Definition | Phenylobacterium zucineum HLK1, complete genome. |
---|---|
Accession | NC_011144 |
Length | 3,996,255 |
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The map label for this gene is fliI [H]
Identifier: 197104319
GI number: 197104319
Start: 945008
End: 946357
Strand: Direct
Name: fliI [H]
Synonym: PHZ_c0853
Alternate gene names: 197104319
Gene position: 945008-946357 (Clockwise)
Preceding gene: 197104318
Following gene: 197104320
Centisome position: 23.65
GC content: 73.19
Gene sequence:
>1350_bases GTGCAGAGTCTTGTCGCCGCCGTGGAGCGGCTCGATCCCCTGACCGTGTCCGGGCGCGTGGCGGCCGTGAACGGCCTCCT GATCGAGGCCCGCGGGGGGCTGACCCGCCTGGCCGTCGGCGCCCGGGCCGAGATCGCCCGCTTCGGACACGATCCGCTGG CCGCCGAGGTGGTGGGCTTCCGCGACACCCGCGCGCTGCTGATGCCCTTCGGTCCGGTGGAGGGCGTCGCCCCCGGCGCC GAGATCCGCATCGAGCCCCAGGGCTCGGCCGTGCGCCCGACGCGCGCCTGGCTGGGCCGCACCGTCGACGCCTTCGGCAA TCCCATCGACGGCAAGGGGCCGCTGCCGCAGGGACTGGCCAGCTATCCGCTGCGCGCCCCCCCGCCGGCCGCGCACGCCC GCGCCCGGGTGGGCGAGCGGCTGGACCTGGGCGTGCGGGCCATGAACGTCTTCACCACCTGCTGCCGGGGCCAGCGCCTG GGCGTCTTCGCCGGCTCGGGCGTCGGCAAGTCGGTGCTGCTCTCGATGCTGGCCAAGAACGCCGACTGCGACGCCGTCGT GGTCGGCCTGATCGGCGAGCGGGGGCGCGAGGTGCGGGAGTTCATCGAGGAGACCCTGGGCGAGGAAGGTCTGAAACGCG CCATCGTCGTGGTCGCCACGTCGGACGAGCCGGCGCTCAAGCGCCGCCAGGCCGCCTACATGACCATGGCCATCGCCGAG TTCCTGCGCGACCAGGATCTGGAGGTCCTGTGCCTCATGGACAGCGTCACCCGCTTCGCCATGGCCCAGCGCGAGATCGG CCTGGCCGCCGGCGAGCCGCCGACCACCAAGGGCTACACCCCCACCGTCTTCACCGAGCTGCCCAAGCTGCTGGAGCGCG CCGGCCCCGGGCCCATCCGGCCCGACGGGACGCGGGCGGGGCCGATCACCGGCCTCTTCACCGTGCTGGTGGACGGCGAC GACCACAACGAGCCGATCGCCGATGCGGTGCGCGGCATCCTCGACGGCCACATCGTGATGGAGCGGGCCATCGCCGAGCG CGGCCGCTTCCCGGCCATCAACGTGCTGAAATCGATCAGCCGGACCATGCCGGGCTGCCAGCAGCCGCACGAGCGCGAGG TGGTGAAACAGGCCCGCCAGGCGCTGTCGGCCTACGCCAACATGGAGGAGCTGATCCGCATCGGCGCCTACCGCGCCGGG GCCGATCCGCTGATCGACCGGGCGATCGAGCTCAACCCGTCGCTCGAAGCATTCCTCTCCCAGGACCCGGACGACGCCAC CGGGCTGGAGGAGTCCTTCGCCGGGCTCGCCATGATCCTGGGCCAGGCTGGTGAGGCGGCCGCGGCATGA
Upstream 100 bases:
>100_bases CACGCCCGCCGGCCTGCAGACCACCCTGCACTAGGCAAAATCTTCACCCCCTCTTAACGGCGAAGCGCCGACTCTCGGCG CCGTTGGCTGAGGGGCGTTC
Downstream 100 bases:
>100_bases GCAACTGGTCCCAGTCGCTGATCAAGCTCGCGTCCTATGAGGTCGAGGTGCTGCAGAAGCGCCTGGCCGAGGTGGTGGAT CGCCGCATGGCCGCCCAGCA
Product: flagellum-specific ATP synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MQSLVAAVERLDPLTVSGRVAAVNGLLIEARGGLTRLAVGARAEIARFGHDPLAAEVVGFRDTRALLMPFGPVEGVAPGA EIRIEPQGSAVRPTRAWLGRTVDAFGNPIDGKGPLPQGLASYPLRAPPPAAHARARVGERLDLGVRAMNVFTTCCRGQRL GVFAGSGVGKSVLLSMLAKNADCDAVVVGLIGERGREVREFIEETLGEEGLKRAIVVVATSDEPALKRRQAAYMTMAIAE FLRDQDLEVLCLMDSVTRFAMAQREIGLAAGEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTRAGPITGLFTVLVDGD DHNEPIADAVRGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQQPHEREVVKQARQALSAYANMEELIRIGAYRAG ADPLIDRAIELNPSLEAFLSQDPDDATGLEESFAGLAMILGQAGEAAAA
Sequences:
>Translated_449_residues MQSLVAAVERLDPLTVSGRVAAVNGLLIEARGGLTRLAVGARAEIARFGHDPLAAEVVGFRDTRALLMPFGPVEGVAPGA EIRIEPQGSAVRPTRAWLGRTVDAFGNPIDGKGPLPQGLASYPLRAPPPAAHARARVGERLDLGVRAMNVFTTCCRGQRL GVFAGSGVGKSVLLSMLAKNADCDAVVVGLIGERGREVREFIEETLGEEGLKRAIVVVATSDEPALKRRQAAYMTMAIAE FLRDQDLEVLCLMDSVTRFAMAQREIGLAAGEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTRAGPITGLFTVLVDGD DHNEPIADAVRGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQQPHEREVVKQARQALSAYANMEELIRIGAYRAG ADPLIDRAIELNPSLEAFLSQDPDDATGLEESFAGLAMILGQAGEAAAA >Mature_449_residues MQSLVAAVERLDPLTVSGRVAAVNGLLIEARGGLTRLAVGARAEIARFGHDPLAAEVVGFRDTRALLMPFGPVEGVAPGA EIRIEPQGSAVRPTRAWLGRTVDAFGNPIDGKGPLPQGLASYPLRAPPPAAHARARVGERLDLGVRAMNVFTTCCRGQRL GVFAGSGVGKSVLLSMLAKNADCDAVVVGLIGERGREVREFIEETLGEEGLKRAIVVVATSDEPALKRRQAAYMTMAIAE FLRDQDLEVLCLMDSVTRFAMAQREIGLAAGEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTRAGPITGLFTVLVDGD DHNEPIADAVRGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQQPHEREVVKQARQALSAYANMEELIRIGAYRAG ADPLIDRAIELNPSLEAFLSQDPDDATGLEESFAGLAMILGQAGEAAAA
Specific function: Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum [H]
COG id: COG1157
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATPase alpha/beta chains family [H]
Homologues:
Organism=Homo sapiens, GI32189394, Length=308, Percent_Identity=30.8441558441558, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI19913426, Length=364, Percent_Identity=26.0989010989011, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI19913424, Length=287, Percent_Identity=26.4808362369338, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI50345984, Length=332, Percent_Identity=27.710843373494, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI4757810, Length=332, Percent_Identity=27.710843373494, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI19913428, Length=282, Percent_Identity=26.5957446808511, Blast_Score=96, Evalue=6e-20, Organism=Escherichia coli, GI1788251, Length=434, Percent_Identity=44.9308755760369, Blast_Score=322, Evalue=3e-89, Organism=Escherichia coli, GI1790170, Length=305, Percent_Identity=27.8688524590164, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1790172, Length=329, Percent_Identity=27.355623100304, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1790217, Length=244, Percent_Identity=31.1475409836066, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25144756, Length=368, Percent_Identity=28.5326086956522, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17565854, Length=291, Percent_Identity=29.8969072164948, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI71988063, Length=331, Percent_Identity=27.4924471299094, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71988080, Length=331, Percent_Identity=27.4924471299094, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17570191, Length=326, Percent_Identity=26.0736196319018, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71988074, Length=326, Percent_Identity=26.3803680981595, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17510931, Length=281, Percent_Identity=25.9786476868327, Blast_Score=87, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6322581, Length=423, Percent_Identity=28.3687943262411, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6319370, Length=309, Percent_Identity=28.8025889967638, Blast_Score=113, Evalue=7e-26, Organism=Saccharomyces cerevisiae, GI6319603, Length=326, Percent_Identity=27.3006134969325, Blast_Score=109, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6320016, Length=187, Percent_Identity=31.5508021390374, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI28574560, Length=312, Percent_Identity=30.1282051282051, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI24638766, Length=308, Percent_Identity=30.1948051948052, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI24583992, Length=273, Percent_Identity=28.2051282051282, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24583988, Length=273, Percent_Identity=27.8388278388278, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24583986, Length=273, Percent_Identity=27.8388278388278, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24583984, Length=273, Percent_Identity=27.8388278388278, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI20129479, Length=266, Percent_Identity=26.6917293233083, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI281361666, Length=283, Percent_Identity=27.5618374558304, Blast_Score=101, Evalue=9e-22, Organism=Drosophila melanogaster, GI24646341, Length=283, Percent_Identity=27.5618374558304, Blast_Score=101, Evalue=9e-22, Organism=Drosophila melanogaster, GI17136796, Length=283, Percent_Identity=27.5618374558304, Blast_Score=101, Evalue=9e-22, Organism=Drosophila melanogaster, GI24658560, Length=365, Percent_Identity=26.3013698630137, Blast_Score=99, Evalue=5e-21,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020003 - InterPro: IPR000194 - InterPro: IPR003593 - InterPro: IPR004100 - InterPro: IPR005714 - InterPro: IPR022426 [H]
Pfam domain/function: PF00006 ATP-synt_ab; PF02874 ATP-synt_ab_N [H]
EC number: =3.6.3.14 [H]
Molecular weight: Translated: 47696; Mature: 47696
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSLVAAVERLDPLTVSGRVAAVNGLLIEARGGLTRLAVGARAEIARFGHDPLAAEVVGF CHHHHHHHHHCCCCEECCEEEEECCEEEECCCCCEEHHHCCHHHHHHCCCCCHHHHHHCC RDTRALLMPFGPVEGVAPGAEIRIEPQGSAVRPTRAWLGRTVDAFGNPIDGKGPLPQGLA CCCCEEEECCCCCCCCCCCCEEEECCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCCHH SYPLRAPPPAAHARARVGERLDLGVRAMNVFTTCCRGQRLGVFAGSGVGKSVLLSMLAKN CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCC ADCDAVVVGLIGERGREVREFIEETLGEEGLKRAIVVVATSDEPALKRRQAAYMTMAIAE CCCCEEEEEHHHHCCHHHHHHHHHHHCHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH FLRDQDLEVLCLMDSVTRFAMAQREIGLAAGEPPTTKGYTPTVFTELPKLLERAGPGPIR HHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC PDGTRAGPITGLFTVLVDGDDHNEPIADAVRGILDGHIVMERAIAERGRFPAINVLKSIS CCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH RTMPGCQQPHEREVVKQARQALSAYANMEELIRIGAYRAGADPLIDRAIELNPSLEAFLS HHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHC QDPDDATGLEESFAGLAMILGQAGEAAAA CCCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQSLVAAVERLDPLTVSGRVAAVNGLLIEARGGLTRLAVGARAEIARFGHDPLAAEVVGF CHHHHHHHHHCCCCEECCEEEEECCEEEECCCCCEEHHHCCHHHHHHCCCCCHHHHHHCC RDTRALLMPFGPVEGVAPGAEIRIEPQGSAVRPTRAWLGRTVDAFGNPIDGKGPLPQGLA CCCCEEEECCCCCCCCCCCCEEEECCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCCHH SYPLRAPPPAAHARARVGERLDLGVRAMNVFTTCCRGQRLGVFAGSGVGKSVLLSMLAKN CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCC ADCDAVVVGLIGERGREVREFIEETLGEEGLKRAIVVVATSDEPALKRRQAAYMTMAIAE CCCCEEEEEHHHHCCHHHHHHHHHHHCHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH FLRDQDLEVLCLMDSVTRFAMAQREIGLAAGEPPTTKGYTPTVFTELPKLLERAGPGPIR HHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC PDGTRAGPITGLFTVLVDGDDHNEPIADAVRGILDGHIVMERAIAERGRFPAINVLKSIS CCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH RTMPGCQQPHEREVVKQARQALSAYANMEELIRIGAYRAGADPLIDRAIELNPSLEAFLS HHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHC QDPDDATGLEESFAGLAMILGQAGEAAAA CCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9286988 [H]