| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is grxC [H]
Identifier: 197104235
GI number: 197104235
Start: 847410
End: 847667
Strand: Direct
Name: grxC [H]
Synonym: PHZ_c0769
Alternate gene names: 197104235
Gene position: 847410-847667 (Clockwise)
Preceding gene: 197104234
Following gene: 197104236
Centisome position: 21.21
GC content: 63.57
Gene sequence:
>258_bases ATGGCCAAAGTCACGATCTACACCAAGCCCTACTGCCCCTATTGCATCCGGGCGATCAGCCTGCTGGAGCAGAAGGGCGT CGATTTCACCGAGATCGAAGCCGCCTTCGATCCCGAGAAGAAGGCGGAGATGGTCCAGCGGTCCGGCCGCATGACCTTCC CGCAGATCTTCATCGGCGAGCGGCACATCGGCGGCTGCGACGACATGATCGCGCTGGAGCGAGAGGGCAAGCTCGACCCC CTGCTGCAGGCGGCGTGA
Upstream 100 bases:
>100_bases CGGGGGCGACATCCGTCAATGTCGCCGTCGTGGCGCGCGTTAAGGAAGCGACGGGACTCACCCTATGAAGCTGAAGCGAC AGCTCCTTCGTTAAGGCGCC
Downstream 100 bases:
>100_bases GCCTTCCCTCCCGGCCCGGGCGGCTGGCGCGGCCTTTCCCTCCCCATTAAGGGAGGGGGATGAAGGTCGGCCTGATCCAG ACCCGCACGCCCGCCACCCA
Product: glutaredoxin 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MAKVTIYTKPYCPYCIRAISLLEQKGVDFTEIEAAFDPEKKAEMVQRSGRMTFPQIFIGERHIGGCDDMIALEREGKLDP LLQAA
Sequences:
>Translated_85_residues MAKVTIYTKPYCPYCIRAISLLEQKGVDFTEIEAAFDPEKKAEMVQRSGRMTFPQIFIGERHIGGCDDMIALEREGKLDP LLQAA >Mature_84_residues AKVTIYTKPYCPYCIRAISLLEQKGVDFTEIEAAFDPEKKAEMVQRSGRMTFPQIFIGERHIGGCDDMIALEREGKLDPL LQAA
Specific function: Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins [H]
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1790039, Length=83, Percent_Identity=57.8313253012048, Blast_Score=102, Evalue=7e-24, Organism=Caenorhabditis elegans, GI25147337, Length=87, Percent_Identity=36.7816091954023, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR014025 - InterPro: IPR011900 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 9595; Mature: 9464
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVTIYTKPYCPYCIRAISLLEQKGVDFTEIEAAFDPEKKAEMVQRSGRMTFPQIFIGE CCEEEEEECCCCHHHHHHHHHHHHCCCCCEEHHCCCCCHHHHHHHHHCCCCCCCEEEECC RHIGGCDDMIALEREGKLDPLLQAA CCCCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure AKVTIYTKPYCPYCIRAISLLEQKGVDFTEIEAAFDPEKKAEMVQRSGRMTFPQIFIGE CEEEEEECCCCHHHHHHHHHHHHCCCCCEEHHCCCCCHHHHHHHHHCCCCCCCEEEECC RHIGGCDDMIALEREGKLDPLLQAA CCCCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]