Click here to switch to the map view.

The map label for this gene is yrkF [H]

Identifier: 195952698

GI number: 195952698

Start: 279867

End: 280178

Strand: Direct

Name: yrkF [H]

Synonym: HY04AAS1_0320

Alternate gene names: 195952698

Gene position: 279867-280178 (Clockwise)

Preceding gene: 195952696

Following gene: 195952699

Centisome position: 17.95

GC content: 37.82

Gene sequence:

>312_bases
ATGTTTAATATACCAGAGATTACACCTGAAGAAGCTAAGAAGATATTGGAATCAGATCCAAACGCTGTACTTTTGGATGT
AAGGACGCCTCAAGAGTATAGACAGATAAGGGTACCGGGTAGTGTGCTAATACCGGTGGATGATCTTAGGTTTAAGTTTA
AAGAGCTTGATAAGAACAAGAAGTATATTGTAATGTGTAGAAGTGGAAACAGAAGCGCTTTTGCCACTTACGCTTTGAGA
CAGCTTGGTTTTGATGCTTTTAATATGATAGGTGGTATATTAAATTGGCCTTACGAAACAGAAAGAGGCTAA

Upstream 100 bases:

>100_bases
ATGAAATCTGCATATTTTGGTTTAAAATATTTTATTTATCAGATTGATTTATTGTGGCTTTAGGTATATTATAATATTTG
AAATTGGAGGTTTAATGTGG

Downstream 100 bases:

>100_bases
TATGAAATATATAATAGAAGCCCAAAACATAAAAGATACATACAAAACTATATTAAATAGGGCTAAAGAGTTTAAGGAAA
AAAGGATATATCCCACTTAC

Product: Rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MFNIPEITPEEAKKILESDPNAVLLDVRTPQEYRQIRVPGSVLIPVDDLRFKFKELDKNKKYIVMCRSGNRSAFATYALR
QLGFDAFNMIGGILNWPYETERG

Sequences:

>Translated_103_residues
MFNIPEITPEEAKKILESDPNAVLLDVRTPQEYRQIRVPGSVLIPVDDLRFKFKELDKNKKYIVMCRSGNRSAFATYALR
QLGFDAFNMIGGILNWPYETERG
>Mature_103_residues
MFNIPEITPEEAKKILESDPNAVLLDVRTPQEYRQIRVPGSVLIPVDDLRFKFKELDKNKKYIVMCRSGNRSAFATYALR
QLGFDAFNMIGGILNWPYETERG

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001455 [H]

Pfam domain/function: PF00581 Rhodanese; PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 11896; Mature: 11896

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNIPEITPEEAKKILESDPNAVLLDVRTPQEYRQIRVPGSVLIPVDDLRFKFKELDKNK
CCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHEEECCCEEEEEHHHHHHHHHHCCCCC
KYIVMCRSGNRSAFATYALRQLGFDAFNMIGGILNWPYETERG
CEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFNIPEITPEEAKKILESDPNAVLLDVRTPQEYRQIRVPGSVLIPVDDLRFKFKELDKNK
CCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHEEECCCEEEEEHHHHHHHHHHCCCCC
KYIVMCRSGNRSAFATYALRQLGFDAFNMIGGILNWPYETERG
CEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]