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The map label for this gene is yagS [H]

Identifier: 197104205

GI number: 197104205

Start: 809883

End: 810833

Strand: Direct

Name: yagS [H]

Synonym: PHZ_c0739

Alternate gene names: 197104205

Gene position: 809883-810833 (Clockwise)

Preceding gene: 197104204

Following gene: 197104206

Centisome position: 20.27

GC content: 76.24

Gene sequence:

>951_bases
ATGAGGCCGTTCACCTACGAGCGGGCCGGGAGCGCGCTGGCGGCGGTCCAGGCCGCGGCGGCGACGCCCGAGGCGAAGTT
CATCGCCGGCGGCACCAACCTGCTCGACCTGATGAAGCTCGACATCGAGCGGCCGGCCCACCTGATCGACGTCGGCCGCC
TGCCGCTCGCTGCGATCGAGGAGACGCCCGAGGGGGGCCTCAGGATCGGGGCGATGGCGACGAACAGCCAGGCGGCCGCC
GACCCGCGGGTGCGCGCGCGCTATCCGGTCCTGGCCCAGGCGATCGTGGCCGGCGGCTCGCCCCAGCTGCGCAACAAGGC
CAGCGTCGGCGGCAACCTGATGCAGCGGACCCGCTGCGCCTATTTCTACGACACGGCCAAGCCCTGCAATAAGCGCGAGC
CCGGCTCCGGCTGCGGCGCGCTGGAGGGCCTGAACCGCAACGCCGCGATCCTCGGGCAGAGCCACGCGTGCATCGCCACC
CACGCCTCGGACATGGCCGTCGCCCTGGCGGCCCTGGACGCCGTCGTCGAGACCCTGGCGCCGACCGGCGAGACGCGGGC
GTTCCCGCTGCTGGAGCTGCACCGCCTGCCCGGCGAGACGCCGCAGGTGGACACCCACCTCATCCCGGGCGAGCTGATCA
CCGCGGTGGTGCTGCCGCCCCCGCCGCCGGGCGGCCAGGTCTACCGCAAGGCCCGTGACCGCGCCTCCTACGCCGGGGGC
CTGGCCAGCGTCGCGGTGGCGGGCGGCGCTGTGGCGCTGGGCATGGTGGCGCACAAGCCGTGGCGGGCCGCCGACGCCGA
GGCGGCGCTCGCGGCCGGCGCCTCGCCGCGCGAGGCCGCGGACATCGAACTGGCGCAGGCGGCCGCGGCCGGCCGCAACG
CCTTCAAGGTGGAGCTGGTCGCCCGGCTGACGGCCGCGGCGGTCGCCGAGGCGCGGGGGAGGGGCCGATGA

Upstream 100 bases:

>100_bases
TCGACCTCACCGACGCCGAGCTGCGCGAGCGGATGAGCGGCAACCTCTGCCGCTGCTCGGCCTATCCGCAGATCGTGGCC
GCCATCCGCGAGGTCGCCGG

Downstream 100 bases:

>100_bases
GCTCGGTTCGCGACTGGGAAGCGACCAATCCGATCAAGGAAGGCCGCGCCGGCGTCTTCGGCAAGGCCGTGGACCGTTAT
GAAGGGCCGCTCAAGGTCAC

Product: aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MRPFTYERAGSALAAVQAAAATPEAKFIAGGTNLLDLMKLDIERPAHLIDVGRLPLAAIEETPEGGLRIGAMATNSQAAA
DPRVRARYPVLAQAIVAGGSPQLRNKASVGGNLMQRTRCAYFYDTAKPCNKREPGSGCGALEGLNRNAAILGQSHACIAT
HASDMAVALAALDAVVETLAPTGETRAFPLLELHRLPGETPQVDTHLIPGELITAVVLPPPPPGGQVYRKARDRASYAGG
LASVAVAGGAVALGMVAHKPWRAADAEAALAAGASPREAADIELAQAAAAGRNAFKVELVARLTAAAVAEARGRGR

Sequences:

>Translated_316_residues
MRPFTYERAGSALAAVQAAAATPEAKFIAGGTNLLDLMKLDIERPAHLIDVGRLPLAAIEETPEGGLRIGAMATNSQAAA
DPRVRARYPVLAQAIVAGGSPQLRNKASVGGNLMQRTRCAYFYDTAKPCNKREPGSGCGALEGLNRNAAILGQSHACIAT
HASDMAVALAALDAVVETLAPTGETRAFPLLELHRLPGETPQVDTHLIPGELITAVVLPPPPPGGQVYRKARDRASYAGG
LASVAVAGGAVALGMVAHKPWRAADAEAALAAGASPREAADIELAQAAAAGRNAFKVELVARLTAAAVAEARGRGR
>Mature_316_residues
MRPFTYERAGSALAAVQAAAATPEAKFIAGGTNLLDLMKLDIERPAHLIDVGRLPLAAIEETPEGGLRIGAMATNSQAAA
DPRVRARYPVLAQAIVAGGSPQLRNKASVGGNLMQRTRCAYFYDTAKPCNKREPGSGCGALEGLNRNAAILGQSHACIAT
HASDMAVALAALDAVVETLAPTGETRAFPLLELHRLPGETPQVDTHLIPGELITAVVLPPPPPGGQVYRKARDRASYAGG
LASVAVAGGAVALGMVAHKPWRAADAEAALAAGASPREAADIELAQAAAAGRNAFKVELVARLTAAAVAEARGRGR

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786479, Length=319, Percent_Identity=56.4263322884012, Blast_Score=340, Evalue=8e-95,
Organism=Escherichia coli, GI1789231, Length=110, Percent_Identity=35.4545454545455, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 32475; Mature: 32475

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPFTYERAGSALAAVQAAAATPEAKFIAGGTNLLDLMKLDIERPAHLIDVGRLPLAAIE
CCCCCCHHHCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCHHEEECCCCCHHHHC
ETPEGGLRIGAMATNSQAAADPRVRARYPVLAQAIVAGGSPQLRNKASVGGNLMQRTRCA
CCCCCCEEEEEEECCCCCCCCCCHHCCCHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHH
YFYDTAKPCNKREPGSGCGALEGLNRNAAILGQSHACIATHASDMAVALAALDAVVETLA
EEECCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHC
PTGETRAFPLLELHRLPGETPQVDTHLIPGELITAVVLPPPPPGGQVYRKARDRASYAGG
CCCCCCCCCHHHHHHCCCCCCCCCCEECCCHHEEEEEECCCCCCHHHHHHHHHHHHHHCC
LASVAVAGGAVALGMVAHKPWRAADAEAALAAGASPREAADIELAQAAAAGRNAFKVELV
HHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEHHHH
ARLTAAAVAEARGRGR
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRPFTYERAGSALAAVQAAAATPEAKFIAGGTNLLDLMKLDIERPAHLIDVGRLPLAAIE
CCCCCCHHHCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCHHEEECCCCCHHHHC
ETPEGGLRIGAMATNSQAAADPRVRARYPVLAQAIVAGGSPQLRNKASVGGNLMQRTRCA
CCCCCCEEEEEEECCCCCCCCCCHHCCCHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHH
YFYDTAKPCNKREPGSGCGALEGLNRNAAILGQSHACIATHASDMAVALAALDAVVETLA
EEECCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHC
PTGETRAFPLLELHRLPGETPQVDTHLIPGELITAVVLPPPPPGGQVYRKARDRASYAGG
CCCCCCCCCHHHHHHCCCCCCCCCCEECCCHHEEEEEECCCCCCHHHHHHHHHHHHHHCC
LASVAVAGGAVALGMVAHKPWRAADAEAALAAGASPREAADIELAQAAAAGRNAFKVELV
HHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEHHHH
ARLTAAAVAEARGRGR
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]