Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197104385

Identifier: 197104385

GI number: 197104385

Start: 1011983

End: 1012549

Strand: Direct

Name: 197104385

Synonym: PHZ_c0919

Alternate gene names: NA

Gene position: 1011983-1012549 (Clockwise)

Preceding gene: 197104384

Following gene: 197104386

Centisome position: 25.32

GC content: 77.6

Gene sequence:

>567_bases
ATGAGCGCCATCGGCCTGATCATGAACCTGGTCCTGGCGGGCCTGCTTGTCGCCGCCCTGGGCCTCGGGATGCGTCTGAA
CCGCCGCCTCAAGGCGCTGCGCGACAGCCACGACGGCTTCGCCACCGCCGTCGCCGAGCTGAACGCCGCCGCCGAACGGG
CCGAGCAGGGCCTGGCCGACCTGCGCGCGGCCACCGACGAGGCGACCGACGCCCTGGCCGACCGCATCGAGAAGGGCCGG
GCCCTGGCCGCCAAGCTGGAGCGGCTGATCGCCCAGGCGCCCGCCCAGGCGCCGGGGCGCGCCCGCCCGTCCGTCGAGGC
CGGGTCCGAGATCGAACCCGACCGCGACGCCGAGCGCAGGCTGGGCGCCCTGCTGGCCGCCGCCCGCGAGGCCCGCGCCA
AGCCCGAGCGGCTGGTGCGCCGCGAGCCGCTGGCCGCTCCCCTGGCGGCTCCCCTGGCCGCTCCCCTGGCCGCCCCCCGT
CCTGCGGCCAGCCCCGCGGCGAATCTCGACGACGACCTCTTCGAGGACGCGCCGCTGACCCTGACCAGCTTCGGAGCCCG
CCGGTGA

Upstream 100 bases:

>100_bases
CGCTCACCCGCGGCCGCATGGGCCGCCGCAACCACCACATCGCCGTCAGGGTCGAGGCGCCGCTGTCGCCGCACGCCCGC
AAAGCCGTCACGAGGATCGC

Downstream 100 bases:

>100_bases
AGTCCATGCCCCGCATCCTGCCGCTGGTGGGCGTCGCCGCCGGCGGGGTTCTGGCGATCAACGCCCTGTCCGGCGCCAAG
GACCTCCCGAGCCTCGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSAIGLIMNLVLAGLLVAALGLGMRLNRRLKALRDSHDGFATAVAELNAAAERAEQGLADLRAATDEATDALADRIEKGR
ALAAKLERLIAQAPAQAPGRARPSVEAGSEIEPDRDAERRLGALLAAAREARAKPERLVRREPLAAPLAAPLAAPLAAPR
PAASPAANLDDDLFEDAPLTLTSFGARR

Sequences:

>Translated_188_residues
MSAIGLIMNLVLAGLLVAALGLGMRLNRRLKALRDSHDGFATAVAELNAAAERAEQGLADLRAATDEATDALADRIEKGR
ALAAKLERLIAQAPAQAPGRARPSVEAGSEIEPDRDAERRLGALLAAAREARAKPERLVRREPLAAPLAAPLAAPLAAPR
PAASPAANLDDDLFEDAPLTLTSFGARR
>Mature_187_residues
SAIGLIMNLVLAGLLVAALGLGMRLNRRLKALRDSHDGFATAVAELNAAAERAEQGLADLRAATDEATDALADRIEKGRA
LAAKLERLIAQAPAQAPGRARPSVEAGSEIEPDRDAERRLGALLAAAREARAKPERLVRREPLAAPLAAPLAAPLAAPRP
AASPAANLDDDLFEDAPLTLTSFGARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19642; Mature: 19510

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIGLIMNLVLAGLLVAALGLGMRLNRRLKALRDSHDGFATAVAELNAAAERAEQGLAD
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LRAATDEATDALADRIEKGRALAAKLERLIAQAPAQAPGRARPSVEAGSEIEPDRDAERR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LGALLAAAREARAKPERLVRREPLAAPLAAPLAAPLAAPRPAASPAANLDDDLFEDAPLT
HHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCH
LTSFGARR
HHHCCCCC
>Mature Secondary Structure 
SAIGLIMNLVLAGLLVAALGLGMRLNRRLKALRDSHDGFATAVAELNAAAERAEQGLAD
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LRAATDEATDALADRIEKGRALAAKLERLIAQAPAQAPGRARPSVEAGSEIEPDRDAERR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LGALLAAAREARAKPERLVRREPLAAPLAAPLAAPLAAPRPAASPAANLDDDLFEDAPLT
HHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCH
LTSFGARR
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA