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The map label for this gene is yagT [H]

Identifier: 197104204

GI number: 197104204

Start: 809389

End: 809886

Strand: Direct

Name: yagT [H]

Synonym: PHZ_c0738

Alternate gene names: 197104204

Gene position: 809389-809886 (Clockwise)

Preceding gene: 197104203

Following gene: 197104205

Centisome position: 20.25

GC content: 70.28

Gene sequence:

>498_bases
TTGCGCACGACCATCACCGTCAATGGAGAGGCGCGTTCGGTCGACGTCGATCCCCGCACGACCCTCCTCGACCTCCTGCG
CGAGACCCTGGGCCTGACGGGGACCAAGAAGGGCTGCGACCACGGCCAGTGCGGGGCGTGCACGGTGCTGGTGAACGGCG
TGCGCATCAACGCCTGCCTCTCCCTGGCGGTCATGCACGACGGCGACGAGGTGGTCAGCATCGAGGGCCTCGGGACGCCG
GACGCCCTGCACCCGATGCAACAGGCCTTCCTGACCCACGACGCCTTCCAGTGCGGCTACTGCACCCCCGGCCAGATCTG
TTCGGCGGTCGGCATGCTGGCCGAGGTCGAGGCCGGTTGGCCCAGCCAGGAGACCGGGGACCTGACCGCGCCCGTCGACC
TCACCGACGCCGAGCTGCGCGAGCGGATGAGCGGCAACCTCTGCCGCTGCTCGGCCTATCCGCAGATCGTGGCCGCCATC
CGCGAGGTCGCCGGATGA

Upstream 100 bases:

>100_bases
AAGGCTTGTTCCGGACGGACATCCCGGTTCAGGTAGGCGTCACGAGAACGCCCGGGTTCGCGCATCGGCGGGATCACCGG
GGAAGCGGAGGAGGGGCCAG

Downstream 100 bases:

>100_bases
GGCCGTTCACCTACGAGCGGGCCGGGAGCGCGCTGGCGGCGGTCCAGGCCGCGGCGGCGACGCCCGAGGCGAAGTTCATC
GCCGGCGGCACCAACCTGCT

Product: aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MRTTITVNGEARSVDVDPRTTLLDLLRETLGLTGTKKGCDHGQCGACTVLVNGVRINACLSLAVMHDGDEVVSIEGLGTP
DALHPMQQAFLTHDAFQCGYCTPGQICSAVGMLAEVEAGWPSQETGDLTAPVDLTDAELRERMSGNLCRCSAYPQIVAAI
REVAG

Sequences:

>Translated_165_residues
MRTTITVNGEARSVDVDPRTTLLDLLRETLGLTGTKKGCDHGQCGACTVLVNGVRINACLSLAVMHDGDEVVSIEGLGTP
DALHPMQQAFLTHDAFQCGYCTPGQICSAVGMLAEVEAGWPSQETGDLTAPVDLTDAELRERMSGNLCRCSAYPQIVAAI
REVAG
>Mature_165_residues
MRTTITVNGEARSVDVDPRTTLLDLLRETLGLTGTKKGCDHGQCGACTVLVNGVRINACLSLAVMHDGDEVVSIEGLGTP
DALHPMQQAFLTHDAFQCGYCTPGQICSAVGMLAEVEAGWPSQETGDLTAPVDLTDAELRERMSGNLCRCSAYPQIVAAI
REVAG

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=161, Percent_Identity=36.0248447204969, Blast_Score=71, Evalue=4e-13,
Organism=Escherichia coli, GI1786480, Length=165, Percent_Identity=64.8484848484848, Blast_Score=228, Evalue=2e-61,
Organism=Escherichia coli, GI1789232, Length=155, Percent_Identity=41.2903225806452, Blast_Score=110, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17540638, Length=169, Percent_Identity=33.7278106508876, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17539860, Length=165, Percent_Identity=33.9393939393939, Blast_Score=94, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI32566215, Length=165, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=9e-20,
Organism=Drosophila melanogaster, GI17737937, Length=169, Percent_Identity=37.8698224852071, Blast_Score=94, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24647201, Length=172, Percent_Identity=32.5581395348837, Blast_Score=90, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24647199, Length=172, Percent_Identity=31.9767441860465, Blast_Score=87, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24647197, Length=178, Percent_Identity=33.1460674157303, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24647195, Length=178, Percent_Identity=33.1460674157303, Blast_Score=87, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24647193, Length=178, Percent_Identity=31.4606741573034, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 17434; Mature: 17434

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTTITVNGEARSVDVDPRTTLLDLLRETLGLTGTKKGCDHGQCGACTVLVNGVRINACL
CCEEEEECCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEHEE
SLAVMHDGDEVVSIEGLGTPDALHPMQQAFLTHDAFQCGYCTPGQICSAVGMLAEVEAGW
EEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
PSQETGDLTAPVDLTDAELRERMSGNLCRCSAYPQIVAAIREVAG
CCCCCCCEECCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure
MRTTITVNGEARSVDVDPRTTLLDLLRETLGLTGTKKGCDHGQCGACTVLVNGVRINACL
CCEEEEECCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEHEE
SLAVMHDGDEVVSIEGLGTPDALHPMQQAFLTHDAFQCGYCTPGQICSAVGMLAEVEAGW
EEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
PSQETGDLTAPVDLTDAELRERMSGNLCRCSAYPQIVAAIREVAG
CCCCCCCEECCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]