Click here to switch to the map view.

The map label for this gene is fliJ [H]

Identifier: 197104320

GI number: 197104320

Start: 946354

End: 946761

Strand: Direct

Name: fliJ [H]

Synonym: PHZ_c0854

Alternate gene names: 197104320

Gene position: 946354-946761 (Clockwise)

Preceding gene: 197104319

Following gene: 197104334

Centisome position: 23.68

GC content: 71.08

Gene sequence:

>408_bases
ATGAGCAACTGGTCCCAGTCGCTGATCAAGCTCGCGTCCTATGAGGTCGAGGTGCTGCAGAAGCGCCTGGCCGAGGTGGT
GGATCGCCGCATGGCCGCCCAGCAGCGCCTCGCGCGCCTGTTCGCCGAGGGCGAGGCCGAGACGGCCCATGCGGCGAGCG
ATCCCGACACCGGCCTGAGCCTTTCCGCCTACCTGGACGGGCTGCGGCTGCGGAAGGCGGCGATCCAGGCCGAGATCGAG
GTCATCCTCGCCGAGGAGGCCGGCGCCCGCGATGCGCTCGCCGAGGCCTTCGAGGCTCAGAAGAAGTACGAGCAGGTGGC
CGAGTCCGCCCGCCTGCTCGAAGTGAAGGCGCAGGGCCGCCGCGAGACCGCGGCGCTGGACGAACTCGGCCTGCGCAAGG
CCCGCTAG

Upstream 100 bases:

>100_bases
AAGCATTCCTCTCCCAGGACCCGGACGACGCCACCGGGCTGGAGGAGTCCTTCGCCGGGCTCGCCATGATCCTGGGCCAG
GCTGGTGAGGCGGCCGCGGC

Downstream 100 bases:

>100_bases
ACGATCCAGCCTTCGGGCAGCGACGAGAGCTGCACGCCCTGCAGCACCATCCGGCTGTCGCCGCCCATGTCCACGACCGC
CCCGGCGTCGCTCTGGTAGG

Product: FliJ protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSNWSQSLIKLASYEVEVLQKRLAEVVDRRMAAQQRLARLFAEGEAETAHAASDPDTGLSLSAYLDGLRLRKAAIQAEIE
VILAEEAGARDALAEAFEAQKKYEQVAESARLLEVKAQGRRETAALDELGLRKAR

Sequences:

>Translated_135_residues
MSNWSQSLIKLASYEVEVLQKRLAEVVDRRMAAQQRLARLFAEGEAETAHAASDPDTGLSLSAYLDGLRLRKAAIQAEIE
VILAEEAGARDALAEAFEAQKKYEQVAESARLLEVKAQGRRETAALDELGLRKAR
>Mature_134_residues
SNWSQSLIKLASYEVEVLQKRLAEVVDRRMAAQQRLARLFAEGEAETAHAASDPDTGLSLSAYLDGLRLRKAAIQAEIEV
ILAEEAGARDALAEAFEAQKKYEQVAESARLLEVKAQGRRETAALDELGLRKAR

Specific function: Flagellar protein that affects chemotactic events [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliJ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14882; Mature: 14751

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNWSQSLIKLASYEVEVLQKRLAEVVDRRMAAQQRLARLFAEGEAETAHAASDPDTGLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
LSAYLDGLRLRKAAIQAEIEVILAEEAGARDALAEAFEAQKKYEQVAESARLLEVKAQGR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RETAALDELGLRKAR
HHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNWSQSLIKLASYEVEVLQKRLAEVVDRRMAAQQRLARLFAEGEAETAHAASDPDTGLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
LSAYLDGLRLRKAAIQAEIEVILAEEAGARDALAEAFEAQKKYEQVAESARLLEVKAQGR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RETAALDELGLRKAR
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9286988 [H]