Click here to switch to the map view.

The map label for this gene is xcsJ [H]

Identifier: 197104126

GI number: 197104126

Start: 711834

End: 712421

Strand: Direct

Name: xcsJ [H]

Synonym: PHZ_c0660

Alternate gene names: 197104126

Gene position: 711834-712421 (Clockwise)

Preceding gene: 197104125

Following gene: 197104127

Centisome position: 17.81

GC content: 75.0

Gene sequence:

>588_bases
ATGAAGGGCTTCACCCTTGTCGAGATGATGGTCGCGCTGCTGATCTTCGGCCTGGTCGCGGCGGCGGGCGTCGCGATCAT
GCGTTTCAGCGTCGACAACCAGCAGGTCGTCCGCGCCCACACGCACCGGCTGGCCGAGCTGCAGCGCGCGCGGGCGATGC
TGAAGGCCGACCTCGCCCAGGCGGCGCAGCGGCCGGTGCGCGATGCGGCCGGCCGGCCGGCCCTGCGCAGCTTCTCGGGC
GGCGAGCAGCGGACGGGCGGGCCCCTCCTGGCGCTGGTCCGGCGCGGCTGGGACAATCCCGACGCCGATCCGCGCGCCTC
GCTGCAGACGGTCGAGTACCGGCTGAACGGCGGCCGGCTGGAACGCCGCGCGCGGCCGGCCCTGGACGGCGCCGAGCTCG
GCCCGCCGCAGGTCCTGCTGAGCGGGGTGCGGGACGCCCGGGTGGCGTTCCTCGTCCGCGGACAGTGGATCGAGGCCCTG
CCGAACGGGCCGCGCCAGCCGCTGCCCCAGGCGGTGCGCCTGGACCTGACGCTGGAGGACTACGGCGAGCTCTCGCAGCT
CTTCCTGGTGACGGGAGAGCCGGCATGA

Upstream 100 bases:

>100_bases
GGGTGAGCGCGGCGGGGGAGGGGATGCTGCGGGTGGACGTCCGCGTCGCAGGTCCCGGCGACCGCACGGCGGGCGAGGTC
ACCGCCTTCCGGGGGCCGCC

Downstream 100 bases:

>100_bases
GGCGGCGGAGTGAGGAGCGGGGCGTGGCGCTGCTGTCGGTGCTGCTGCTGGTGGCGGTGATGTCGGTGATGGCGGTGACG
GTGCTGGACGAGATCCGCTT

Product: type II secretion system protein J

Products: NA

Alternate protein names: Cholera toxin secretion protein epsJ [H]

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKGFTLVEMMVALLIFGLVAAAGVAIMRFSVDNQQVVRAHTHRLAELQRARAMLKADLAQAAQRPVRDAAGRPALRSFSG
GEQRTGGPLLALVRRGWDNPDADPRASLQTVEYRLNGGRLERRARPALDGAELGPPQVLLSGVRDARVAFLVRGQWIEAL
PNGPRQPLPQAVRLDLTLEDYGELSQLFLVTGEPA

Sequences:

>Translated_195_residues
MKGFTLVEMMVALLIFGLVAAAGVAIMRFSVDNQQVVRAHTHRLAELQRARAMLKADLAQAAQRPVRDAAGRPALRSFSG
GEQRTGGPLLALVRRGWDNPDADPRASLQTVEYRLNGGRLERRARPALDGAELGPPQVLLSGVRDARVAFLVRGQWIEAL
PNGPRQPLPQAVRLDLTLEDYGELSQLFLVTGEPA
>Mature_195_residues
MKGFTLVEMMVALLIFGLVAAAGVAIMRFSVDNQQVVRAHTHRLAELQRARAMLKADLAQAAQRPVRDAAGRPALRSFSG
GEQRTGGPLLALVRRGWDNPDADPRASLQTVEYRLNGGRLERRARPALDGAELGPPQVLLSGVRDARVAFLVRGQWIEAL
PNGPRQPLPQAVRLDLTLEDYGELSQLFLVTGEPA

Specific function: Required for secretion of cholera toxin through the outer membrane [H]

COG id: COG4795

COG function: function code U; Type II secretory pathway, component PulJ

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP J family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010055
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 21247; Mature: 21247

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGFTLVEMMVALLIFGLVAAAGVAIMRFSVDNQQVVRAHTHRLAELQRARAMLKADLAQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAQRPVRDAAGRPALRSFSGGEQRTGGPLLALVRRGWDNPDADPRASLQTVEYRLNGGRL
HHHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHEEECCCHH
ERRARPALDGAELGPPQVLLSGVRDARVAFLVRGQWIEALPNGPRQPLPQAVRLDLTLED
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHEEECCHHH
YGELSQLFLVTGEPA
HHHHHHEEEEECCCC
>Mature Secondary Structure
MKGFTLVEMMVALLIFGLVAAAGVAIMRFSVDNQQVVRAHTHRLAELQRARAMLKADLAQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAQRPVRDAAGRPALRSFSGGEQRTGGPLLALVRRGWDNPDADPRASLQTVEYRLNGGRL
HHHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHEEECCCHH
ERRARPALDGAELGPPQVLLSGVRDARVAFLVRGQWIEALPNGPRQPLPQAVRLDLTLED
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHEEECCHHH
YGELSQLFLVTGEPA
HHHHHHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]