Definition | Phenylobacterium zucineum HLK1, complete genome. |
---|---|
Accession | NC_011144 |
Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is mrp [H]
Identifier: 197104345
GI number: 197104345
Start: 972281
End: 973381
Strand: Direct
Name: mrp [H]
Synonym: PHZ_c0879
Alternate gene names: 197104345
Gene position: 972281-973381 (Clockwise)
Preceding gene: 197104342
Following gene: 197104351
Centisome position: 24.33
GC content: 74.75
Gene sequence:
>1101_bases ATGATCCAACCGGCGGGACCCGACAGGACGGTGGTGCTCGAGGCGCTGGATCGGGTGGCCGATCCGAGGTCCGGCCAGGG GCTGGCGGCGGCCGGCCTGGTGCGCGGCCTGGTGATCCGCGGGAGCCGCGCCGCCTTCATGCTGGAGGTCCCGGCGCAGG ACATTCCGCTCTACGGGCCCGTTCGCGACGCCGCCGAGCGGGCGCTGGCCGCCGTCCCCGGCGTCGAGACCGCGCAGGTG GTGCTGACCGCCGAGGCCGACGCGCCGCAGCCAGTCGCCGTGCCCCGCCGCGCCCGCGTCTCCGAGGATCCCCAGGCCCG CCTGCAGCCCATGCCCGAGGCCCAGCGCCCGGCGCACGTGCGCAAGGTGATCGCGGTGGCCAGCGGCAAGGGCGGGGTCG GCAAGTCCACGGTTTCGGTCAACCTCGCCGCGGCCTTCGCGAAGATCGGCCTGCGGGCCGGGCTGCTCGACGCCGACGTC TACGGCCCCTCCGCCCCGCACATGCTGGGGGCCGAGGGCGAGCCCACCTTCGACGCCGAGAAGCGGCTGAACCCGCTGGA GGCCTGGGGCGTGAAGGTCATGTCCATCGGCTTCATCGTCGAGGAGGGACAGGCGGCCATCTGGCGCGGGCCGATGGCCT CGTCGGCCCTGCGCAGCCTGATGAACGCCAACTGGGGCACGGCGGCCGAGCCGCTGGACGTCCTGGTGGTCGACCTGCCG CCCGGCACCGGCGACATCCAGCTCACCCTCGTCCAGCGCCTGAAGCTGGACGGCGTGGTGGTGGTCTCGACCCCGCAGGA GATCGCCCTGATCGACGCCCGCCGCGCCGCGGCCATGTTCGAGAAGGTCGGGGCCCCGATCCTCGGCGTCGTGGAGAACA TGGCCTGGTTCGAGAGCCCGACGGGCGAGCGCGTGCCGATCTTCGGCCAGGGCGGGGCGGCCGAGGAGGCCCGGCGCCTG GGGGTGCCGCTGCTGGCGGAGATTCCCATCGAGGTGGCCCTGCGCGAGGCCTGCGACGCCGGCCGGCCGCTGGTGGCGAC CAGCCCCGACACGCCCGCCGCCTGGGCCTTCCTGCAGATGGCCGAGAAGCTCAGGCCCTAG
Upstream 100 bases:
>100_bases GGGCCTAGCGGTCCTCTGCTTAAAGCCCTGCATGGGCTTGTAAACCGGCGCTTCCAGCCGGATATGAGGCCCCTTCCCCG GCAAAGCAAGGCAAAGCGGC
Downstream 100 bases:
>100_bases AGCGAGGCCGATCAGGGCCGCCGCGGCTCGACCAGCATGTCGTCGCCGGTCAGGCTGCCCAGCGCGGGGGCCTCGGCGTA GATCGCGTCGCGCTCGTCCA
Product: GTP-binding protein, Mrp/Nbp345 family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MIQPAGPDRTVVLEALDRVADPRSGQGLAAAGLVRGLVIRGSRAAFMLEVPAQDIPLYGPVRDAAERALAAVPGVETAQV VLTAEADAPQPVAVPRRARVSEDPQARLQPMPEAQRPAHVRKVIAVASGKGGVGKSTVSVNLAAAFAKIGLRAGLLDADV YGPSAPHMLGAEGEPTFDAEKRLNPLEAWGVKVMSIGFIVEEGQAAIWRGPMASSALRSLMNANWGTAAEPLDVLVVDLP PGTGDIQLTLVQRLKLDGVVVVSTPQEIALIDARRAAAMFEKVGAPILGVVENMAWFESPTGERVPIFGQGGAAEEARRL GVPLLAEIPIEVALREACDAGRPLVATSPDTPAAWAFLQMAEKLRP
Sequences:
>Translated_366_residues MIQPAGPDRTVVLEALDRVADPRSGQGLAAAGLVRGLVIRGSRAAFMLEVPAQDIPLYGPVRDAAERALAAVPGVETAQV VLTAEADAPQPVAVPRRARVSEDPQARLQPMPEAQRPAHVRKVIAVASGKGGVGKSTVSVNLAAAFAKIGLRAGLLDADV YGPSAPHMLGAEGEPTFDAEKRLNPLEAWGVKVMSIGFIVEEGQAAIWRGPMASSALRSLMNANWGTAAEPLDVLVVDLP PGTGDIQLTLVQRLKLDGVVVVSTPQEIALIDARRAAAMFEKVGAPILGVVENMAWFESPTGERVPIFGQGGAAEEARRL GVPLLAEIPIEVALREACDAGRPLVATSPDTPAAWAFLQMAEKLRP >Mature_366_residues MIQPAGPDRTVVLEALDRVADPRSGQGLAAAGLVRGLVIRGSRAAFMLEVPAQDIPLYGPVRDAAERALAAVPGVETAQV VLTAEADAPQPVAVPRRARVSEDPQARLQPMPEAQRPAHVRKVIAVASGKGGVGKSTVSVNLAAAFAKIGLRAGLLDADV YGPSAPHMLGAEGEPTFDAEKRLNPLEAWGVKVMSIGFIVEEGQAAIWRGPMASSALRSLMNANWGTAAEPLDVLVVDLP PGTGDIQLTLVQRLKLDGVVVVSTPQEIALIDARRAAAMFEKVGAPILGVVENMAWFESPTGERVPIFGQGGAAEEARRL GVPLLAEIPIEVALREACDAGRPLVATSPDTPAAWAFLQMAEKLRP
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=265, Percent_Identity=46.0377358490566, Blast_Score=221, Evalue=6e-58, Organism=Homo sapiens, GI6912540, Length=256, Percent_Identity=37.5, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI118572611, Length=256, Percent_Identity=37.5, Blast_Score=164, Evalue=9e-41, Organism=Escherichia coli, GI87082045, Length=247, Percent_Identity=48.1781376518219, Blast_Score=223, Evalue=2e-59, Organism=Caenorhabditis elegans, GI25143050, Length=267, Percent_Identity=37.8277153558052, Blast_Score=171, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6321347, Length=256, Percent_Identity=35.9375, Blast_Score=156, Evalue=5e-39, Organism=Saccharomyces cerevisiae, GI6322188, Length=263, Percent_Identity=32.6996197718631, Blast_Score=153, Evalue=3e-38, Organism=Drosophila melanogaster, GI221511043, Length=256, Percent_Identity=37.890625, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24667611, Length=255, Percent_Identity=38.4313725490196, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI19921440, Length=291, Percent_Identity=34.020618556701, Blast_Score=138, Evalue=8e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 38345; Mature: 38345
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQPAGPDRTVVLEALDRVADPRSGQGLAAAGLVRGLVIRGSRAAFMLEVPAQDIPLYGP CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCCEEEEEECCCCCCCCCCC VRDAAERALAAVPGVETAQVVLTAEADAPQPVAVPRRARVSEDPQARLQPMPEAQRPAHV HHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHH RKVIAVASGKGGVGKSTVSVNLAAAFAKIGLRAGLLDADVYGPSAPHMLGAEGEPTFDAE HHHHHEECCCCCCCCCEEEEHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCHH KRLNPLEAWGVKVMSIGFIVEEGQAAIWRGPMASSALRSLMNANWGTAAEPLDVLVVDLP HCCCCHHHHCEEEEEEEEEEECCCEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEEECC PGTGDIQLTLVQRLKLDGVVVVSTPQEIALIDARRAAAMFEKVGAPILGVVENMAWFESP CCCCCEEEEEEHHHCCCCEEEEECCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCC TGERVPIFGQGGAAEEARRLGVPLLAEIPIEVALREACDAGRPLVATSPDTPAAWAFLQM CCCEEEEEECCCCHHHHHHCCCCEEECCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH AEKLRP HHHHCC >Mature Secondary Structure MIQPAGPDRTVVLEALDRVADPRSGQGLAAAGLVRGLVIRGSRAAFMLEVPAQDIPLYGP CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCCEEEEEECCCCCCCCCCC VRDAAERALAAVPGVETAQVVLTAEADAPQPVAVPRRARVSEDPQARLQPMPEAQRPAHV HHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHH RKVIAVASGKGGVGKSTVSVNLAAAFAKIGLRAGLLDADVYGPSAPHMLGAEGEPTFDAE HHHHHEECCCCCCCCCEEEEHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCHH KRLNPLEAWGVKVMSIGFIVEEGQAAIWRGPMASSALRSLMNANWGTAAEPLDVLVVDLP HCCCCHHHHCEEEEEEEEEEECCCEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEEECC PGTGDIQLTLVQRLKLDGVVVVSTPQEIALIDARRAAAMFEKVGAPILGVVENMAWFESP CCCCCEEEEEEHHHCCCCEEEEECCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCC TGERVPIFGQGGAAEEARRLGVPLLAEIPIEVALREACDAGRPLVATSPDTPAAWAFLQM CCCEEEEEECCCCHHHHHHCCCCEEECCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH AEKLRP HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]