| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is gltP [H]
Identifier: 197104265
GI number: 197104265
Start: 883544
End: 884806
Strand: Direct
Name: gltP [H]
Synonym: PHZ_c0799
Alternate gene names: 197104265
Gene position: 883544-884806 (Clockwise)
Preceding gene: 197104264
Following gene: 197104269
Centisome position: 22.11
GC content: 73.56
Gene sequence:
>1263_bases TTGCGCATCTTCAAATCCCTGAGCGTCCGCGTGCTGATCGGCCTCGTCCTGGGACTGGCGATCGGCGCGGCGGGCGCGGC GTACGGCGGGGCGGGCGTGGCCCGGGTCATCGAGTCGGTCGAGGCGTTCGGCGGGCTGTGGCTGAACGCCCTGCGGATGA CCGTCATCCCGCTGATCTTCGCCGTCCTGGTCACCGGCATCGCCCAGGTCTCCGACGCGGCGGCCACGGGCAAGCTCGCC GCCCGCGCCGTGGGCTGGTTCGCCGGCCTCTTGCTGCTCGCCTGCGCCTTCAGCCTGGTGTTCGTTCACGGCGTCCTGGC GCTCTGGCCGGTCAGCGCCGAGGGCGCGGCGGCCCTGCGCGCCGGCGCCCAGGCCGTGCCCGCCGAGGCGGCGACGCCGG ACTTCGTCGCCTGGGTGAAGAGCCTTGCGCCCTCCAACCCGGTGAAGGCCGCCGCCGAGGACGCCGTCCTGCCGCTGGTG GTGTTCGCCATCTTCACCGGATTTGCGCTCACCCGCCTGCCTGCCGAGCGCGGCCGCACCGTGATCGAGGTGTTCCAGAC GCTCGGCGAGGCGATGATCATCATCGTGCGCTGGGTGCTGTGGGCCGGGCCGGTCGGCGTCTTCTGCCTGGCGCTGGGCG TGGGCCTGCGGGCCGGCGTCGGCGCGGCCGGCGTGCTCGGCCACTACATCGCCGTGGCCTCCCTGGCCGGGGCGGGGATC AGCGTCGTGGCCTACATCCTGGCGGTGACCATCGGGCGGGTGCCGCTGGGCCGCTGGGCGCGGGCGACGGGGCCGGTGCT GGCCACCGCCTTCGCCACCCAGTCCTCGCTGGCCTGCCTGCCGGCGATGATCGAACGGACCCGCGACGACCTGGGCGTGC CCCAGCGGATCGCCGGCCTCGTCCTGCCGCTGGCGGTGGCGGTGTTCCGCTTCACGAGCCCGGTGGTGAACCTGGCCGTG GCGATCTTCGTGGCCCACGTCTACGGCATCCAGCCCTCGGCCCTGCAGTACGCCGGGGCGGTACTGGTGGCCCTGGCGGT CAGCGTCGGCTCGGTCGGCCTGCCGGGGCAGGTCTCGTTCATCATCAGCGTGGCGCCGATCTGCCTGGCGCTGGGCCTGC CGATCGAACTGCTGCCGATCCTGCTGGCGGTGGAGGTCGTGCCCGACATCTTCCGCACCGTCGGCAACGTCACCGGCGAC ATGGCGGTGACCGCCATCCTCGCCCGCAACGAGGAGAAGCCGCCCGAGCCCGAGGGCGCCTAG
Upstream 100 bases:
>100_bases CAGGAGACCACCCGCCGGATCCTGCAGGGCTGAGCCCGGCTCGGCTCTTGCGGCGCAGGCCCGTTGCGGGCCAGATCGCG CCTCTTCCGGAGGGCTGTGG
Downstream 100 bases:
>100_bases CCCGCGACGGCGATCCAGAGCGCCGCGGCGGCCTGGGCCGCGGCCACCGACCACAGGAGGCTGCGGAACGGCTCCTTGCG GGTCTTGTGGCGCAGGATCT
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MRIFKSLSVRVLIGLVLGLAIGAAGAAYGGAGVARVIESVEAFGGLWLNALRMTVIPLIFAVLVTGIAQVSDAAATGKLA ARAVGWFAGLLLLACAFSLVFVHGVLALWPVSAEGAAALRAGAQAVPAEAATPDFVAWVKSLAPSNPVKAAAEDAVLPLV VFAIFTGFALTRLPAERGRTVIEVFQTLGEAMIIIVRWVLWAGPVGVFCLALGVGLRAGVGAAGVLGHYIAVASLAGAGI SVVAYILAVTIGRVPLGRWARATGPVLATAFATQSSLACLPAMIERTRDDLGVPQRIAGLVLPLAVAVFRFTSPVVNLAV AIFVAHVYGIQPSALQYAGAVLVALAVSVGSVGLPGQVSFIISVAPICLALGLPIELLPILLAVEVVPDIFRTVGNVTGD MAVTAILARNEEKPPEPEGA
Sequences:
>Translated_420_residues MRIFKSLSVRVLIGLVLGLAIGAAGAAYGGAGVARVIESVEAFGGLWLNALRMTVIPLIFAVLVTGIAQVSDAAATGKLA ARAVGWFAGLLLLACAFSLVFVHGVLALWPVSAEGAAALRAGAQAVPAEAATPDFVAWVKSLAPSNPVKAAAEDAVLPLV VFAIFTGFALTRLPAERGRTVIEVFQTLGEAMIIIVRWVLWAGPVGVFCLALGVGLRAGVGAAGVLGHYIAVASLAGAGI SVVAYILAVTIGRVPLGRWARATGPVLATAFATQSSLACLPAMIERTRDDLGVPQRIAGLVLPLAVAVFRFTSPVVNLAV AIFVAHVYGIQPSALQYAGAVLVALAVSVGSVGLPGQVSFIISVAPICLALGLPIELLPILLAVEVVPDIFRTVGNVTGD MAVTAILARNEEKPPEPEGA >Mature_420_residues MRIFKSLSVRVLIGLVLGLAIGAAGAAYGGAGVARVIESVEAFGGLWLNALRMTVIPLIFAVLVTGIAQVSDAAATGKLA ARAVGWFAGLLLLACAFSLVFVHGVLALWPVSAEGAAALRAGAQAVPAEAATPDFVAWVKSLAPSNPVKAAAEDAVLPLV VFAIFTGFALTRLPAERGRTVIEVFQTLGEAMIIIVRWVLWAGPVGVFCLALGVGLRAGVGAAGVLGHYIAVASLAGAGI SVVAYILAVTIGRVPLGRWARATGPVLATAFATQSSLACLPAMIERTRDDLGVPQRIAGLVLPLAVAVFRFTSPVVNLAV AIFVAHVYGIQPSALQYAGAVLVALAVSVGSVGLPGQVSFIISVAPICLALGLPIELLPILLAVEVVPDIFRTVGNVTGD MAVTAILARNEEKPPEPEGA
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=414, Percent_Identity=31.1594202898551, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI5032093, Length=400, Percent_Identity=29.75, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI223468564, Length=271, Percent_Identity=32.1033210332103, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI223468566, Length=271, Percent_Identity=32.1033210332103, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI40254478, Length=417, Percent_Identity=24.7002398081535, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI4827012, Length=292, Percent_Identity=31.5068493150685, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI169790839, Length=277, Percent_Identity=28.158844765343, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI66773030, Length=266, Percent_Identity=27.4436090225564, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI194239697, Length=430, Percent_Identity=23.7209302325581, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI301601644, Length=136, Percent_Identity=32.3529411764706, Blast_Score=66, Evalue=7e-11, Organism=Escherichia coli, GI1790514, Length=415, Percent_Identity=26.7469879518072, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1789947, Length=421, Percent_Identity=26.1282660332542, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788024, Length=383, Percent_Identity=26.8929503916449, Blast_Score=92, Evalue=9e-20, Organism=Caenorhabditis elegans, GI71983106, Length=406, Percent_Identity=25.1231527093596, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI71983099, Length=406, Percent_Identity=25.1231527093596, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI193206505, Length=439, Percent_Identity=25.0569476082005, Blast_Score=95, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17537407, Length=420, Percent_Identity=27.1428571428571, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI71996953, Length=456, Percent_Identity=23.6842105263158, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17541374, Length=403, Percent_Identity=23.5732009925558, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24583025, Length=444, Percent_Identity=25.2252252252252, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI17137668, Length=444, Percent_Identity=25.2252252252252, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI24583023, Length=444, Percent_Identity=25.2252252252252, Blast_Score=97, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 42814; Mature: 42814
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFKSLSVRVLIGLVLGLAIGAAGAAYGGAGVARVIESVEAFGGLWLNALRMTVIPLIF CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLVTGIAQVSDAAATGKLAARAVGWFAGLLLLACAFSLVFVHGVLALWPVSAEGAAALR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AGAQAVPAEAATPDFVAWVKSLAPSNPVKAAAEDAVLPLVVFAIFTGFALTRLPAERGRT HCCHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCH VIEVFQTLGEAMIIIVRWVLWAGPVGVFCLALGVGLRAGVGAAGVLGHYIAVASLAGAGI HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHH SVVAYILAVTIGRVPLGRWARATGPVLATAFATQSSLACLPAMIERTRDDLGVPQRIAGL HHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VLPLAVAVFRFTSPVVNLAVAIFVAHVYGIQPSALQYAGAVLVALAVSVGSVGLPGQVSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH IISVAPICLALGLPIELLPILLAVEVVPDIFRTVGNVTGDMAVTAILARNEEKPPEPEGA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRIFKSLSVRVLIGLVLGLAIGAAGAAYGGAGVARVIESVEAFGGLWLNALRMTVIPLIF CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLVTGIAQVSDAAATGKLAARAVGWFAGLLLLACAFSLVFVHGVLALWPVSAEGAAALR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AGAQAVPAEAATPDFVAWVKSLAPSNPVKAAAEDAVLPLVVFAIFTGFALTRLPAERGRT HCCHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCH VIEVFQTLGEAMIIIVRWVLWAGPVGVFCLALGVGLRAGVGAAGVLGHYIAVASLAGAGI HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHH SVVAYILAVTIGRVPLGRWARATGPVLATAFATQSSLACLPAMIERTRDDLGVPQRIAGL HHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VLPLAVAVFRFTSPVVNLAVAIFVAHVYGIQPSALQYAGAVLVALAVSVGSVGLPGQVSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH IISVAPICLALGLPIELLPILLAVEVVPDIFRTVGNVTGDMAVTAILARNEEKPPEPEGA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]