| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104264
Identifier: 197104264
GI number: 197104264
Start: 882784
End: 883476
Strand: Direct
Name: 197104264
Synonym: PHZ_c0798
Alternate gene names: NA
Gene position: 882784-883476 (Clockwise)
Preceding gene: 197104263
Following gene: 197104265
Centisome position: 22.09
GC content: 72.29
Gene sequence:
>693_bases GTGAGCCGCATCAACCACTTCCTGGACAGCCTCGACGCGCGCGACCTGGCCGCCATCGAACCGGCCCTGGAGCGCCTGTC GCTGCGCCAGAACGACGTGCTGACCGAGCCGGACCAGCCGGTGTCGCACGTCTACCTGCCGATCGACTGCATCCTCTCGG TCGTGGTGCTGATGCGCGACGGCGGCCAGGTGGAGAGCCGCACGCTGGGCCGGGAGGGCGGCTACGGCCTCCTGCACAGC CTCGGCTCGCGGATCGCCTTCGAGCGGATGATCGTGCAGGTGAGCGGCGACTGCTGGCGCGTGCCCACCGCGACGCTGCA GGCGGCGGCCGCGAACAGCCCGGCACTCACCCGGGCCATCGTCCAGCACGGGCAGGCCAGCCTGCTGCAGGCGGCGCGCT CGACGGCCTGCAACGCCCTGCACCCGGCCGAGAAGCGGCTGTGCCGGTGGCTGCTGCTGACCCAGGACCGGCTGGATTCC GACGTCCTGCCGCTGACCCAGGAGCACCTGGCGATCATGCTGGGCGTGCAGCGCACCACGGTGACGGGCGTGGCCATGCA GCTCCAGGCCCGCGGCGTCATCTCGTACTCGCGGGGGCGCATCCGCGTCCTCGACCGGGAGGGGATCGAGGCCTGCGCCT GCGAGTGCTACGGCGCCATCCAGGAGACCACCCGCCGGATCCTGCAGGGCTGA
Upstream 100 bases:
>100_bases GACTTGGATTCATGCATCTCGTGGACCTGCCCGGCACAACCGGGCGACGGGGCAGGCTGTTCCCCGGTGAACGCCGCTCG CCGCAGGGCGTTGTGGTCGG
Downstream 100 bases:
>100_bases GCCCGGCTCGGCTCTTGCGGCGCAGGCCCGTTGCGGGCCAGATCGCGCCTCTTCCGGAGGGCTGTGGTTGCGCATCTTCA AATCCCTGAGCGTCCGCGTG
Product: transcriptional regulator, Crp/Fnr family
Products: NA
Alternate protein names: CRP/FNR Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator-Related Protein; Regulatory Protein Crp; Transcriptional Regulator Protein; Transcriptional Regulator; Regulatory Subunit Of CAMP-Dependent Protein Kinases; Transcription Regulator Crp Family; Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Two-Component Response Regulator Protein; Transcriptional Regulator CAP/Crp Family; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSRINHFLDSLDARDLAAIEPALERLSLRQNDVLTEPDQPVSHVYLPIDCILSVVVLMRDGGQVESRTLGREGGYGLLHS LGSRIAFERMIVQVSGDCWRVPTATLQAAAANSPALTRAIVQHGQASLLQAARSTACNALHPAEKRLCRWLLLTQDRLDS DVLPLTQEHLAIMLGVQRTTVTGVAMQLQARGVISYSRGRIRVLDREGIEACACECYGAIQETTRRILQG
Sequences:
>Translated_230_residues MSRINHFLDSLDARDLAAIEPALERLSLRQNDVLTEPDQPVSHVYLPIDCILSVVVLMRDGGQVESRTLGREGGYGLLHS LGSRIAFERMIVQVSGDCWRVPTATLQAAAANSPALTRAIVQHGQASLLQAARSTACNALHPAEKRLCRWLLLTQDRLDS DVLPLTQEHLAIMLGVQRTTVTGVAMQLQARGVISYSRGRIRVLDREGIEACACECYGAIQETTRRILQG >Mature_229_residues SRINHFLDSLDARDLAAIEPALERLSLRQNDVLTEPDQPVSHVYLPIDCILSVVVLMRDGGQVESRTLGREGGYGLLHSL GSRIAFERMIVQVSGDCWRVPTATLQAAAANSPALTRAIVQHGQASLLQAARSTACNALHPAEKRLCRWLLLTQDRLDSD VLPLTQEHLAIMLGVQRTTVTGVAMQLQARGVISYSRGRIRVLDREGIEACACECYGAIQETTRRILQG
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25248; Mature: 25117
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRINHFLDSLDARDLAAIEPALERLSLRQNDVLTEPDQPVSHVYLPIDCILSVVVLMRD CCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEECHHHHHHHHHHHHC GGQVESRTLGREGGYGLLHSLGSRIAFERMIVQVSGDCWRVPTATLQAAAANSPALTRAI CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHCCCCHHHHHHH VQHGQASLLQAARSTACNALHPAEKRLCRWLLLTQDRLDSDVLPLTQEHLAIMLGVQRTT HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHH VTGVAMQLQARGVISYSRGRIRVLDREGIEACACECYGAIQETTRRILQG HHHHHHHHHHCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRINHFLDSLDARDLAAIEPALERLSLRQNDVLTEPDQPVSHVYLPIDCILSVVVLMRD CHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEECHHHHHHHHHHHHC GGQVESRTLGREGGYGLLHSLGSRIAFERMIVQVSGDCWRVPTATLQAAAANSPALTRAI CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHCCCCHHHHHHH VQHGQASLLQAARSTACNALHPAEKRLCRWLLLTQDRLDSDVLPLTQEHLAIMLGVQRTT HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHH VTGVAMQLQARGVISYSRGRIRVLDREGIEACACECYGAIQETTRRILQG HHHHHHHHHHCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA