Click here to switch to the map view.

The map label for this gene is fliM [H]

Identifier: 197104384

GI number: 197104384

Start: 1010910

End: 1011986

Strand: Direct

Name: fliM [H]

Synonym: PHZ_c0918

Alternate gene names: 197104384

Gene position: 1010910-1011986 (Clockwise)

Preceding gene: 197104383

Following gene: 197104385

Centisome position: 25.3

GC content: 67.41

Gene sequence:

>1077_bases
ATGAGCGAAGACACCGAAGCCACTTCCACGATGGACGACGCCGGCGCCGGCGCCTGGGCCGAGCCCAAAGGCGGCGGCGA
CGGCATGGTCGGCTCCGAGCGCATCCTGAACCAGGACGAGATCGACAGCCTGCTGGGCTTCGACCTCTCGGACGACGAGG
TTTCGGAACGCACCGGCATCCGCGCGATCATCAACTCGGCGCTGGTCTCGTACGAGCGCCTTCCGATGCTGGAGATCGTC
TTCGACCGCCTCGTGCGGTTGATGACCACCTCGCTGCGGAACTTCACCTCGGACAACGTCGAGGTGAGCCTCGACAACAT
CTCCTCGATCCGCTTCGGCGACTACCTCAACTCGATCCCGCTGCCGGCCATCCTGTCGGTGTTCCGCGCCGAGGAGCTGA
ACAACTACGGTCTGCTGACGGTCGATTCGAACCTGATCTACTCGATCGTCGACGTGCTGCTGGGCGGCCGCCGCGGCACC
GCGGCCATGCGTATCGAGGGCCGGCCCTACACCACCATCGAGCGGGTGCTGGTCCAGCGGATGGTCGAGGTCGTCCTGGC
CGACGCGCGCGAGGCGTTCGAGCCGCTGACGCCGGTCAGCTTCACCCTGGACCGCCTGGAGACCAATCCGCGCTTCGCCG
CCATCGCCCGGCCGGCCAACGCCGCCATCCTGGTGAAGCTGCGGATCGACATGGAGGACCGCGGCGGGCGCATCGAGCTG
TTGCTGCCCTACGCCACGCTCGAGCCCATCCGGAAGATGCTGCTGCAGCAGTTCATGGGCGAGAAGTTCGGCCGCGACAA
CATCTGGGAAAGCCACCTGGCCACCGAGCTGTGGACCACCAACATGGAGGTCCGCGCCGTGCTCGACGAGCAGCAGGTCA
GCCTGCAGAAGGTGCTCGACCTGAAGGTCGGCGACACCCTGATGCTGAACGCCACCCCGGACAGCCTGATCGAGCTGCGC
GCCGGGGCGATCCCGCTCACCCGCGGCCGCATGGGCCGCCGCAACCACCACATCGCCGTCAGGGTCGAGGCGCCGCTGTC
GCCGCACGCCCGCAAAGCCGTCACGAGGATCGCATGA

Upstream 100 bases:

>100_bases
GGGTCAACCTGGTGATCGCCCCGTCCAAGGCCAACGCCGTCCTCATCGAGGAGATGCTCATCAACTAGGGCCGCAAGGCC
CCGGCTGAGATCCGGATCCC

Downstream 100 bases:

>100_bases
GCGCCATCGGCCTGATCATGAACCTGGTCCTGGCGGGCCTGCTTGTCGCCGCCCTGGGCCTCGGGATGCGTCTGAACCGC
CGCCTCAAGGCGCTGCGCGA

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MSEDTEATSTMDDAGAGAWAEPKGGGDGMVGSERILNQDEIDSLLGFDLSDDEVSERTGIRAIINSALVSYERLPMLEIV
FDRLVRLMTTSLRNFTSDNVEVSLDNISSIRFGDYLNSIPLPAILSVFRAEELNNYGLLTVDSNLIYSIVDVLLGGRRGT
AAMRIEGRPYTTIERVLVQRMVEVVLADAREAFEPLTPVSFTLDRLETNPRFAAIARPANAAILVKLRIDMEDRGGRIEL
LLPYATLEPIRKMLLQQFMGEKFGRDNIWESHLATELWTTNMEVRAVLDEQQVSLQKVLDLKVGDTLMLNATPDSLIELR
AGAIPLTRGRMGRRNHHIAVRVEAPLSPHARKAVTRIA

Sequences:

>Translated_358_residues
MSEDTEATSTMDDAGAGAWAEPKGGGDGMVGSERILNQDEIDSLLGFDLSDDEVSERTGIRAIINSALVSYERLPMLEIV
FDRLVRLMTTSLRNFTSDNVEVSLDNISSIRFGDYLNSIPLPAILSVFRAEELNNYGLLTVDSNLIYSIVDVLLGGRRGT
AAMRIEGRPYTTIERVLVQRMVEVVLADAREAFEPLTPVSFTLDRLETNPRFAAIARPANAAILVKLRIDMEDRGGRIEL
LLPYATLEPIRKMLLQQFMGEKFGRDNIWESHLATELWTTNMEVRAVLDEQQVSLQKVLDLKVGDTLMLNATPDSLIELR
AGAIPLTRGRMGRRNHHIAVRVEAPLSPHARKAVTRIA
>Mature_357_residues
SEDTEATSTMDDAGAGAWAEPKGGGDGMVGSERILNQDEIDSLLGFDLSDDEVSERTGIRAIINSALVSYERLPMLEIVF
DRLVRLMTTSLRNFTSDNVEVSLDNISSIRFGDYLNSIPLPAILSVFRAEELNNYGLLTVDSNLIYSIVDVLLGGRRGTA
AMRIEGRPYTTIERVLVQRMVEVVLADAREAFEPLTPVSFTLDRLETNPRFAAIARPANAAILVKLRIDMEDRGGRIELL
LPYATLEPIRKMLLQQFMGEKFGRDNIWESHLATELWTTNMEVRAVLDEQQVSLQKVLDLKVGDTLMLNATPDSLIELRA
GAIPLTRGRMGRRNHHIAVRVEAPLSPHARKAVTRIA

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=324, Percent_Identity=25.3086419753086, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 39817; Mature: 39686

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDTEATSTMDDAGAGAWAEPKGGGDGMVGSERILNQDEIDSLLGFDLSDDEVSERTGI
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCCHHHHHHHHH
RAIINSALVSYERLPMLEIVFDRLVRLMTTSLRNFTSDNVEVSLDNISSIRFGDYLNSIP
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHCCC
LPAILSVFRAEELNNYGLLTVDSNLIYSIVDVLLGGRRGTAAMRIEGRPYTTIERVLVQR
HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHH
MVEVVLADAREAFEPLTPVSFTLDRLETNPRFAAIARPANAAILVKLRIDMEDRGGRIEL
HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEEECCCCCEEEE
LLPYATLEPIRKMLLQQFMGEKFGRDNIWESHLATELWTTNMEVRAVLDEQQVSLQKVLD
EECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHH
LKVGDTLMLNATPDSLIELRAGAIPLTRGRMGRRNHHIAVRVEAPLSPHARKAVTRIA
CCCCCEEEEECCCHHHHHHHCCCCEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHCC
>Mature Secondary Structure 
SEDTEATSTMDDAGAGAWAEPKGGGDGMVGSERILNQDEIDSLLGFDLSDDEVSERTGI
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCCHHHHHHHHH
RAIINSALVSYERLPMLEIVFDRLVRLMTTSLRNFTSDNVEVSLDNISSIRFGDYLNSIP
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHCCC
LPAILSVFRAEELNNYGLLTVDSNLIYSIVDVLLGGRRGTAAMRIEGRPYTTIERVLVQR
HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHH
MVEVVLADAREAFEPLTPVSFTLDRLETNPRFAAIARPANAAILVKLRIDMEDRGGRIEL
HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEEECCCCCEEEE
LLPYATLEPIRKMLLQQFMGEKFGRDNIWESHLATELWTTNMEVRAVLDEQQVSLQKVLD
EECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHH
LKVGDTLMLNATPDSLIELRAGAIPLTRGRMGRRNHHIAVRVEAPLSPHARKAVTRIA
CCCCCEEEEECCCHHHHHHHCCCCEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1315735 [H]