| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is xcsI
Identifier: 197104125
GI number: 197104125
Start: 711475
End: 711837
Strand: Direct
Name: xcsI
Synonym: PHZ_c0659
Alternate gene names: NA
Gene position: 711475-711837 (Clockwise)
Preceding gene: 197104124
Following gene: 197104126
Centisome position: 17.8
GC content: 76.86
Gene sequence:
>363_bases ATGCCGGCGCGCGCTGAACAGGGCTTCACCCTGCTGGAGATGCTGGTCGCCATGGCGGTGCTGAGCCTCGGCGCGCTCGC CCTGCTGAACCTCGCCGGGGAGAACACGCGGACGGCGGGGGCGCTGGAGCAGCGCTTCTTCGCCTCTGTGGTGGCCGAGA ACCGGGCCGTCGAGGCCCTGACGGCGCCCGCCCCGCCGGCGCTGGGCGAGGAGCGCGGGGCCGACCGGGCGGGACGCGAG ACCTGGCGCTGGACACGGCGGGTGAGCGCGGCGGGGGAGGGGATGCTGCGGGTGGACGTCCGCGTCGCAGGTCCCGGCGA CCGCACGGCGGGCGAGGTCACCGCCTTCCGGGGGCCGCCATGA
Upstream 100 bases:
>100_bases TTCGACGTCACCGGCGCGGCCGGGCCCACCGAGATCCGACTGTCGAACGGGACGCGCAGCGTGCGCGTCGTGGTGGACGC TGCGGGCGAGAGCCAGATCC
Downstream 100 bases:
>100_bases AGGGCTTCACCCTTGTCGAGATGATGGTCGCGCTGCTGATCTTCGGCCTGGTCGCGGCGGCGGGCGTCGCGATCATGCGT TTCAGCGTCGACAACCAGCA
Product: type II secretion system protein I
Products: NA
Alternate protein names: Type II Secretion Pathway Protein I
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MPARAEQGFTLLEMLVAMAVLSLGALALLNLAGENTRTAGALEQRFFASVVAENRAVEALTAPAPPALGEERGADRAGRE TWRWTRRVSAAGEGMLRVDVRVAGPGDRTAGEVTAFRGPP
Sequences:
>Translated_120_residues MPARAEQGFTLLEMLVAMAVLSLGALALLNLAGENTRTAGALEQRFFASVVAENRAVEALTAPAPPALGEERGADRAGRE TWRWTRRVSAAGEGMLRVDVRVAGPGDRTAGEVTAFRGPP >Mature_119_residues PARAEQGFTLLEMLVAMAVLSLGALALLNLAGENTRTAGALEQRFFASVVAENRAVEALTAPAPPALGEERGADRAGRET WRWTRRVSAAGEGMLRVDVRVAGPGDRTAGEVTAFRGPP
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12644; Mature: 12512
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARAEQGFTLLEMLVAMAVLSLGALALLNLAGENTRTAGALEQRFFASVVAENRAVEAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHH TAPAPPALGEERGADRAGRETWRWTRRVSAAGEGMLRVDVRVAGPGDRTAGEVTAFRGPP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEECCCCC >Mature Secondary Structure PARAEQGFTLLEMLVAMAVLSLGALALLNLAGENTRTAGALEQRFFASVVAENRAVEAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHH TAPAPPALGEERGADRAGRETWRWTRRVSAAGEGMLRVDVRVAGPGDRTAGEVTAFRGPP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA