| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is crp [C]
Identifier: 197104177
GI number: 197104177
Start: 780012
End: 780707
Strand: Direct
Name: crp [C]
Synonym: PHZ_c0711
Alternate gene names: 197104177
Gene position: 780012-780707 (Clockwise)
Preceding gene: 197104170
Following gene: 197104179
Centisome position: 19.52
GC content: 76.72
Gene sequence:
>696_bases ATGGCCATTGGAGAGGGTGAGCCGCTGGAGCGGATCGCCGCGGCGCTGGCGCGCGGCGAGGTGTTGGGCCTGCTCCCGGA AGAGGCCCGGCGGCGGCTGGCCCGGACCGGCGCGCCCGTCGATCTCATCCCCGGCGAGTTGCTCTGCCAAGCCGGCGATC CCGGCGATGCGGTCTATGTGATCCTCGACGGCGAACTGGAGGTCCGGCGCCTTTCGGCCGCCGGCCGCGAGCTGCGGCTC GTGGCCCTTGGCCCCGGCGCGCTGGCGGGCGAGATGGCGGTGCTGGACGGGGGCGCGCGCTCGGCGGACATCGTCGCCAG CCGGCGCGCGCATCTGTGGCGCGTGCCCCGCCAGGCCCTGCTGGAGGCGCTGGAGGCCGAGCCCCGCGCGCTGCTCGCGC TGGTGGCCGAGCTCAGCCGCCGGCTCCGCGCCGTCAACGCCGCCCTCGAGGCGCGCAGCACCCTCGATCTCGGCGGCCGC CTGGCCGGACTCCTGATGGCCGAACAGACCGGCCGGGGCCTCGTGCCGCTCAGCCAGGGCGAGCTGGCGCGCCGCCTGGG CGCCTCGCGCGAGAAGGTGAACCGCAAGCTCAGGGAATGGAGCGCCTCCGGCTGGGTGGAGACGACGCCGGCCGGCCTGC GCATCCTGGGCGAGACGCGGCTGCGCGCGCTCTCGGCGGGTCCGTGGTCGGCCTGA
Upstream 100 bases:
>100_bases TCCTGCTGGCCCGCCGCGGCCGCTGATCGCCACTCCGCCGGCTCCCGGGCCGTGCTATGATGGCCCGGGAGCTGGGGCCT TGCCGTTCGTGGAGGCGGGC
Downstream 100 bases:
>100_bases TCGCGTCCCGAGCACCCAATGTTAAGCGGGGTCGGCGGCAAGCGGCGCCATGATGGACCAGTGCATCCAGGAGCCCGCCC ATGCCCATGTACGAGGCCTA
Product: transcriptional regulator, Crp/Fnr family
Products: NA
Alternate protein names: Crp/Fnr Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Catabolite Gene Activator; Cyclic AMP Receptor Protein; CRP Family Transcriptional Regulator; Transcriptional Regulatory Protein Crp Family; Transcriptional Regulator Crp; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAIGEGEPLERIAAALARGEVLGLLPEEARRRLARTGAPVDLIPGELLCQAGDPGDAVYVILDGELEVRRLSAAGRELRL VALGPGALAGEMAVLDGGARSADIVASRRAHLWRVPRQALLEALEAEPRALLALVAELSRRLRAVNAALEARSTLDLGGR LAGLLMAEQTGRGLVPLSQGELARRLGASREKVNRKLREWSASGWVETTPAGLRILGETRLRALSAGPWSA
Sequences:
>Translated_231_residues MAIGEGEPLERIAAALARGEVLGLLPEEARRRLARTGAPVDLIPGELLCQAGDPGDAVYVILDGELEVRRLSAAGRELRL VALGPGALAGEMAVLDGGARSADIVASRRAHLWRVPRQALLEALEAEPRALLALVAELSRRLRAVNAALEARSTLDLGGR LAGLLMAEQTGRGLVPLSQGELARRLGASREKVNRKLREWSASGWVETTPAGLRILGETRLRALSAGPWSA >Mature_230_residues AIGEGEPLERIAAALARGEVLGLLPEEARRRLARTGAPVDLIPGELLCQAGDPGDAVYVILDGELEVRRLSAAGRELRLV ALGPGALAGEMAVLDGGARSADIVASRRAHLWRVPRQALLEALEAEPRALLALVAELSRRLRAVNAALEARSTLDLGGRL AGLLMAEQTGRGLVPLSQGELARRLGASREKVNRKLREWSASGWVETTPAGLRILGETRLRALSAGPWSA
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24484; Mature: 24352
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS00888 CNMP_BINDING_1 ; PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIGEGEPLERIAAALARGEVLGLLPEEARRRLARTGAPVDLIPGELLCQAGDPGDAVYV CCCCCCCCHHHHHHHHHCCHHEECCCHHHHHHHHHCCCCCEECCHHHEECCCCCCCEEEE ILDGELEVRRLSAAGRELRLVALGPGALAGEMAVLDGGARSADIVASRRAHLWRVPRQAL EECCCCHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHH LEALEAEPRALLALVAELSRRLRAVNAALEARSTLDLGGRLAGLLMAEQTGRGLVPLSQG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH ELARRLGASREKVNRKLREWSASGWVETTPAGLRILGETRLRALSAGPWSA HHHHHHCCCHHHHHHHHHHHCCCCCEEECCCHHEEECHHHHHHCCCCCCCC >Mature Secondary Structure AIGEGEPLERIAAALARGEVLGLLPEEARRRLARTGAPVDLIPGELLCQAGDPGDAVYV CCCCCCCHHHHHHHHHCCHHEECCCHHHHHHHHHCCCCCEECCHHHEECCCCCCCEEEE ILDGELEVRRLSAAGRELRLVALGPGALAGEMAVLDGGARSADIVASRRAHLWRVPRQAL EECCCCHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHH LEALEAEPRALLALVAELSRRLRAVNAALEARSTLDLGGRLAGLLMAEQTGRGLVPLSQG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH ELARRLGASREKVNRKLREWSASGWVETTPAGLRILGETRLRALSAGPWSA HHHHHHCCCHHHHHHHHHHHCCCCCEEECCCHHEEECHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA