| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is ilvC
Identifier: 197104243
GI number: 197104243
Start: 856887
End: 857906
Strand: Direct
Name: ilvC
Synonym: PHZ_c0777
Alternate gene names: 197104243
Gene position: 856887-857906 (Clockwise)
Preceding gene: 197104240
Following gene: 197104245
Centisome position: 21.44
GC content: 67.55
Gene sequence:
>1020_bases ATGCGCGTCTACTACGATCGCGACGCCGACCTGTCCCGGATCCTGGACAAGAAGATCGCCATCGTAGGCTATGGCTCGCA GGGCCGTGCGCATGCGCTGAACCTCGTGGACTCGGGCGTGAAGAACGTGGCCGTGGCGCTGCGCCCCGGCTCGGCCACCG CCAAGAAGGTCGAGGCCGACGGCCTGAAGGTGATGAGCGTCGCCGAAGCCTCGGCCTGGGCCGACGCGATCATGATCCTG GCGCCCGACGAACTGCAGGCGCAGATCTACCGCGACGAGATCGCCCCCAACATCAAGGACGGTGCGGCCCTGCTGTTCGC CCACGGCCTGAACGTCCACTTCGGCCTCATCGAGCCGAAGAAGACCGTCGACGTGCTGATGGTGGCGCCCAAGGGCCCCG GCCACACCGTCCGCGGCGAGTACCAGAAGGGCGGCGGCGTGCCGTGCCTGATCGCGGTCCACCACGACGCCACGGGCGGC GCCATGGACTTCGGCCTGGCCTACGCCTCGGCCATCGGCGGCGGCCGCTCGGGCGTCATCGAGACCAACTTCCGCGAGGA GTGCGAGACCGACCTGTTCGGCGAACAGGCCGTGCTCTGCGGCGGCCTGGTGGAGCTGATCCGCGCCGGCTTCGAAACCC TGGTCGAGGCGGGCTACGCCCCCGAGATGGCCTATTTCGAGTGCCTGCACGAGGTGAAGCTGATCGTCGACCTCATCTAC GAGGGCGGCATCGCCAACATGAACTACTCGATCTCCAACACGGCCGAGTACGGCGAGTACGTCACCGGCCCGCGGATCGT CACCTCCGAGACCAAGGCCGAGATGAAGCGCGTGCTGGAGGACATCCAGTCGGGCCGCTTCGTGCGCGACTTCATGCAGG AGAACGCGGTGGGCGCCCCGTCCTTCAAGGCCACCCGCCGCCGCAACGCCGAGCATCCCATCGAGGAAGTCGGCGGCCGC CTGCGCGCCATGATGCCCTGGATCACCAAGAACAAGCTGGTGGATACGGAGCGCAACTGA
Upstream 100 bases:
>100_bases CTTCGCTTGACCTAAGAGCAAAAAACCGCTTCAGAGCCCCGGCTTTGCTGCACTGCCGTTGCGCAGGCGCGGGCCAAACA ACGTATCAGGAGAAACAATC
Downstream 100 bases:
>100_bases TCGCGCAGCGCAAATTCGGAATAGGAAGGCCCGGGGGCGACCCCCGGGCCTTTTTCATGACCGGTGCTTCCCCTGAGGGG GAACTAGGACTCCTCGTCGC
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MRVYYDRDADLSRILDKKIAIVGYGSQGRAHALNLVDSGVKNVAVALRPGSATAKKVEADGLKVMSVAEASAWADAIMIL APDELQAQIYRDEIAPNIKDGAALLFAHGLNVHFGLIEPKKTVDVLMVAPKGPGHTVRGEYQKGGGVPCLIAVHHDATGG AMDFGLAYASAIGGGRSGVIETNFREECETDLFGEQAVLCGGLVELIRAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY EGGIANMNYSISNTAEYGEYVTGPRIVTSETKAEMKRVLEDIQSGRFVRDFMQENAVGAPSFKATRRRNAEHPIEEVGGR LRAMMPWITKNKLVDTERN
Sequences:
>Translated_339_residues MRVYYDRDADLSRILDKKIAIVGYGSQGRAHALNLVDSGVKNVAVALRPGSATAKKVEADGLKVMSVAEASAWADAIMIL APDELQAQIYRDEIAPNIKDGAALLFAHGLNVHFGLIEPKKTVDVLMVAPKGPGHTVRGEYQKGGGVPCLIAVHHDATGG AMDFGLAYASAIGGGRSGVIETNFREECETDLFGEQAVLCGGLVELIRAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY EGGIANMNYSISNTAEYGEYVTGPRIVTSETKAEMKRVLEDIQSGRFVRDFMQENAVGAPSFKATRRRNAEHPIEEVGGR LRAMMPWITKNKLVDTERN >Mature_339_residues MRVYYDRDADLSRILDKKIAIVGYGSQGRAHALNLVDSGVKNVAVALRPGSATAKKVEADGLKVMSVAEASAWADAIMIL APDELQAQIYRDEIAPNIKDGAALLFAHGLNVHFGLIEPKKTVDVLMVAPKGPGHTVRGEYQKGGGVPCLIAVHHDATGG AMDFGLAYASAIGGGRSGVIETNFREECETDLFGEQAVLCGGLVELIRAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY EGGIANMNYSISNTAEYGEYVTGPRIVTSETKAEMKRVLEDIQSGRFVRDFMQENAVGAPSFKATRRRNAEHPIEEVGGR LRAMMPWITKNKLVDTERN
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family
Homologues:
Organism=Escherichia coli, GI1790210, Length=295, Percent_Identity=37.9661016949153, Blast_Score=154, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6323387, Length=339, Percent_Identity=31.2684365781711, Blast_Score=121, Evalue=2e-28,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVC_PHEZH (B4RG67)
Other databases:
- EMBL: CP000747 - RefSeq: YP_002129620.1 - GeneID: 6790270 - GenomeReviews: CP000747_GR - KEGG: pzu:PHZ_c0777 - HOGENOM: HBG286525 - OMA: MAYAKGI - ProtClustDB: PRK05479 - HAMAP: MF_00435 - InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - Gene3D: G3DSA:1.10.1040.10 - PANTHER: PTHR21371 - TIGRFAMs: TIGR00465
Pfam domain/function: PF01450 IlvC; PF07991 IlvN; SSF48179 6DGDH_C_like
EC number: =1.1.1.86
Molecular weight: Translated: 36775; Mature: 36775
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: ACT_SITE 108-108
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVYYDRDADLSRILDKKIAIVGYGSQGRAHALNLVDSGVKNVAVALRPGSATAKKVEAD CEEEECCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHCCCC GLKVMSVAEASAWADAIMILAPDELQAQIYRDEIAPNIKDGAALLFAHGLNVHFGLIEPK CEEEEEHHHHHHHHCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCC KTVDVLMVAPKGPGHTVRGEYQKGGGVPCLIAVHHDATGGAMDFGLAYASAIGGGRSGVI CCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEE ETNFREECETDLFGEQAVLCGGLVELIRAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY ECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EGGIANMNYSISNTAEYGEYVTGPRIVTSETKAEMKRVLEDIQSGRFVRDFMQENAVGAP CCCCCCCCCCCCCCHHHCCCCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC SFKATRRRNAEHPIEEVGGRLRAMMPWITKNKLVDTERN CCHHHHHCCCCCCHHHHCCHHHHHHCHHHCCCCCCCCCC >Mature Secondary Structure MRVYYDRDADLSRILDKKIAIVGYGSQGRAHALNLVDSGVKNVAVALRPGSATAKKVEAD CEEEECCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHCCCC GLKVMSVAEASAWADAIMILAPDELQAQIYRDEIAPNIKDGAALLFAHGLNVHFGLIEPK CEEEEEHHHHHHHHCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCC KTVDVLMVAPKGPGHTVRGEYQKGGGVPCLIAVHHDATGGAMDFGLAYASAIGGGRSGVI CCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEE ETNFREECETDLFGEQAVLCGGLVELIRAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY ECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EGGIANMNYSISNTAEYGEYVTGPRIVTSETKAEMKRVLEDIQSGRFVRDFMQENAVGAP CCCCCCCCCCCCCCHHHCCCCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC SFKATRRRNAEHPIEEVGGRLRAMMPWITKNKLVDTERN CCHHHHHCCCCCCHHHHCCHHHHHHCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA