| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is iolS [H]
Identifier: 197104351
GI number: 197104351
Start: 979092
End: 980090
Strand: Direct
Name: iolS [H]
Synonym: PHZ_c0885
Alternate gene names: 197104351
Gene position: 979092-980090 (Clockwise)
Preceding gene: 197104345
Following gene: 197104352
Centisome position: 24.5
GC content: 71.87
Gene sequence:
>999_bases ATGCACAGACGCAAACTCGGAACCCAGGGCCTGGAGGTCTCGGCGATCGGCTTCGGCTGCATGGGGCTGTCCGGCGTCTA CAACGCCCCAGTCGAGGCGGCGCAGGCCGAGGCGCTGGTCGCGCGCGCCGTCGAGCTGGGCGTCACCTTCTTCGATACGG CCGAGATCTACGGCATGACCGCCAACGAGGTGCTGGTGGGGGCGGCGCTGAAGCCCTTCCGGGGCCGGGTGCAGATCGCC ACCAAGTTCGGCTTCGACCTGGAGGCCGCCCGCGCGGCCGGGCGCCCGGCGGGCACGAACAGCCGCCCCGACAACATCCG CGCGGTCGCCGACGCCTCGCTGAAGCGCCTGGGCGTGGACGTCATCGACCTCTTCTACCAGCACCGGGTGGACCCGAACG TGCCGATCGAGGACGTGGCGGGCGCGGTGGGCGAGCTGGTGAAGGCCGGCAAGGTGCGCTGCTTCGGGCTGTCCGAGGCC GGACCCGAGACGATCCGCCGGGCGCACGTCGTGCATCCGGTCACGGCCCTGCAGTCGGAGTACTCGCTGTGGACGCGGGA CCCCGAGACGTCGGTCCTGCCGGTCTGTCGCGAACTCGGGATCGGCTTCGTGCCCTACAGCCCGCTGGGCCGGGGCTTCC TGGCCGGGGCGGTGAAGGGCCAGGACTCGCTGGTGGAGAACGACTTCCGCCGGTTCATGCCCAGGTTCCAGGGTCAGGCG CTGCAGAAGAACCTGCCGCTGGTGGAGACCCTGACGCGGCTGGCGGCCGAGAAGGGCCATACGCCGGCCCAGCTCGCGCT GGCCTGGCTGCTGGCGCAGGGCCCCGACATCGTGCCCATCCCCGGCACGACGAAGGTCCATCGCCTGGAGGAGAACGCCG GCGCCGCCGACGTGACGCTCGGCCCGGACGATCTGGCGGCGATCGCGGCGGCCGTGCCCGAGACCGCGGTGGAAGGCGCC CGCTACGACGAACGCGGCCTCTCGATGGTGGGTCTCTGA
Upstream 100 bases:
>100_bases TCGCGATTAAACCTTCGTAATGCTCAACCGGGCCGCGCCGAGCTTGCGGCCGGCCGCCGCGAGGCGCTTAAGATTCCCGC TCCGGAAGAAGGAGCCGCCC
Downstream 100 bases:
>100_bases GGGTAGGACCTTAGGGCGCGCTTGCGCTTCCTAGGGTTCTGGCGCCTGTATCCGCCCACGCGGGCGGACTCGGCGTGCAT GCGCATCGGGGCCCGCGCAT
Product: oxidoreductase, aldo/keto reductase family
Products: NA
Alternate protein names: AKR11A; Vegetative protein 147; VEG147 [H]
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MHRRKLGTQGLEVSAIGFGCMGLSGVYNAPVEAAQAEALVARAVELGVTFFDTAEIYGMTANEVLVGAALKPFRGRVQIA TKFGFDLEAARAAGRPAGTNSRPDNIRAVADASLKRLGVDVIDLFYQHRVDPNVPIEDVAGAVGELVKAGKVRCFGLSEA GPETIRRAHVVHPVTALQSEYSLWTRDPETSVLPVCRELGIGFVPYSPLGRGFLAGAVKGQDSLVENDFRRFMPRFQGQA LQKNLPLVETLTRLAAEKGHTPAQLALAWLLAQGPDIVPIPGTTKVHRLEENAGAADVTLGPDDLAAIAAAVPETAVEGA RYDERGLSMVGL
Sequences:
>Translated_332_residues MHRRKLGTQGLEVSAIGFGCMGLSGVYNAPVEAAQAEALVARAVELGVTFFDTAEIYGMTANEVLVGAALKPFRGRVQIA TKFGFDLEAARAAGRPAGTNSRPDNIRAVADASLKRLGVDVIDLFYQHRVDPNVPIEDVAGAVGELVKAGKVRCFGLSEA GPETIRRAHVVHPVTALQSEYSLWTRDPETSVLPVCRELGIGFVPYSPLGRGFLAGAVKGQDSLVENDFRRFMPRFQGQA LQKNLPLVETLTRLAAEKGHTPAQLALAWLLAQGPDIVPIPGTTKVHRLEENAGAADVTLGPDDLAAIAAAVPETAVEGA RYDERGLSMVGL >Mature_332_residues MHRRKLGTQGLEVSAIGFGCMGLSGVYNAPVEAAQAEALVARAVELGVTFFDTAEIYGMTANEVLVGAALKPFRGRVQIA TKFGFDLEAARAAGRPAGTNSRPDNIRAVADASLKRLGVDVIDLFYQHRVDPNVPIEDVAGAVGELVKAGKVRCFGLSEA GPETIRRAHVVHPVTALQSEYSLWTRDPETSVLPVCRELGIGFVPYSPLGRGFLAGAVKGQDSLVENDFRRFMPRFQGQA LQKNLPLVETLTRLAAEKGHTPAQLALAWLLAQGPDIVPIPGTTKVHRLEENAGAADVTLGPDDLAAIAAAVPETAVEGA RYDERGLSMVGL
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=314, Percent_Identity=28.343949044586, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI27436966, Length=316, Percent_Identity=28.1645569620253, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI27436962, Length=316, Percent_Identity=28.1645569620253, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI27436969, Length=326, Percent_Identity=27.3006134969325, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI4504825, Length=323, Percent_Identity=27.2445820433437, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI27436971, Length=334, Percent_Identity=28.1437125748503, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI223718702, Length=306, Percent_Identity=29.0849673202614, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI41152114, Length=322, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI41327764, Length=293, Percent_Identity=29.3515358361775, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI87081735, Length=325, Percent_Identity=33.5384615384615, Blast_Score=156, Evalue=2e-39, Organism=Escherichia coli, GI1789375, Length=333, Percent_Identity=30.3303303303303, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI1788070, Length=315, Percent_Identity=30.7936507936508, Blast_Score=131, Evalue=6e-32, Organism=Escherichia coli, GI1787674, Length=312, Percent_Identity=29.8076923076923, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI1789199, Length=358, Percent_Identity=28.7709497206704, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1788081, Length=273, Percent_Identity=26.007326007326, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI48994888, Length=305, Percent_Identity=28.1967213114754, Blast_Score=73, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6325384, Length=339, Percent_Identity=30.3834808259587, Blast_Score=110, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6325169, Length=332, Percent_Identity=25.3012048192771, Blast_Score=102, Evalue=8e-23, Organism=Saccharomyces cerevisiae, GI6323998, Length=324, Percent_Identity=25.6172839506173, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6319958, Length=290, Percent_Identity=24.4827586206897, Blast_Score=100, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6322615, Length=259, Percent_Identity=25.8687258687259, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6319951, Length=327, Percent_Identity=24.4648318042813, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI24646155, Length=227, Percent_Identity=28.6343612334802, Blast_Score=68, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35298; Mature: 35298
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRRKLGTQGLEVSAIGFGCMGLSGVYNAPVEAAQAEALVARAVELGVTFFDTAEIYGMT CCCCCCCCCCCEEEEEEECHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHHCCCC ANEVLVGAALKPFRGRVQIATKFGFDLEAARAAGRPAGTNSRPDNIRAVADASLKRLGVD HHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH VIDLFYQHRVDPNVPIEDVAGAVGELVKAGKVRCFGLSEAGPETIRRAHVVHPVTALQSE HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH YSLWTRDPETSVLPVCRELGIGFVPYSPLGRGFLAGAVKGQDSLVENDFRRFMPRFQGQA HHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCHH LQKNLPLVETLTRLAAEKGHTPAQLALAWLLAQGPDIVPIPGTTKVHRLEENAGAADVTL HHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCHHHEECCCCCCCEEEE GPDDLAAIAAAVPETAVEGARYDERGLSMVGL CHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MHRRKLGTQGLEVSAIGFGCMGLSGVYNAPVEAAQAEALVARAVELGVTFFDTAEIYGMT CCCCCCCCCCCEEEEEEECHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHHCCCC ANEVLVGAALKPFRGRVQIATKFGFDLEAARAAGRPAGTNSRPDNIRAVADASLKRLGVD HHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH VIDLFYQHRVDPNVPIEDVAGAVGELVKAGKVRCFGLSEAGPETIRRAHVVHPVTALQSE HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH YSLWTRDPETSVLPVCRELGIGFVPYSPLGRGFLAGAVKGQDSLVENDFRRFMPRFQGQA HHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCHH LQKNLPLVETLTRLAAEKGHTPAQLALAWLLAQGPDIVPIPGTTKVHRLEENAGAADVTL HHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCHHHEECCCCCCCEEEE GPDDLAAIAAAVPETAVEGARYDERGLSMVGL CHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377; 9298659 [H]