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The map label for this gene is yafV [C]

Identifier: 197104236

GI number: 197104236

Start: 847727

End: 848554

Strand: Direct

Name: yafV [C]

Synonym: PHZ_c0770

Alternate gene names: 197104236

Gene position: 847727-848554 (Clockwise)

Preceding gene: 197104235

Following gene: 197104237

Centisome position: 21.21

GC content: 74.88

Gene sequence:

>828_bases
ATGAAGGTCGGCCTGATCCAGACCCGCACGCCCGCCACCCACGAGGCCGCACTGGCGCACGTCCTGCCGCTGGTGCGCGA
GGCGGCCGCCGGCGGGGCCCGTCTGATCGCCACGCCCGAGGGGACGAACATCCTGCAGAGGGACCGGGCCGCGCTGCTGC
CGCAGCTCCGGCCGCTCGCCGAAGACCCGGTGGTGCTCGGCCTGCAGGCGGCCGCCCGCGAGCTTTCGGTGTGGATCCTC
GTGGGCTCGGCCCTCGTCCGGCGCGACGACGGCCCAAGGGTCGACCGGGCGGCCAACCGCCAGGTCCTGATCCGGCCCGA
CGGCAGCCTCGCCGCCACCTACGACAAGCTGCACATGTTCGACGTCGACCTGCCCACCGGCGAGACGGCGCGCGAGTCCG
AGACCTATGCGCCCGGCGACCGGGCCGTGGTCTCCGATGTGGGCGGCGTCAGGCTCGGCCATTCCATCTGCTACGACCTG
CGCTTCCCGGCGCTGTACCGGGCGCTGGCGCTGGCGGGCGCCGAGGTGCTGGCGATCCCGGCCGCCTTCACCCGGCCGAC
CGGCGAGGCGCACTGGGAAGTGCTGATGCGCGCCCGCGCCATCGAGACCGGCGCCTATGTAATCGCCCCCGCGCAGGGCG
GCTTGCACGAGGACGGCCGCGGCACCTGGGGCCGCTCGATCGTCGTGGGCCCCTGGGGCGAGGTGGTCGCCGGCCTTGAC
CATGACGCGCCCGGCGTGCTTCTCGCCGACCTCGATCCGGACGCCGTCGCCCGGGCGCGCGCCGCGATCCCTGCGCTCGC
CAATGCGCGGGCCTTCACGGGTCCCTAA

Upstream 100 bases:

>100_bases
AGCGAGAGGGCAAGCTCGACCCCCTGCTGCAGGCGGCGTGAGCCTTCCCTCCCGGCCCGGGCGGCTGGCGCGGCCTTTCC
CTCCCCATTAAGGGAGGGGG

Downstream 100 bases:

>100_bases
ATACCAGGCGCGATGATCAAGTACGCTTTGACCTGCGAGCAGGAGCACGCCTTCGAGGGCTGGTTCGGCTCCTCGGCCGA
CTACGACGACCAGCAGGCCC

Product: carbon-nitrogen hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKVGLIQTRTPATHEAALAHVLPLVREAAAGGARLIATPEGTNILQRDRAALLPQLRPLAEDPVVLGLQAAARELSVWIL
VGSALVRRDDGPRVDRAANRQVLIRPDGSLAATYDKLHMFDVDLPTGETARESETYAPGDRAVVSDVGGVRLGHSICYDL
RFPALYRALALAGAEVLAIPAAFTRPTGEAHWEVLMRARAIETGAYVIAPAQGGLHEDGRGTWGRSIVVGPWGEVVAGLD
HDAPGVLLADLDPDAVARARAAIPALANARAFTGP

Sequences:

>Translated_275_residues
MKVGLIQTRTPATHEAALAHVLPLVREAAAGGARLIATPEGTNILQRDRAALLPQLRPLAEDPVVLGLQAAARELSVWIL
VGSALVRRDDGPRVDRAANRQVLIRPDGSLAATYDKLHMFDVDLPTGETARESETYAPGDRAVVSDVGGVRLGHSICYDL
RFPALYRALALAGAEVLAIPAAFTRPTGEAHWEVLMRARAIETGAYVIAPAQGGLHEDGRGTWGRSIVVGPWGEVVAGLD
HDAPGVLLADLDPDAVARARAAIPALANARAFTGP
>Mature_275_residues
MKVGLIQTRTPATHEAALAHVLPLVREAAAGGARLIATPEGTNILQRDRAALLPQLRPLAEDPVVLGLQAAARELSVWIL
VGSALVRRDDGPRVDRAANRQVLIRPDGSLAATYDKLHMFDVDLPTGETARESETYAPGDRAVVSDVGGVRLGHSICYDL
RFPALYRALALAGAEVLAIPAAFTRPTGEAHWEVLMRARAIETGAYVIAPAQGGLHEDGRGTWGRSIVVGPWGEVVAGLD
HDAPGVLLADLDPDAVARARAAIPALANARAFTGP

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI297632348, Length=270, Percent_Identity=38.8888888888889, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI297632350, Length=270, Percent_Identity=38.8888888888889, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI5031947, Length=270, Percent_Identity=38.8888888888889, Blast_Score=171, Evalue=5e-43,
Organism=Homo sapiens, GI9910460, Length=271, Percent_Identity=32.4723247232472, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI297632346, Length=193, Percent_Identity=36.2694300518135, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI1786412, Length=214, Percent_Identity=31.7757009345794, Blast_Score=83, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17556280, Length=201, Percent_Identity=38.8059701492537, Blast_Score=133, Evalue=9e-32,
Organism=Saccharomyces cerevisiae, GI6322335, Length=302, Percent_Identity=33.4437086092715, Blast_Score=149, Evalue=4e-37,
Organism=Saccharomyces cerevisiae, GI6323383, Length=217, Percent_Identity=34.1013824884793, Blast_Score=132, Evalue=4e-32,
Organism=Drosophila melanogaster, GI17933642, Length=272, Percent_Identity=36.7647058823529, Blast_Score=155, Evalue=3e-38,
Organism=Drosophila melanogaster, GI21355835, Length=279, Percent_Identity=29.3906810035842, Blast_Score=114, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 29013; Mature: 29013

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGLIQTRTPATHEAALAHVLPLVREAAAGGARLIATPEGTNILQRDRAALLPQLRPLA
CCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC
EDPVVLGLQAAARELSVWILVGSALVRRDDGPRVDRAANRQVLIRPDGSLAATYDKLHMF
CCCEEEEHHHHHHHEEEEEEECCHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEE
DVDLPTGETARESETYAPGDRAVVSDVGGVRLGHSICYDLRFPALYRALALAGAEVLAIP
EEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHCHHHHEECCHHHHHHHHHHCCCCEEEEC
AAFTRPTGEAHWEVLMRARAIETGAYVIAPAQGGLHEDGRGTWGRSIVVGPWGEVVAGLD
HHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHCCC
HDAPGVLLADLDPDAVARARAAIPALANARAFTGP
CCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKVGLIQTRTPATHEAALAHVLPLVREAAAGGARLIATPEGTNILQRDRAALLPQLRPLA
CCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC
EDPVVLGLQAAARELSVWILVGSALVRRDDGPRVDRAANRQVLIRPDGSLAATYDKLHMF
CCCEEEEHHHHHHHEEEEEEECCHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEE
DVDLPTGETARESETYAPGDRAVVSDVGGVRLGHSICYDLRFPALYRALALAGAEVLAIP
EEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHCHHHHEECCHHHHHHHHHHCCCCEEEEC
AAFTRPTGEAHWEVLMRARAIETGAYVIAPAQGGLHEDGRGTWGRSIVVGPWGEVVAGLD
HHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHCCC
HDAPGVLLADLDPDAVARARAAIPALANARAFTGP
CCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]