELKRAFEIGFLLFIPFLVIDLVVASVLMSMGMMMLPPVTVSLPFKLIFFVLVDGWRLVAGSLVESFQR
GSGAG
>Mature_245_residues
MLAAVATFAALFFPAAAAAQALNIDLGTGAGLTERVVQLVGLLTVLSLAPSIVIMTTSFVRIVVVLSLLRTALGVQQSPP
NAVIISLALFLTAIVMGPTFERSYQEGVKPLLDQQIELPQAFDAAGAPVKTFMLSQVDPEDLALFVRLSRIPRPATMEDT
PLRVVTPAFMISELKRAFEIGFLLFIPFLVIDLVVASVLMSMGMMMLPPVTVSLPFKLIFFVLVDGWRLVAGSLVESFQR
GSGAG

Specific function: May be a component of the flagellum. It is required for normal cell division. May be implicated in the secretion of virulence factors [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=202, Percent_Identity=49.009900990099, Blast_Score=203, Evalue=1e-53,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 26235; Mature: 26235

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCC
>Mature Secondary Structure
MLAAVATFAALFFPAAAAAQALNIDLGTGAGLTERVVQLVGLLTVLSLAPSIVIMTTSFV
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RIVVVLSLLRTALGVQQSPPNAVIISLALFLTAIVMGPTFERSYQEGVKPLLDQQIELPQ
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCH
AFDAAGAPVKTFMLSQVDPEDLALFVRLSRIPRPATMEDTPLRVVTPAFMISELKRAFEI
HHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GFLLFIPFLVIDLVVASVLMSMGMMMLPPVTVSLPFKLIFFVLVDGWRLVAGSLVESFQR
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSGAG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7601828; 11259647 [H]