| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104179
Identifier: 197104179
GI number: 197104179
Start: 784592
End: 786418
Strand: Direct
Name: 197104179
Synonym: PHZ_c0713
Alternate gene names: NA
Gene position: 784592-786418 (Clockwise)
Preceding gene: 197104177
Following gene: 197104185
Centisome position: 19.63
GC content: 71.15
Gene sequence:
>1827_bases ATGCACGCCTCCCGTCGCCAACTGCTGCTGTCGGCGCTCGCCGCCGGCGTCTCCACCACCCTGCCGCTGCGGGCGCTCGC CGCGCCGGGCGCGGTCGCCGATCCGCGCCTCTCGGCCCTGCTCGACGCCTTCGTGGACGAGATCCTGCGGGCCAGCCCGC TGACCGCCACGAGCCTGGGTCTGGACAAGGGCGCGTACGCCGCCCTGAAGCGCCGGCTCGACGACCGCTCGGCCGAGGGG CGCCGCCGCGAGATCGCCGCCTACGCCGACCGCGCGAGGCGCCTGCGAGCCATCCCCCGCGGCGGGCTGAGCGGCCGCGA CCTCACCGTCTACGACACCGTGCTCTACGCCATGGACGTGGGCGCCGAGGGCGGTCGGTTCGCCTACGGCCAGGACTACG CCAACCCCTATGTCGTCAGCCAGCAGGACGGCACGGTCGCCATCACGCCTGAGTTCCTGAACTCGCAGCACCTGATCGAG ACGCGCGAGGACGCCGAGGCCTATCTGGCGCGCCTGGAGCAGATGGGCGCCGCCATCGACGCCGAGACCGCGCGCATGGC CGATGCGGCGGGGCAGGGCGTGATCCCGCCAGCGTTCATCCTGGCCACCACGCTGAAGCAGCTCACCGACGCACGCGCGC CCGAGCCGGGCTCCGCGCGGATGGTCACTTCCCTGGCCGAGCGAGCCAAGGCGAAGGGCCTGGAAGGCGACTGGCGCGGC CGCGCCACGGCCATCGTCGCCCAGAAGGTCTATCCGGCTATCGACCGCCAGATCGCCGGCGTGAAGGCCCTGCAGCCGCG GGCGACGAACGACGCCGGGGTGTGGAAGTTCAAGGACGGCGCCGACTACTACCGCTGGGCGCTGAAGTACAACACGACCA CCGATCTCACCCCCGCCGAGATCCACGAGATCGGCCTGCGCCAGGGCCGCGAAATCGACGCCCTGATGGACGGCATCCTG AAGTCGCAGGGGCTGAGCCAGGGCACGGTCGGGGAGCGGATGAGCGCCCTGACTAAGGACCCGCGGTTCCTCTACCCCAA TACCGAGGCGGGCAAGCGGGAGGTGGTGGAATACATCCAGGCCAAGGTGGACGAGATCCGGCCGTTCATCCCGCAGTTCT CGAAGCTGGGCCTGAAGGCGCCCGTCGAGGTGCGGCCGGTGCCGAAGGAGATCGAGGCCGGCGCGGCCCTGGGCTACATG AACTTCGCCGCCCTCGATGGCTCCCGGCCGGCGATCTACTACGTGAACCTGTCGGACACCTCGAACTGGCCGCGCTACAC TCTGGCCAGCCTGACCATGCACGAGGCGCTACCCGGCCACGCCTGGCAGGGCGCCTACCTCGCCGAGCGCAACAGCGAGA TCCACACGATCGCCTCGCTGACCGGCTTCGGGGCGTTCACCGAGGGCTGGGCGCTCTACGCCGAACAACTCGCCGACGAG GTGGGGCTCTACAAGGACGACCCGTTCGGCCGTCTGGGCTACCTGCAGGCGATCCGCTTCCGCTGCGCGCGGCTCGTCGT CGACACCGGCCTGCACGACAAGCGCTGGACCCGCGAGCAGGCGATCCAGGAACTCGCCGGCGCCACCGGCCGCTCGGTCG GGGCGGCCACCAGCGAGGTGGACCGCTATTGCGCCAGCCCGGGCCAGGCCTGCGCCTACAAGGTCGGCCACAACGAGATC GTCCGCCTGCGCGAGAAGGCCAAGGCCGCGCTCGGCCCGAAGTTCGACCTGCGCGATTTCAACGACGCGGTGGTGTCGAC GGGCGGCACGCCGCTCGCCGTTCTGGAGACGGTGGTCGACCGCTACGTGGCCGAGGCGAAGGCCTGA
Upstream 100 bases:
>100_bases GCCCCGACCCAGGTCTAGCCGGGACGCCACGGCCAAGGCGTTGCGCCCGGCCGCGGACCGGTTAGGGTCGCCCCCAAACC GTCAGTCCCGGGGTTCCAGA
Downstream 100 bases:
>100_bases TCCGCAGGGGCGAGGGCGGCGGCTACAGCATCTCCAGCAGGGTCCGGACGCAGGCGGCGGAGTTCTCCGCCGCCATCGCC TCCATCTCGGTGAAGGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 608; Mature: 608
Protein sequence:
>608_residues MHASRRQLLLSALAAGVSTTLPLRALAAPGAVADPRLSALLDAFVDEILRASPLTATSLGLDKGAYAALKRRLDDRSAEG RRREIAAYADRARRLRAIPRGGLSGRDLTVYDTVLYAMDVGAEGGRFAYGQDYANPYVVSQQDGTVAITPEFLNSQHLIE TREDAEAYLARLEQMGAAIDAETARMADAAGQGVIPPAFILATTLKQLTDARAPEPGSARMVTSLAERAKAKGLEGDWRG RATAIVAQKVYPAIDRQIAGVKALQPRATNDAGVWKFKDGADYYRWALKYNTTTDLTPAEIHEIGLRQGREIDALMDGIL KSQGLSQGTVGERMSALTKDPRFLYPNTEAGKREVVEYIQAKVDEIRPFIPQFSKLGLKAPVEVRPVPKEIEAGAALGYM NFAALDGSRPAIYYVNLSDTSNWPRYTLASLTMHEALPGHAWQGAYLAERNSEIHTIASLTGFGAFTEGWALYAEQLADE VGLYKDDPFGRLGYLQAIRFRCARLVVDTGLHDKRWTREQAIQELAGATGRSVGAATSEVDRYCASPGQACAYKVGHNEI VRLREKAKAALGPKFDLRDFNDAVVSTGGTPLAVLETVVDRYVAEAKA
Sequences:
>Translated_608_residues MHASRRQLLLSALAAGVSTTLPLRALAAPGAVADPRLSALLDAFVDEILRASPLTATSLGLDKGAYAALKRRLDDRSAEG RRREIAAYADRARRLRAIPRGGLSGRDLTVYDTVLYAMDVGAEGGRFAYGQDYANPYVVSQQDGTVAITPEFLNSQHLIE TREDAEAYLARLEQMGAAIDAETARMADAAGQGVIPPAFILATTLKQLTDARAPEPGSARMVTSLAERAKAKGLEGDWRG RATAIVAQKVYPAIDRQIAGVKALQPRATNDAGVWKFKDGADYYRWALKYNTTTDLTPAEIHEIGLRQGREIDALMDGIL KSQGLSQGTVGERMSALTKDPRFLYPNTEAGKREVVEYIQAKVDEIRPFIPQFSKLGLKAPVEVRPVPKEIEAGAALGYM NFAALDGSRPAIYYVNLSDTSNWPRYTLASLTMHEALPGHAWQGAYLAERNSEIHTIASLTGFGAFTEGWALYAEQLADE VGLYKDDPFGRLGYLQAIRFRCARLVVDTGLHDKRWTREQAIQELAGATGRSVGAATSEVDRYCASPGQACAYKVGHNEI VRLREKAKAALGPKFDLRDFNDAVVSTGGTPLAVLETVVDRYVAEAKA >Mature_608_residues MHASRRQLLLSALAAGVSTTLPLRALAAPGAVADPRLSALLDAFVDEILRASPLTATSLGLDKGAYAALKRRLDDRSAEG RRREIAAYADRARRLRAIPRGGLSGRDLTVYDTVLYAMDVGAEGGRFAYGQDYANPYVVSQQDGTVAITPEFLNSQHLIE TREDAEAYLARLEQMGAAIDAETARMADAAGQGVIPPAFILATTLKQLTDARAPEPGSARMVTSLAERAKAKGLEGDWRG RATAIVAQKVYPAIDRQIAGVKALQPRATNDAGVWKFKDGADYYRWALKYNTTTDLTPAEIHEIGLRQGREIDALMDGIL KSQGLSQGTVGERMSALTKDPRFLYPNTEAGKREVVEYIQAKVDEIRPFIPQFSKLGLKAPVEVRPVPKEIEAGAALGYM NFAALDGSRPAIYYVNLSDTSNWPRYTLASLTMHEALPGHAWQGAYLAERNSEIHTIASLTGFGAFTEGWALYAEQLADE VGLYKDDPFGRLGYLQAIRFRCARLVVDTGLHDKRWTREQAIQELAGATGRSVGAATSEVDRYCASPGQACAYKVGHNEI VRLREKAKAALGPKFDLRDFNDAVVSTGGTPLAVLETVVDRYVAEAKA
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66049; Mature: 66049
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHASRRQLLLSALAAGVSTTLPLRALAAPGAVADPRLSALLDAFVDEILRASPLTATSLG CCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCC LDKGAYAALKRRLDDRSAEGRRREIAAYADRARRLRAIPRGGLSGRDLTVYDTVLYAMDV CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHC GAEGGRFAYGQDYANPYVVSQQDGTVAITPEFLNSQHLIETREDAEAYLARLEQMGAAID CCCCCCEECCCCCCCCEEEECCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHC AETARMADAAGQGVIPPAFILATTLKQLTDARAPEPGSARMVTSLAERAKAKGLEGDWRG HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC RATAIVAQKVYPAIDRQIAGVKALQPRATNDAGVWKFKDGADYYRWALKYNTTTDLTPAE CHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCHHH IHEIGLRQGREIDALMDGILKSQGLSQGTVGERMSALTKDPRFLYPNTEAGKREVVEYIQ HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEECCCCCCHHHHHHHHHH AKVDEIRPFIPQFSKLGLKAPVEVRPVPKEIEAGAALGYMNFAALDGSRPAIYYVNLSDT HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHCCHHHEEECCCCCEEEEEEECCC SNWPRYTLASLTMHEALPGHAWQGAYLAERNSEIHTIASLTGFGAFTEGWALYAEQLADE CCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHH VGLYKDDPFGRLGYLQAIRFRCARLVVDTGLHDKRWTREQAIQELAGATGRSVGAATSEV HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH DRYCASPGQACAYKVGHNEIVRLREKAKAALGPKFDLRDFNDAVVSTGGTPLAVLETVVD HHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHH RYVAEAKA HHHHHCCC >Mature Secondary Structure MHASRRQLLLSALAAGVSTTLPLRALAAPGAVADPRLSALLDAFVDEILRASPLTATSLG CCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCC LDKGAYAALKRRLDDRSAEGRRREIAAYADRARRLRAIPRGGLSGRDLTVYDTVLYAMDV CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHC GAEGGRFAYGQDYANPYVVSQQDGTVAITPEFLNSQHLIETREDAEAYLARLEQMGAAID CCCCCCEECCCCCCCCEEEECCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHC AETARMADAAGQGVIPPAFILATTLKQLTDARAPEPGSARMVTSLAERAKAKGLEGDWRG HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC RATAIVAQKVYPAIDRQIAGVKALQPRATNDAGVWKFKDGADYYRWALKYNTTTDLTPAE CHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCHHH IHEIGLRQGREIDALMDGILKSQGLSQGTVGERMSALTKDPRFLYPNTEAGKREVVEYIQ HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEECCCCCCHHHHHHHHHH AKVDEIRPFIPQFSKLGLKAPVEVRPVPKEIEAGAALGYMNFAALDGSRPAIYYVNLSDT HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHCCHHHEEECCCCCEEEEEEECCC SNWPRYTLASLTMHEALPGHAWQGAYLAERNSEIHTIASLTGFGAFTEGWALYAEQLADE CCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHH VGLYKDDPFGRLGYLQAIRFRCARLVVDTGLHDKRWTREQAIQELAGATGRSVGAATSEV HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH DRYCASPGQACAYKVGHNEIVRLREKAKAALGPKFDLRDFNDAVVSTGGTPLAVLETVVD HHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHH RYVAEAKA HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA